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Applied and Environmental Microbiology, April 2007, p. 2690-2696, Vol. 73, No. 8
0099-2240/07/$08.00+0 doi:10.1128/AEM.02649-06
Copyright © 2007, American Society for Microbiology. All Rights Reserved.
,
Yaxin Li,1
Thomas J. Burr,1
H. C. Hoch,1* and
Mingming Wu2*
Department of Plant Pathology, New York State Agricultural Experiment Station, Cornell University, Geneva, New York 14456,1 Sibley School of Mechanical and Aerospace Engineering, Cornell University, Ithaca, New York 148532
Received 13 November 2006/ Accepted 26 January 2007
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Together, the two classes of pili function, in part, to attach X. fastidiosa cells to their environmental substrata as well as to each other. From the work of Meng et al. (15) and others (10, 23) it is apparent that biofilm development in X. fastidiosa is highly reliant upon the presence of type I pili, as was previously shown for Escherichia coli (17). While type IV pili may also have a role in biofilm formation, their primary activity appears to be associated with motility (14). Similarly, it is well established that type IV pili mediate twitching motility in other bacteria such as P. aeruginosa, Neisseria gonorrhoeae, and Myxococcus xanthus (14). Type I pili, best studied in Escherichia coli, are associated with attachment of cells to substrata and development of biofilms (17, 22). Adhesion to substrata by X. fastidiosa as well as by other bacterial species can also occur through the activity of afimbrial adhesins present on the cell surface (6, 9, 11, 19, 20); however, the pili of X. fastidiosa appear to often keep the bacterial cell surface from making intimate contact with the substratum, at least initially. Thus, contact with and adhesion of X. fastidiosa to substrata via pili are crucial for establishing spread and colonization. It is important, then, to better understand the role of both types of pili, together and separately, in contributing to the adherence of X. fastidiosa to various substrata.
Traditionally, bacterial adhesion has been measured in commercially available parallel-plate flow chambers (2, 19, 20). Using such chambers, Thomas et al. (19, 20) demonstrated that the adhesion force generated by type I pili (fimbrae) can increase 10-fold in the presence of an external shear force. Recently, laser tweezers and atomic force microscopy (AFM) were used to investigate forces generated by single and multiple pili (13, 21). Using these approaches, Sheetz and coworkers (13, 16), and Touhami et al. (21) determined that the forces generated by a single type IV pilus of N. gonorrhoeae and P. aeruginosa exceed 100 pN and 95 pN, respectively. The extension and retraction dynamics of type IV pili of P. aeruginosa was assessed by Skerker and Berg (18); in their experiments, they were able to monitor these activities by fluorescently labeling pili and capturing their movement microscopically. While both laser tweezer and AFM methods offer advantages in assessment of the adhesion force of individual bacteria or even a single pilus, these are difficult procedures and rather time consuming, making it difficult to obtain many data measurements. The parallel-plate flow chamber allows for examining many bacteria at the same time, although the relatively large size of the chamber does not allow for detailed microscopic examination of the dynamics of the bacteria subjected to a flow at single-cell resolution.
We report herein on the use of a microfluidic chamber designed to assess drag forces required to evaluate adhesiveness of X. fastidiosa to substrata (in this case, glass). Importantly, we were able to uniquely relate the adhesiveness of bacterial cells to the kind of pili (type I and/or type IV pili) present by comparing a wild-type (WT) strain which has both types of pili with mutants deficient with respect to genes expressing either type I or type IV pili.
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FIG. 1. Illustration of Xylella fastidiosa strains with associated pili. The WT Temecula isolate possess both the shorter type I and longer type IV pili. fimA null cells (fimA) (mutant 6E11) possess only type IV pili, and pilB null cells (pilB) possess only type I pili.
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FIG. 2. Schematic of the basic microfluidic chamber design. Microfluidic channels were 80 µm wide, 50 µm in depth, and 3.7 cm in length.
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All experiments were conducted at room temperature (ca. 22°C). For each set of experiments, the time between microfluidic chamber assembly and cell adhesion experiments, the tubing lengths, and the age of the cell cultures were kept as constant as possible. Each experiment was repeated three times using the side-by-side microfluidic chambers (Fig. 2); one of three different cell types, i.e., X. fastidiosa WT cells, fimA null cells, or pilB null cells, was placed in one of the paired chambers, and another of the cell types was placed in the other chamber. In addition, the experiment was repeated three times using the microfluidic chamber that was previously described by Meng et al. (15).
