Previous Article | Next Article 
Applied and Environmental Microbiology, August 2008, p. 5220-5223, Vol. 74, No. 16
0099-2240/08/$08.00+0 doi:10.1128/AEM.00369-08
Copyright © 2008, American Society for Microbiology. All Rights Reserved.
Identification and Characterization of Bacillus anthracis Spores by Multiparameter Flow Cytometry 
William C. Schumacher,1
Craig A. Storozuk,2,3
Prabir K. Dutta,1 and
Andrew J. Phipps2,3*
Department of Chemistry,1
Department of Veterinary Biosciences,2
Center for Microbial Interface Biology, Ohio State University, Columbus, Ohio 432103
Received 13 February 2008/
Accepted 20 June 2008

ABSTRACT
In response to the need for methods that can rapidly detect
potentially virulent
Bacillus anthracis spores, we developed
a two-color flow cytometric assay capable of simultaneously
identifying
B. anthracis spores and the presence of spore-associated
protective antigen, a virulence marker for strains harboring
the pXO1 plasmid.

INTRODUCTION
Assays that can rapidly and accurately detect
Bacillus anthracis,
the etiologic agent of anthrax, are important tools for combating
bioterrorism (
5,
13,
16). This gram-positive spore-forming bacterium
is a member of the
Bacillus cereus group (along with
B. cereus,
B. thuringiensis, and
B. mycoides) whose members exist ubiquitously
in nature and are genetically related (
7). One of the few distinguishing
features among this group is plasmids that encode virulence
factors (
5). Fully virulent strains of
B. anthracis harbor two
virulence plasmids, pXO1 (
1) and pXO2 (
6), whereas minimally
virulent strains lack one or both.
Common detection methods for B. anthracis include real-time PCR (11) and standard microbiological tests (14), but such assays require either the extraction of genetic material (PCR) or lengthy analysis times (microbiological tests). Comparatively, spore-based methods that analyze intact spores can be rapid because surface antigens are detected directly by using simple labeling procedures (5); however, many of these strategies are not selective for specific members of the B. cereus group (9, 17). Through a phage display screening process, short peptide fragments that exhibited species-specific binding to Bacillus spores were discovered (19, 21), and several investigators have used them successfully (2, 15). One such peptide, ATYPLPIRGGGC (abbreviated ATYP), was conjugated to R-phycoerythrin (RPE) and found by flow cytometry (FCM) to bind only to B. anthracis spores; however, the ATYP-RPE conjugate cannot differentiate spores from different strains of B. anthracis (21).
Recently, the protective antigen (PA) protein expressed by pXO1-harboring strains of B. anthracis has been identified as a spore surface antigen (4, 20). PA is present during the sporulation process and thought to be noncovalently entrapped in the spore coat and exosporium (4). Since the pXO1 plasmid encodes several virulence factors, surface PA can be considered a virulence marker for B. anthracis spores. Here, we report on a two-color FCM assay which couples a fluorescein isothiocyanate (FITC)-conjugated antibody-based PA assay to the B. anthracis spore-specific ATYP-RPE assay. We demonstrate the potential of this multiparameter assay by differentiating PA-positive (PA+) B. anthracis spores from PA-negative (PA–) B. cereus and B. thuringiensis spores.

Bacterial stocks.
The following
Bacillus spp. were used in this study:
B. anthracis Sterne 34F2 (pXO1
+/pXO2
–, seed from the live-spore veterinary
vaccine; Colorado Serum Company, Denver, CO),
B. anthracis Ames
(pXO1
+/pXO2
+),
B. cereus (pXO1
–/pXO2
–), and
B. thuringiensis (pXO1
–/pXO2
–). Bacterial strains were grown, sporulated,
and purified according to previously described methods (
10,
12,
18). Subsequent labeling assays were carried out in phosphate-buffered
saline, pH 7.2.

Surface PA assay.
An amount of 80 µg/ml of a mouse monoclonal antibody against
B. anthracis PA (BAP0101; Abcam) was mixed with approximately
10
6 spores and incubated for 1 h at 37°C. Bound antibody
was detected by incubation with 25 µl of a 1:100 dilution
of FITC-conjugated goat anti-mouse immunoglobulin G (IgG) (heavy
plus light chains) (IgG-FITC; Jackson ImmunoResearch) for an
additional hour at 37°C. Wash/centrifuge steps were used
before and after the addition of IgG-FITC to remove unbound
reagents. Under these conditions, PA was detected on the surface
of
B. anthracis Sterne spores by using FCM (FACSCalibur instrument/CellQuest
Pro software; BD Biosciences) (Fig.
1). As expected, PA was
not detected on the surface of
B. cereus or
B. thuringiensis spores since they do not harbor the pXO1 virulence plasmid.

