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Applied and Environmental Microbiology, August 2008, p. 4671-4679, Vol. 74, No. 15
0099-2240/08/$08.00+0 doi:10.1128/AEM.00103-08
Copyright © 2008, American Society for Microbiology. All Rights Reserved.

,
Girbe Buist,
,
Naomi E. Kramer,
Ruud Jalving,
Germaine F. J. D. Benus,
Gerard Venema,
Oscar P. Kuipers, and
Jan Kok*
Department of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands
Received 13 January 2008/ Accepted 10 May 2008
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The PG hydrolases of L. lactis are modular enzymes that are composed of a signal sequence, an active-site domain, and a (putative) cell wall binding domain (21, 45). AcmA is the best-studied enzyme: the mature form comprises an N-terminal N-acetyl glucosaminidase active site (43) and a C-terminal domain that consists of three lysin motif (LysM) modules (8). The enzyme binds to PG in the lactococcal cell wall in a noncovalent manner via its LysM-containing domain (42, 44). Binding of AcmA has also been shown to occur intercellularly; that is, AcmA produced by and liberated from one cell can bind to and lyse another cell (7).
To control the function of these potentially suicidal enzymes, both the expression and activity of cell wall hydrolases are well regulated. Expression of the genes is low and growth phase dependent (7, 21, 45). The different enzymes have different pH dependencies: AcmD and YjgB are active at a pH of around 4, AcmC is active below pH 7, and AcmA has been shown to be active below pH 10 (21, 45). AcmA is subject to proteolytic degradation by the extracellular lactococcal proteases PrtP and HtrA, resulting in reduced activity and/or reduced wall binding (6, 8, 34, 42, 43). Recently, it has been shown that modification of the PG may also be a manner to control the activity of AcmA. Veiga et al. (48) showed that increased O-acetylation of the PG of L. lactis results in resistance against AcmA, possibly by reduced binding of AcmA. De-N-acetylation of lactococcal PG did not affect the binding of AcmA (31). Secondary cell wall polymers such as S-layer proteins and lipoteichoic acids (LTAs) regulate the activity of AcmA by hindering its binding to PG (44). Although PG is present all over the lactococcal cell surface, AcmA binds only at specific sites on the lactococcal cell, predominantly around the septum and poles (44). When cells are boiled in trichloroacetic acid (TCA) and AcmA is subsequently added from the outside, AcmA binding occurs at the whole cell surface. A component that can be extracted from the cell wall by the TCA treatment, possibly LTA, is involved in hindering AcmA binding such that AcmA binds only to the mentioned sites (44). Indeed, for L. lactis strain SK110, it was shown that its LTAs are present at the sites in the cell wall where AcmA does not bind (44). LTAs are lipid-linked carbohydrates consisting of polyglycerolphosphate in L. lactis. They are involved in the control of autolysin activity (3, 15), in determining the electrochemical properties of the cell wall (33), in establishing a magnesium ion concentration (1, 19, 22, 25), and in determining the physicochemical properties of the cytoplasmic membrane (18). In the mid-1970s it was already shown that the teichoic acid moiety of the LTA of L. lactis contains 16 to 17 glycerolphosphate units, of which around 50% are replaced with
-D-galactosyl residues (51). The glycerolphosphate was shown also to be replaced with D-alanine. Differences in the amounts of D-Ala have been reported to influence autolysis, possibly by affecting the degradation of the autolysin AcmA by the extracellular protease HtrA (42, 43).
Riepe et al. (38) observed that when the highly autolytic L. lactis subsp. cremoris strains CO and 2250 were grown in a medium containing lactose or galactose as the sole carbon source, the reduction of the optical density at 600 nm (OD600) during the stationary phase was less than when the strains were grown in a medium containing glucose. However, a molecular mechanism for this phenomenon was not described. In this paper the same phenomenon is described for L. lactis subsp. cremoris MG1363 and L. lactis subsp. lactis IL1403. We show that AcmA binding to cells grown in a medium containing galactose as the carbon source is reduced, which explains the reduced cellular autolysis observed under these specific growth conditions. The composition of the LTAs of cells grown on galactose and glucose differs considerably, which could explain the differences in autolysin binding.