Microscopy and image analysis.
Microscopic observation of bacterial cell activities were assessed in the microfluidic chambers mounted on an inverted Olympus IMT-2 microscope using 40x phase-contrast optics. Time-lapse images were recorded with a SPOT-RT digital camera (Diagnostic Instruments, Inc., Sterling Heights, MI) controlled with MetaMorph Image software (Universal Imaging Corp., Downington, PA). Displacement of X. fastidiosa cells during the course of experimentation, viz., as the medium flow rate was increased, was recorded by capturing images every 5 s (= 13 images for each flow rate). The number of cells on each frame was scored using MetaMorph, and a number averaged from these 13 images was used as the number of cells attached at a specific flow rate. Cells were enumerated in a region comprising two-thirds of the channel width (avoiding boundary effects of channel side walls) and the full length of the channel captured in the image, viz., 53 µm by 280 µm.
Statistical analysis.
Experiments in which the drag force required to remove attached cells was determined ("adhesion force" experiments) were repeated six times. Highest and lowest adhesion force values for each bacterial strain treatment were discarded, providing trimmed means used for analysis. On the basis of assumption of equal population variances for each treatment, pair-wise trimmed t tests (25) were performed (P = 0.05).
Fluid dynamics and exerted forces on adherent cells. (i) Microfluidic channel design.
Relevant shear stress values are first determined by assessing the relation of shear stress S, volume flow rate Q, and pressure drop
P across the inlet and outlet of the channel by use of the Poseuille flow model (1). According to the analytical solution of a flow profile in a square channel, the shear stress at the bottom of the channel is given by S = 6 µQ/h2w, where µ is the viscosity of the water and h is the height and w the width of the channel. The pressure across the inlet and outlet of the channel is given by
P = 2SL/h, where L is the length of the channel. The analysis described above shows that a high shear stress can be achieved by decreasing the thickness of the channel h; however, h can not be arbitrarily small, as the pressure across the inlet and outlet of the channel will rise. Also, it is noted that in the Poiseuille flow model, a large aspect ratio (w/h) is assumed in which the flow velocity variation along the width w is ignored. This model provides an accuracy of
5% in comparison to the results from three-dimensional numerical simulations, given exact boundary conditions (12) for a large-aspect-ratio channel (w/h > 50). Note that the formula presented above is used only as the designing principle of this study and is an estimate of shear stresses at the bottom (surface) of the channel.
(ii) Computation of total drag force exerted on a bacterium.
When a bacterium is attached to the surface of a flow chamber, the fluid flow exerts a shear stress as well as a pressure difference on the bacterium. The total force exerted on the bacterium by the flow is called the drag force (F) (contributed by both shear stress and pressure difference). To obtain a relationship between the drag force F and the volume fluid flow rate Q, we computed the drag force exerted on a bacterium by use of the exact channel geometry as employed in our experiments. A computation fluid dynamics software package, Fluent (Fluent Inc., Lebanon, NH), was employed for this purpose. Figure 3 describes the general setup for the numerical experiment, in which it was assumed that the bacterium had a capsule shape, a radius of 0.25 µm, and an end-to-end length of 1.90 µm and that it was located in the center and bottom of the channel. We chose the mesh size that resulted in a velocity field that was within 5% of its convergent value. In addition, we verified our code by solving a problem with a known analytical solution. The drag force of a rod in the center of the channel is F = 4
LU/[ln(L/R) 0.5], where L is the length of the rod, R is the radius of the rod, and U is the velocity of the fluid flow along the center line of the bacterium (7). The total drag force exerted on the bacterium was then computed at various flow rates. The relationship between the drag force exerted on a bacterium in the center and bottom of the channel and the flow rate is shown in Fig. 4. Drag force was computed using F = 3.17Q, where Q is the flow rate. This relationship is computed for a channel width of 100 µm; for the experiments using channels with 80-µm widths, we estimated a 20% increase in drag force and thus used the relation F = 3.80Q. Two approximations were employed here: first, it was assumed that the cell body was prostrate and in contact with the substratum. Such close contact occurs as the bacteria are subjected to a strong unidirectional flow before they are moved or detached. Second, it was assumed that the drag force on a bacterium in the center two-thirds of the channel is the same as that on a bacterium in the median center of the channel. This assumption leads to a slight overestimate of our drag force; however, the uniformity with which the cells detach from the substratum in the center two-thirds of the channel justifies this assumption.