Two-color assay.
The ATYP peptide (GenScript Corporation) was conjugated to RPE
(Invitrogen) through the heterobifunctional cross-linker sulfosuccinimidyl-4-(
N-maleimidomethyl)cyclohexane-1-carboxylate
(Sulfo-SMCC; Pierce) (
8). PA antibody-treated spores (10
6) were
prepared and labeled stepwise with 25 µl of 1:100 IgG-FITC
and then 25 µl of 2 µM ATYP-RPE. Each reagent was
incubated for 1 h at 37°C, and wash/centrifuge steps were
used before and after the addition of ATYP-RPE. The FCM data
showed that for one lot of
B. anthracis Sterne spores (BAS7),
the two-color assay double labeled 30% of the population (Table
1). An additional 26% of the spores were positive for ATYP-RPE
and negative for surface PA, which reflects the heterogeneity
of surface PA content. We also verified that double labeling
occurred on individual Sterne spores by using confocal microscopy
(TCS SP2 AOBS instrument; Leica Microsystems) (Fig.
2). Lower
surface PA values were obtained for Sterne spores when the detection
reagents were applied simultaneously or in opposite order (ATYP-RPE
followed by IgG-FITC) (data not shown). This discrepancy may
indicate that surface PA exists close to the ATYP peptide receptor(s)
on the exosporium basal layer (
3,
4) and can be blocked by binding
of ATYP-RPE.

Characterization of Bacillus spores by two-color FCM.
We next examined several spore lots to see if differences in
preparation, purification, and storage conditions affected the
outcome of the two-color assay (details presented in Table
1).
Lots BAS3 through BAS8 were labeled similarly by ATYP-RPE (51
to 71% positive) and had comparable surface PA values (23 to
43% positive). Only lots BAS1 and BAS2 demonstrated lower ATYP-RPE
binding (11 to 12% positive) and higher surface PA values (72
to 75% positive). Lots BAS1 and BAS2 were stored in double-distilled
water at 4°C for a longer period of time (4 years) than
any other lot used in this study. The examination of spores
from lots BAS1 and BAS8 by using transmission electron microscopy
revealed that a majority of lot BAS1 spores were missing the
outermost exosporium (Fig.
3a and c). Though the reason is still
unclear, we believe the structural damage to lot BAS1 spores
was caused either by repeated handling during the prolonged
storage or unknown protease activity (possibly through contamination).
From the electron micrographs in Fig.
3 and data in Table
1,
we concluded the following about the two-color assay: (i)
B. anthracis spores only bind ATYP-RPE if they possess an exosporium
and (ii) the detection of subexosporium PA (i.e., spore coat
PA) is possible in the absence of an exosporium. As expected,
B. cereus and
B. thuringiensis spores produced double-negative
results by the two-color assay.
Based on the two-color results, we have developed a set of prototypical
FCM dot-plot patterns for predicting the species of spores belonging
to the
Bacillus genus and their potential virulence (Fig.
4).
Pattern 1 (events occur in lower-left quadrant) corresponds
to ATYP-RPE
–/PA
– non-
B. anthracis spores, such as
B. cereus or
B. thuringiensis spores. Pattern 2 (events occur
in lower-left, upper-left, and upper-right quadrants) is indicative
of ATYP-RPE
+/PA
+ spores, such as
B. anthracis Sterne or Ames
spores, that are potentially virulent. Pattern 3 (events occur
in lower-left and upper-left quadrants) is indicative of ATYP-RPE
+/PA
– spores, such as
B. anthracis Pasteur spores, that are likely
to be minimally virulent. Like pattern 2, pattern 4 (events
occur in lower-left, upper-left, upper-right, and lower-right
quadrants) also occurs with ATYP-RPE
+/PA
+ B. anthracis spores
that are potentially virulent; however, the population in the
lower-right quadrant indicates that a significant fraction of
the spores containing PA are nonreactive with the ATYP-RPE conjugate.
In conclusion, this two-color assay successfully differentiated
pXO1
+ strains of
B. anthracis from pXO1
– strains in only
a few hours. One drawback of this assay is that it cannot resolve
B. anthracis Sterne spores from
B. anthracis Ames spores since
they both harbor the pXO1 plasmid. Preliminary data indicated
that these two strains were labeled similarly by the two-color
assay (data not shown). Work to identify another spore surface
antigen capable of making that distinction is ongoing. Once
discovered, we envision its use in a three-color assay. Nonetheless,
this two-parameter detection assay marks an important step toward
rapid and complete characterization of the dangerous pathogen
known as
B. anthracis.

ACKNOWLEDGMENTS
This material is based upon work supported by the National Science
Foundation under grant no. 0221678.
We are grateful to Mamoru Yamaguchi for performing the electron microscopy work. The B. anthracis Ames, B. cereus, and B. thuringiensis seed lots were generous gifts from Battelle, Columbus, OH.

FOOTNOTES
* Corresponding author. Present address: Battelle, 505 King Avenue, Columbus, OH 43201. Phone: (410) 306-8526. Fax: (614) 458-6727. E-mail:
PhippsA{at}battelle.org 
Published ahead of print on 27 June 2008. 