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1, chloramphenicol (Sigma-Aldrich, St. Louis, MO) was added (5 µg/ml). Erythromycin (Boehringer GmbH, Mannheim, Germany) was added to a concentration of 5 µg/ml when L. lactis IL1403 (harboring the vector pGh9::ISS1) was grown at 30°C and to a concentration of 2 µg/ml when incubation was at 37°C. Escherichia coli was grown in tryptone yeast extract medium (Difco Laboratories) at 37°C with vigorous agitation or on tryptone yeast extract medium solidified with 1.5% (wt/vol) agar and containing 100 µg of erythromycin (Boehringer GmbH) per ml when required. For E. coli EC101, 40 µg/ml kanamycin (Boehringer GmbH) was used (26). All chemicals used were of analytical grade and, unless indicated otherwise, obtained from Merck (Darmstadt, Germany). |
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TABLE 1. Bacterial strains and plasmids used in this study
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Screening for transposon mutants and generation of plasmid-free derivatives.
Mutagenesis of L. lactis IL1403 with pGh9::ISS1 and isolation of stable ISS1 insertion mutants by excision of integrated vector were performed as described previously (28). Cell wall-hydrolyzing activity was visualized as a halo around colonies grown for 36 to 48 h at 37°C on GM17 plates containing 0.2% (wt/vol) autoclaved, lyophilized Micrococcus lysodeikticus ATCC 4698 cells (Sigma Chemical Co., St. Louis, MO) (26). Plasmid-free derivatives of the pGh9::ISS1 insertion mutants of L. lactis IL1403 lacking a halo were generated from an overnight culture of the mutant diluted 106-fold in fresh GM17 (without erythromycin) medium and grown for 18 h at 28°C. After growth the culture was diluted and plated onto GM17 plates to obtain single colonies. The removal of pGh9::ISS1 was verified by the absence of growth of the mutant on GM17 plates containing erythromycin.
Southern transfer, DNA hybridization, and nucleotide sequencing.
To verify single-site integration of pGh9::ISS1 and to determine the restriction sites flanking the plasmid, chromosomal DNA of selected integrants of L. lactis IL1403 acmA::pGh9::ISS1 was cut with the restriction enzymes ClaI, EcoRI, HindIII, or PstI. Separation was performed by electrophoresis in a 0.8% (wt/vol) agarose gel, and DNA was transferred to GeneScreen Plus membranes (NEN Research Products, Boston, MA) by the protocol of Southern analysis, as modified by Chomczynski and Qasba (11). Labeling of pGh9::ISS1 digested with HindIII and hybridization (at 42°C) were done with an ECL labeling and detection system according to the instructions of the manufacturer (Amersham International, Amersham, United Kingdom). The site of integration of pGh9::ISS1 was determined by rescue of the plasmid from the chromosome through digestion of chromosomal DNA of the integrants with HindIII, circularization, and introduction into E. coli EC101, with selection for erythromycin resistance. The inserts of rescued plasmids were sequenced using a Vistra Systems 725 automated fluorescent DNA sequencer (Vistra Systems Amersham Life Science Inc., Buckinghamshire, United Kingdom). Sample preparation and sequence reactions were performed with the DNA sequencing robot, the Vistra Systems DNA labstation 625, using an automated
Taq sequencing kit and the Texas-Red M13 forward primer of Amersham, according to the instructions of the supplier.
OD measurements, nisin induction, enzyme assays, and microscopy.
ODs of cultures were measured at 600 nm in a Novaspec II spectrophotometer (Pharmacia Biotech AB, Uppsala, Sweden). To produce MSA2cA protein, L. lactis NZ9000 (24) containing plasmid pNG3041 was grown in GM17 broth containing chloramphenicol at 30°C. The culture was grown until an OD600 of 0.5 was reached, after which it was induced with nisin by the addition of 1/1,000 (vol/vol) of a supernatant of a culture of the nisin-producing strain L. lactis NZ9700.