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FIG. 3. Schematic illustration of the experimental design used for numerical computation. The flow field was simulated using Fluent computation fluid dynamics software. The simulation box was 100 µm wide, 50 µm deep, and 150 µm long. The model bacterium attached to the channel surface was 0.5 µm in diameter and 1.90 µm in length.
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FIG. 4. Calibration curve generated by varying the flow rate in a test channel with total drag force exerted on the model bacterium (Fig. 3). Data points result from numerical calculations; the line represents a fit to a linear function.
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Influence of flow on cell attachment.
Under no-flow or very-low-flow conditions, the orientation of many X. fastidiosa cells was observed to be more or less perpendicular to the substratum, with the cells being attached at the pilus-bearing pole. This cell orientation was readily noted in the form of spherical cellular shapes, since the rod-shaped cells were observed "on end." As medium flow was increased, the cells, remaining attached by the one pole, gradually became oriented (leaning) with the direction of flow. In most instances, under increased flow conditions they appeared to be nearly prostrate with respect to the substratum. Upon further increases in flow rate, one of two distinct events was observed: (i) cells abruptly detached from the substratum and were washed downstream (and did not appear in subsequently captured images), or (ii) cells were dragged downstream on the glass surface and slid from the field of view or, sometimes, detached (Fig. 5). The former scenario was observed for most of the WT and fimA null cells, while the latter scenario always occurred for pilB null cells and sometimes for WT cells. Movies of both processes can be viewed in the supplemental material as well as at http://www.nysaes.cornell.edu/pp/faculty/hoch/movies/.
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FIG. 5. Image sequences depicting detachment of Xylella fastidiosa wild-type Temecula isolate cells (WT), fimA null cells (fimA) (type IV pili only), and pilB null cells (pilB) (type I pili only) from the microfluidic chamber surface. The results for three cells are demarcated (in a rectangle, an oval, and a circle) for each of the three cell types (with one cell type shown per column) in the frames in the first row to indicate the results seen at a flow rate of 2 µl min1 (or at a shear stress of 8 dyn/cm2). At 90 µl min1 (or at a shear stress of 360 dyn/cm2) one each of the WT and fimA null cells (oval) detached, and all three of the mutant pilB null cells were dragged downstream. At 220 µl min1 (or at a shear stress of 880 dyn/cm2) few WT and no fimA null cells remained attached whereas significantly more pilB null cells remained attached, albeit displaced in position downstream. Flow direction is represented from left to right.
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FIG. 6. Numbers of Xylella fastidiosa cells adherent to the microfluidic chamber surface as a function of the flow rate. Data represent the results observed for X. fastidiosa WT cells, fimA null cells (fimA), and pilB null cells (pilB).
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FIG. 7. Fraction of the cells detached from the microfluidic chamber surface as a function of the drag force. The fraction of cells is defined as follows: fraction = [(number of cells at a given flow rate number of cells at a lower consecutive flow rate)/number of cells at the lowest flow rate in the middle two-thirds of the channel]. The plot is derived from the data presented in Fig. 6. The drag force was calculated using the relation F = 3.80Q for channel width 80 µm and F = 3.17Q for channel width 100 µm, where Q is the flow rate. fimA, fimA null cells; pilB, pilB null cells.
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FIG. 8. Adhesion force of Xylella fastidiosa WT strain cells and pilus-defective mutants (fimA, fimA null cells; pilB, pilB null cells). The different letters on the bars correspond to statistical significant differences according to pair-wise trimmed t test results (P = 0.05). Error bars, standard deviations.