REFERENCES
1 - Abrami, L., N. Reig, and F. G. van der Goot. 2005. Anthrax toxin: the long and winding road that leads to the kill. Trends Microbiol. 13:72-78.[CrossRef][Medline]
2 - Acharya, G., D. D. Doorneweerd, C. Chang, W. A. Henne, P. S. Low, and C. A. Savran. 2007. Label-free optical detection of anthrax-causing spores. J. Am. Chem. Soc. 129:732-733.[CrossRef][Medline]
3 - Boydston, J. A., L. Yue, J. F. Kearney, and C. L. Turnbough, Jr. 2006. The ExsY protein is required for complete formation of the exosporium of Bacillus anthracis. J. Bacteriol. 188:7440-7448.[Abstract/Free Full Text]
4 - Cote, C. K., C. A. Rossi, A. S. Kang, P. R. Morrow, J. S. Lee, and S. L. Welkos. 2005. The detection of protective antigen (PA) associated with spores of Bacillus anthracis and the effects of anti-PA antibodies on spore germination and macrophage interactions. Microb. Pathog. 38:209-225.[CrossRef][Medline]
5 - Edwards, K. A., H. A. Clancy, and A. J. Baeumner. 2006. Bacillus anthracis: toxicology, epidemiology and current rapid-detection methods. Anal. Bioanal. Chem. 384:73-84.[CrossRef][Medline]
6 - Green, B. D., L. Battisti, T. M. Koehler, C. B. Thorne, and B. E. Ivins. 1985. Demonstration of a capsule plasmid in Bacillus anthracis. Infect. Immun. 49:291-297.[Abstract/Free Full Text]
7 - Helgason, E., O. A. Okstad, D. A. Caugant, H. A. Johansen, A. Fouet, M. Mock, I. Hegna, and A. Kolsto. 2000. Bacillus anthracis, Bacillus cereus, and Bacillus thuringiensis—one species on the basis of genetic evidence. Appl. Environ. Microbiol. 66:2627-2630.[Abstract/Free Full Text]
8 - Hermanson, G. T. 1995. Bioconjugate techniques. Academic Press, San Diego, CA.
9 - Kamboj, D. V., G. S. Agarwal, B. S. Dwarkanath, J. S. Adhikari, S. I. Alam, and L. Singh. 2006. Flow-cytometric analysis of Bacillus anthracis spores. Def. Sci. J. 56:769-774.
10 - Kim, H. U., and J. M. Goepfert. 1974. A sporulation medium for Bacillus anthracis. J. Appl. Bacteriol. 37:265-267.[Medline]
11 - Klee, S. R., H. Nattermann, S. Becker, M. Urban-Schriefer, T. Franz, D. Jacob, and B. Appel. 2006. Evaluation of different methods to discriminate Bacillus anthracis from other bacteria of the Bacillus cereus group. J. Appl. Microbiol. 100:673-681.[CrossRef][Medline]
12 - Leighton, T. J., and R. H. Doi. 1971. Stability of messenger ribonucleic acid during sporulation in Bacillus subtilis. J. Biol. Chem. 246:3189-3195.[Abstract/Free Full Text]
13 - Lim, D. V., J. M. Simpson, E. A. Kearns, and M. F. Kramer. 2005. Current and developing technologies for monitoring agents of bioterrorism and biowarfare. Clin. Microbiol. Rev. 18:583-607.[Abstract/Free Full Text]
14 - Marston, C. K., J. E. Gee, T. Popovic, and A. R. Hoffmaster. 2006. Molecular approaches to identify and differentiate Bacillus anthracis from phenotypically similar Bacillus species isolates. BMC Microbiol. 6:1-7.[CrossRef][Medline]
15 - Pai, S., A. D. Ellington, and M. Levy. 2005. Proximity ligation assays with peptide conjugate "burrs" for the sensitive detection of spores. Nucleic Acids Res. 33:1-7.[Abstract/Free Full Text]
16 - Petrenko, V. A., and I. B. Sorokulova. 2004. Detection of biological threats. A challenge for directed molecular evolution. J. Microbiol. Methods 58:147-168.[CrossRef][Medline]
17 - Stopa, P. J. 2000. The flow cytometry of Bacillus anthracis spores revisited. Cytometry 41:237-244.[Medline]
18 - Tamir, H., and C. Gilvarg. 1966. Density gradient centrifugation for the separation of sporulating forms of bacteria. J. Biol. Chem. 241:1085-1090.[Abstract/Free Full Text]
19 - Turnbough, C. L., Jr. 2003. Discovery of phage display peptide ligands for species-specific detection of Bacillus spores. J. Microbiol. Methods 53:263-271.[CrossRef][Medline]
20 - Welkos, S., S. Little, A. Friedlander, D. Fritz, and P. Fellows. 2001. The role of antibodies to Bacillus anthracis and anthrax toxin components in inhibiting the early stages of infection by anthrax spores. Microbiology 147:1677-1685.[Abstract/Free Full Text]
21 - Williams, D. D., O. Benedek, and C. L. Turnbough, Jr. 2003. Species-specific peptide ligands for the detection of Bacillus anthracis spores. Appl. Environ. Microbiol. 69:6288-6293.[Abstract/Free Full Text]
Applied and Environmental Microbiology, August 2008, p. 5220-5223, Vol. 74, No. 16
0099-2240/08/$08.00+0 doi:10.1128/AEM.00369-08
Copyright © 2008, American Society for Microbiology. All Rights Reserved.