To measure the influence of the carbon source on cellular lysis, L. lactis MG1363, L. lactis MG1363 acmA
1, L. lactis IL1403, and L. lactis IL1403 acmA::ISS1 were grown in GM17 medium containing glucose (0.5%, wt/vol), galactose (0.5%, wt/vol), or a mixture of both sugars (0.25% [wt/vol] of each). Cells from 50 ml of culture of L. lactis MG1363 acmA
1 or L. lactis IL1403 acmA::ISS1 were subsequently resuspended in 50 ml of the supernatants of the L. lactis MG1363 or L. lactis IL1403 cultures and incubated at 30°C for 96 h. Subsequently, as a measure of the extent of culture lysis, X-prolyl dipeptidyl aminopeptidase (PepX) was measured using the chromogenic substrate Ala-Pro-p-nitroanilid (Bachem Feinchemicalien AG, Bubendorf, Switzerland) as described earlier (6). Briefly, after 2 min of centrifugation in an Eppendorf microcentrifuge, 75 µl of a culture supernatant was added to 50 µl of substrate (2 mM) and 75 µl of HEPES buffer (pH 7.0). The mixture was pipetted into a microtiter plate well, and color development was monitored in a THERMOmax microtiter plate reader (Molecular Devices Corporation, Menlo Oaks, CA) at 405 nm for 20 min at 37°C.
Light microscopy pictures of L. lactis MG1363 acmA
1 and L. lactis IL1403 acmA::ISS1 grown in M17 containing glucose or galactose were made by using a Zeiss microscope (Carl Zeiss, Thornwood, CA) and an Axiovison digital camera (Axion Technologies, Houston, TX). To determine the effect of AcmA on bacterial chain length, L. lactis MG1363 acmA
1 and L. lactis IL1403 acmA::ISS1 cells (pellet of 1 ml of culture) were incubated with L. lactis MG1363 or L. lactis IL1403 supernatants (supernatant of 1 ml of culture) for 30 min at 30° before microscopy. Electron microscopy was performed as described earlier (10).
Isolation and TCA treatment of cell walls and MSA2cA binding assay.
Walls of cells grown in M17 medium with glucose or galactose were isolated and treated with TCA as described before (44). MSA2cA binding studies were performed by mixing equal amounts of L. lactis cells (the amount of cells present in 1 ml of culture with an OD600 of 1.0) or cell walls (1 µg) with 1 ml of supernatant of a nisin-induced L. lactis NZ9000 acmA (pNG3041) culture, which contains the fusion protein MSA2cA (44). The suspensions were incubated at room temperature for 5 min, centrifuged (cells for 1 min at 20,000 x g and cell walls for 15 min at 20,000 x g) and washed once with M17 broth. The pellets were subsequently resuspended in sodium dodecyl sulfate (SDS) sample buffer (2), boiled for 5 min, and subjected to SDS-polyacrylamide gel electrophoresis (PAGE) (see below).
SDS-PAGE, AcmA zymograms, and Western hybridization.
AcmA activity was detected by a zymogram staining technique using SDS-polyacrylamide (12.5%) gels containing 0.15% autoclaved, lyophilized M. lysodeikticus ATCC 4698 cells (Sigma-Aldrich), as described previously (8). After electrophoresis, the gels were gently shaken at room temperature for 24 h in three to five changes of 100 ml of 25 mM Tris-HCl (pH 7) containing 1% (vol/vol) Triton X-100 for protein renaturation. Bands of lytic activity became visible as clearing zones. A prestained broad-range SDS-PAGE molecular weight marker of Bio-Rad laboratories was used as a reference. Proteins were transferred from SDS-10% polyacrylamide gels to polyvinylidene difluoride membranes (Roche Molecular Biologicals, Basel, Switzerland) as described by Towbin et al. (46) for Western hybridizations. TBST (10 mM Tris-HCl, pH 7.5, 150 mM NaCl, 0.1% Tween-20) was used as a buffer, and 5% skim milk powder in TBST was used to block membranes, usually overnight. Antibodies were added to TBST, and incubations were performed at room temperature for 1 h.