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Over the course of the experiments using different mutants of X. fastidiosa, clear behavioral differences that were dependent on the pilus type present were observed. Furthermore, the results for some of the mutants were far more consistent and reproducible with respect to the way in which they interacted with the substratum. For example, the results obtained with fimA null cells (with type IV pili only) were the most reproducible, with adhesion force values between 101 and 202 pN (
= 101 pN). On the other hand, the results observed with pilB null cells (type I pili only) were the most variable, with adhesion force values between 114 and 418 pN (
= 304 pN). WT results ranged between 44 and 247 pN (
= 203 pN). There were also clear differences in how these different mutants and the wild-type cells interacted with the substratum. Wild-type and fimA null cells, for the most part, abruptly detached from the substratum when the shear force exceeded their ability to remain attached. In a few instances the wild-type cells "slid" for short distances on the substratum with the direction of flow before abruptly detaching. pilB null cells, however, were exceptionally consistent in exhibiting a sliding behavior along the substratum and rarely became detached even at higher shear forces. This observation led us to conclude that type I pili are primarily responsible for the "anchorage" of the cells to the surface in a fast-flowing environment; this anchorage may be a strategy for survival in the sap flow of plants. This is supported by other studies indicating that this mutant develops robust and abundant biofilms whereas fimA null cells produce essentially no biofilm and only loose aggregates of cells in liquid media (5, 10). Why do the wild-type cells with both types of pili adhere less strongly than those with only short type I pili (Fig. 5)? We hypothesize that the presence of the longer type IV pili somehow physically obstructs maximum contact of short pili with the substratum. Also, the type IV pili are dynamicconstantly extending and retracting, keeping the cell in motion. This also possibly keeps wild-type cells from achieving maximum contact.
The value (108 pN) for adhesion of type IV pili to substrata seen with X. fastidiosa with fimA null cell characteristics is similar to those reported for other bacterial species as determined utilizing different approaches. Maier et al. (13) determined a "stall" force of 110 pN for type IV pili in N. gonorrhoeae in experiments performed using laser tweezers; recently, Touhami et al. (21) determined an adhesion force of 95 pN for type IV pili of P. aeruginosa in experiments performed using AFM. It is noted that both N. gonorrhoeae and P. aeruginosa lack type I pili; thus, only the values of the X. fastidiosa fimA null cells are applicable for comparison. Such closeness in values reflects upon the utility of the three methods of measurement and may also relate to the conserved structure of the pilus and function among diverse bacterial species. Our approach considered the bacterial cell and all appendages (pili) as a whole, while other researchers used a single pilus to measure the adhesion force (13, 21). We did not determine the number of type IV pili that attached individual cells to the substratum, in part because this value is not easily determined. The closeness of the adhesion force values for X. fastidiosa to the values observed in other studies (13, 21) may indicate that a single pilus, or at most a few pili, are involved in the attachment with the substratum at any given time; however, this hypothesis needs to be further investigated. One would expect that the adhesion force would increase with the number of pili attached to a substratum.
Factors other than type I and type IV pili have roles in cell attachment to substrata. Genome sequence data (23) and work by other researchers (6) show that the X. fastidiosa WT strain possesses an array of nonfimbrial adhesins present on the cell surface. These data are supported by our preliminary observations (unpublished results) showing that a double mutant lacking both types of pili still attaches to the substratum, albeit such mutants required longer durations and conditions of no flow or very slow to medium flow to achieve any significant degree of attachment.
We have presented the results of a comparative study in which the adhesion forces of type I and type IV pili were assessed using two mutant strains and a wild-type isolate of X. fastidiosa. The unique dual-pilus composition of the wild-type X. fastidiosa strain presented an opportunity to study the characteristics of the two types of pili comparatively in the same experimental setting. This study demonstrated that microfluidic chambers provide an accurate and easy system with which to measure adhesion force of bacterial cells. Insights gained during this study will lead to a better understanding of the roles played by type I and type IV pili in bacterial cell attachment to surfaces in nature.
We thank David Caughey for his assistance with numerical calculations of the drag force, Lauren Reese for her help with this project, and John Barnard for his help with the statistical analysis.
Published ahead of print on 9 February 2007. ![]()
Supplemental material for this article may be found at http://aem.asm.org/. ![]()
Present address: Department of Biomedical Engineering, Stony Brook University, Stony Brook, NY 11794-2580. ![]()
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