MSA2cA antigen was detected with a rabbit polyclonal anti-MSA2 antiserum diluted 10,000-fold and horseradish peroxidase-conjugated goat anti-rabbit secondary antibodies (Pharmacia, Uppsala, Sweden) using an ECL chemiluminescent detection system and protocol (Amersham, Piscataway, NJ).
LTA isolation and analyses.
LTA was isolated as follows: L. lactis IL1403 was grown overnight in 5 liters of M17 medium supplemented with 0.5% glucose or 0.5% galactose. Twenty grams (wet weight) of cells was harvested by centrifugation, resuspended in 60 ml of 0.1 M sodium citrate buffer, pH 4.8, and disrupted in three cycles of 5 min at output level 6 using a Branson sonifier (model 250 P5; Branson Corp., Danbury, CT). Between cycles the cells were kept on ice for 5 min. LTA purification was done essentially as described by Morath et al. (32). Briefly, the disrupted cells were mixed with 60 ml of n-butanol (Merck, Darmstadt, Germany), stirred for 30 min at room temperature, and centrifuged at 13,000 x g for 40 min at room temperature. The centrifugation step was lengthened to obtain a higher yield of LTA. The aquatic phase was lyophilized, filtered using a 0.22-µm-pore-size nitrocellulose membrane filter (Schleicher & Schuell, 's-Hertogenbosch, The Netherlands), resuspended in 5 ml of chromatography start buffer (15% n-propanol in 0.1 M ammonium acetate, pH. 4.7), and centrifuged at 45,000 x g for 15 min (Sorvall rotor SS34; Newtown, CT) at room temperature. The supernatant was subjected to fast-performance liquid chromatography on octyl-Sepharose CL 4B (Amersham Pharmacia Biotech), with a 15 to 60% propanol gradient.
The phosphorous content of LTA was estimated according the protocol of Rouser et al. (39). Nuclear magnetic resonance analysis was performed at 600.13 MHz (1H) and 300 K, as described by Morath et al. (32).
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FIG. 1. Schematic presentation of the insertion of the ISS1 element in acmA of L. lactis IL1403 acmA::ISS1. The nucleotide sequence on the right-hand side of the inserted ISS1 element (italicized nucleotides), determined after plasmid rescue using a HindIII digestion (see Materials and Methods), is indicated in the inset. This region is indicated as a gray box in the scheme. The amino acid sequence of part of AcmA is indicated below the nucleotide sequence.
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FIG. 2. Comparison of autolysis of L. lactis strains MG1363 ( ), MG1363 acmA 1 ( ), IL1403 ( ), and IL1403 acmA::ISS1 ( ). Cells were grown in GM17 broth, and cellular lysis was subsequently followed by measuring PepX activity (in arbitrary units[AU]) (see the Materials and Methods section) released into the culture medium in time.
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Growth of L. lactis on galactose results in lower stationary-phase lysis than when cells are grown on glucose.
Riepe et al. (38) observed that when L. lactis subsp. cremoris strains CO and 2250 were grown on a medium containing galactose as the carbon source, these strains lysed to a lesser extent than when grown on a medium containing glucose, suggesting that the carbon source influences the autolysin activity. To further investigate the effect of galactose on autolysis, L. lactis strains MG1363 and IL1403 were grown in M17 medium supplemented with 0.5% glucose, 0.5% galactose, or a mixture of both sugars (0.25% of each sugar) for 48 h. The release of the intracellular enzyme PepX in the culture supernatant was taken as a marker for cellular lysis and was followed in time. Lower PepX activities were measured after 25 and 48 h in supernatants of cultures grown on galactose than in cultures grown on glucose (Fig. 3). When both sugars were added in equal amounts to the growth medium, intermediate levels of PepX activity were observed. PepX expression is not influenced by the carbon source since cell extracts of cells grown on glucose or galactose contained equal amounts of PepX activity (results not shown).
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FIG. 3. Autolysis of L. lactis is carbon source dependent. L. lactis MG1363 (A) and L. lactis IL1403 (B) were grown in M17 medium containing (in wt/vol for each sugar) 0.5% glucose, 0.5% galactose, or a combination of 0.25% glucose plus 0.25% galactose, as indicated in the inset. Lysis was followed by measuring the PepX activity released into the culture supernatants in time. The outcome of a typical experiment is shown. Largely similar patterns were obtained in three independent experiments. AU, arbitrary units.
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Lactococcal cells grown on galactose are less susceptible to lysis by AcmA.
To further examine whether growth on glucose or galactose influences AcmA-mediated cell lysis, L. lactis MG1363 acmA
1 and L. lactis IL1403 acmA::ISS1 were grown in the presence of glucose, after which the cells were collected. The cell pellets were resuspended in spent supernatants containing AcmA from L. lactis MG1363 cultures grown on glucose, galactose, or the sugar mixture. By using this approach, the influence of degradation of AcmA in the spent supernatant by proteinases that may be secreted from the mutant cells or of lysins possibly expressed from prophages in these cells (49) was excluded as the mutant cells do not lyse (L. lactis MG1363 acmA
1) or lyse only very slightly (L. lactis IL1403 acmA::ISS1) (Fig. 2). Cellular lysis was determined by measuring the OD600 decrease of the cell suspensions and by the PepX activity in the supernatants after 96 h of incubation at 30°C. Similar amounts of PepX were released in each case, independent of the supernatant used, confirming the zymographic data that similar amounts of AcmA are present in the supernatants of L. lactis MG1363 grown on glucose and/or galactose (Table 2). Subsequently, L. lactis MG1363 acmA
1 and L. lactis IL1403 acmA::ISS1 were grown on glucose, galactose, or a mixture of both sugars until stationary phase. Equal amounts of cells were collected and mixed with the supernatant of overnight cultures of L. lactis MG1363 grown on glucose, galactose, or the sugar mixture. L. lactis MG1363 acmA
1 and L. lactis IL1403 acmA::ISS1 grown on galactose released less PepX into the supernatant after incubation with AcmA than the strains grown on glucose, independent of the source of AcmA (Table 2; only the results of L. lactis MG1363 acmA
1 are shown). Both mutant strains grown on the sugar mixture exhibited an intermediate extent of lysis. In conclusion, lactococcal cells grown on galactose are less susceptible to lysis by AcmA than lactococcal cells grown on glucose.
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TABLE 2. Lysis of L. lactis MG1363 acmA 1 grown on glucose and/or galactose after incubation in L. lactis MG1363 spent supernatants
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To study cell separation further, the two acmA mutant strains were grown on glucose or galactose, and when the cultures reached stationary phase, an AcmA-containing supernatant from an overnight culture of L. lactis MG1363 or L. lactis IL1403 was added to the L. lactis MG1363 acmA
1 or L. lactis IL1403 acmA::ISS1 cells, respectively. The typical long chains of L. lactis MG1363 acmA
1 (8) and of L. lactis IL1403 acmA::ISS1, which are formed during growth on both glucose and galactose, were shortened up to the level of single cells after treatment with the AcmA-containing supernatant (Fig. 4). Thus, cell separation does not seem to be influenced by growth of L. lactis on galactose.
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FIG. 4. Growth of L. lactis on galactose does not affect cell separation. Typical pictures are shown for L. lactis MG1363 acmA 1 grown on 0.5% (wt/vol) glucose or 0.5% (wt/vol) galactose. Cells were mixed with the supernatant of an overnight culture of L. lactis MG1363 acmA 1 (–AcmA) or L. lactis MG1363 (+AcmA). The cells were incubated for 3 h and visualized using a Zeiss light microscope and a Zeiss digital camera. Magnification, x1,000.
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1 cells grown either on glucose or galactose. After incubation for 5 min at room temperature, the cells were spun down, and the MSA2cA that fractionated with the cells was analyzed by Western hybridization using anti-MSA2 antibodies (35). As shown in Fig. 5A, less MSA2cA bound to cells grown on galactose than to cells grown on glucose. The same is true for cell walls isolated from these cells: cell walls from galactose-grown cells bind less MSA2cA (Fig. 5B). However, when the cell walls were first boiled in TCA, a treatment that increases binding of MSA2cA (44), the cell types bound equal amounts of MSA2cA (Fig. 5B).
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FIG. 5. Western blot showing the effects of growth of L. lactis on different carbon sources on the binding of AcmA via its C-terminal binding domain (cA). (A) MSA2cA binding to lactococcal cells grown on 0.5% (wt/vol) glucose or 0.5% (wt/vol) galactose. Equal amounts (as calibrated from the OD600 of the cultures) of L. lactis MG1363 acmA 1 or IL1403 acmA::ISS1 cells grown on glucose or galactose were mixed with equal amounts of MSA2cA protein, that is, the same amount of the supernatant of an L. lactis culture secreting the MSA2cA protein, incubated at room temperature for 5 min, and pelleted. The pellets (cell-bound MSA2cA fraction) were analyzed by Western hybridization using anti-MSA2 antibodies. The binding experiments were performed in duplicate. d, degradation product of MSA2cA that is able to bind to the cells (still containing the cA domain). (B) MSA2cA binding to cell walls isolated from cells grown on 0.5% (wt/vol) glucose or 0.5% (wt/vol) galactose. Equal amounts of cell walls were boiled in water (–TCA) or in 10% TCA (+TCA) and used for an MSA2cA binding assay as described in panel A. Only bound fractions are shown.
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TABLE 3. Comparison of LTAs isolated from L. lactis IL1403 grown on different sugarsa
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The net result of these changes in AcmA binding is that cellular lysis is reduced. Decreased AcmA binding does not lead to diminished cell separation in stationary phase: cells grown on galactose still separate. Electron microscopy analysis revealed the presence of PG bridges between cells, which were present only in the acmA mutant of L. lactis MG1363 and are of a different density than the cell wall itself. The chemical composition of these PG bridges is apparently not influenced by growth on galactose, in contrast to the chemical composition of the cell wall itself.
From an earlier study it is known that LTAs are not present at the poles and septum of the lactococcal cells. As a consequence, AcmA is present only at the poles and septum of the cells (44). Growth on galactose could change the chemical composition of the lactococcal cell wall. L. lactis uses the Leloir pathway to metabolize galactose (17, 36). Via the same Leloir pathway, UDP-glucose and UDP-galactose are formed from galactose and/or glucose. The UDP-sugars are, besides intermediates in the degradation of galactose to lactate, building blocks of cell wall sugars (e.g., in neutral polysaccharides and as substitutions in LTAs) (17). We presume that growth of L. lactis on galactose leads to differences in the amounts or ratios of UDP-glucose and UDP-galactose relative to growth on glucose. As a result, the amount or composition of the component that hinders the binding of AcmA to the PG, most likely LTA, may be changed such that less AcmA is able to bind. Since LTAs are not present at the septum and cell poles, cell separation is not influenced by growth on galactose. Interestingly, a long-chain phenotype was observed when the gene for UDP-glucose 4-epimerase (GalE) was interrupted in L. lactis MG1363 (17). Considering the above, this phenotype could be caused by reduced binding of AcmA to the galE mutant cells, which may contain LTAs with less galactose.
AcmA is a LysM domain-containing protein (8, 9). The LysM domain, in the C terminus of the protein (cA), constitutes a PG binding domain that has been used in a biotechnological application, namely, to bind antigens to certain gram-positive bacteria or cell walls for oral immunization purposes (5, 47). Hybrid proteins composed of this LysM-containing domain cA and an antigenic domain are produced and secreted from L. lactis. After isolation of the fusion proteins from the supernatant, they are loaded onto non-genetically modified gram-positive bacteria. The results from this study indicate that growth of the L. lactis production strain in medium containing galactose could enhance the yield of secreted fusion proteins.
Published ahead of print on 6 June 2008. ![]()
A.S. and G.B. contributed equally to this work. ![]()
Present address: Membrane Enzymology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands. ![]()
Present address: Laboratory of Molecular Bacteriology, Department of Medical Microbiology, University Medical Center Groningen and University of Groningen, Hanzeplein 1, 9700 RB Groningen, The Netherlands. ![]()
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-D-glutaminyl-L-lysyl-endopeptidase which hydrolyzes peptidoglycan. Appl. Environ. Microbiol. 73:5825-5831.
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