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Applied and Environmental Microbiology, September 2008, p. 5383-5391, Vol. 74, No. 17
0099-2240/08/$08.00+0 doi:10.1128/AEM.00720-08
Copyright © 2008, American Society for Microbiology. All Rights Reserved.

Hyesuk Kong,
Joseph George,
Christine Anderson, and
Vladimir E. Chizhikov
Center for Biologics Evaluation and Research, Food and Drug Administration, 1401 Rockville Pike, HFM-470, Rockville, Maryland 20852
Received 27 March 2008/ Accepted 27 June 2008
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Despite precautionary measures and systematic mycoplasma monitoring, mycoplasma contamination is periodically detected in veterinary and human live virus vaccines or viral stocks produced by multiple manufacturers worldwide (4, 5, 10, 11, 28, 30, 34, 46, 55, 66). Other biologics (nonvaccine products, e.g., commercial diagnostic antigens) were also reported to be contaminated with mycoplasmas (37, 60). Mycoplasma testing of cell substrates and cell-derived biological products in the United States is regulated by Title 21 of the Code of Federal Regulations (21 CFR 610.30) and additionally described in "Points to Consider (PTC) in the Characterization of Cell Lines Used to Produce Biologicals (1993)" (39). The procedure, which includes broth/agar and indicator cell line tests, was developed to detect all mycoplasma species previously isolated from contaminated cell substrates, viral vaccines, and virus stocks. Despite the reported ability of this mycoplasma testing procedure to efficiently detect all possible cell culture mycoplasmal contaminants, the overall testing procedure is time-consuming (a minimum of 28 days) and tedious and might not be suitable for biologics with shelf-lives that are shorter than the turnaround time for testing. In order to reduce the time required for mycoplasma testing, various approaches based on nucleic acid testing (NAT) technologies targeting different genetic markers of Mollicutes have been developed and proposed as potential alternatives to the current methods (15, 31, 33, 54, 56, 57, 63). However, although PCR methods have definite advantages over conventional microbiological methods in terms of analytical sensitivity, simplicity, and turnaround time required for testing, it continues to be unclear whether PCR-based methods can provide a limit of detection comparable or superior to those of conventional methods. Furthermore, NAT methods do not allow for accurate discrimination between viable and nonviable mycoplasma contaminants that might lead to false-positive results in mycoplasma testing (35). From this standpoint, the development of additional pretesting sample preparation procedures able to improve the sensitivity of the NAT-based assay as well as to determine whether mycoplasmas are viable is of high importance to ensure the safety and purity of cell substrates and cell-derived biologics. Biological enrichment is believed to be one of the more promising approaches due to its ability to significantly increase the number of viable mycoplasma cells to levels readily and reliably detected by routine PCR or other molecular methods. Alternatively, mycoplasma species known to be common cell line contaminants can be amplified using either cultivation in broth media (1, 3, 11, 29, 40, 50) or cocultivation with permissive mammalian cell lines (6, 11, 21, 29, 40). However, the use of broth media for mycoplasma enrichment has three inherent shortcomings. First, there are no universal axenic medium and environmental conditions that support equally efficient growth of all known mycoplasma species (isolates). Second, some mycoplasma species or individual strains are fastidious or even uncultivable in broth media (e.g., some strains of Mycoplasma hyorhinis, M. fermentans, M. pneumoniae, M. genitalium, etc.) Finally, the growth of fastidious mycoplasmas in broth media is relatively slow, with culture turnaround times of up to 30 days. In contrast, the use of permissive mammalian cell cultures can avoid the above problems while expediting and simplifying mycoplasma testing procedures in general. The use of cell cultures could efficiently enrich any mycoplasma contaminant to titers of 102 to 103 CFU/ml and above (32, 36), which allows for reliable detection of mycoplasmas by routine single-round NAT-based assays. Usually, these titers of mycoplasmas can be reached in less than 1 week. The feasibility of cell culture enrichment for improving the efficiency of NAT-based mycoplasma testing methods was recently addressed in the latest version of the European Pharmacopeia (monograph 2.6.7).
Recently, the successful use of Vero cell culture for the recovery, detection, and antibiotic susceptibility testing of M. genitalium from clinical specimens was demonstrated (25, 26, 32). At the same time, different cell cultures may exhibit a difference in the ability to support growth of different mycoplasma species. Thus, the ability of Vero cells to support rapid and uniform growth of common mycoplasma cell line contaminants was evaluated (36). Surprisingly, significant differences in the growth rates of different mycoplasma species in Vero cell culture were observed, questioning the utility of Vero cells as a universal cell culture for mycoplasma enrichment (36).
Herein we describe our results on evaluation of the feasibility of different permissive mammalian cell cultures to support a uniform enrichment of low levels of mycoplasma agents in cell substrates and biologics, using infections with different mycoplasma species known to be common cell line contaminants. We believe that the use of this approach can significantly enhance the sensitivity and efficiency of mycoplasma detection in cell substrates and biologics by either NAT-based or biochemical methods.
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Mammalian and insect cell cultures.
The mammalian cell cultures (Table 1) obtained from ATCC were propagated in Corning T75 flasks (Corning Life Sciences, Acton, MA), using Dulbecco's modified Eagle medium (DMEM) supplemented with glucose, GlutaMAX-I, sodium pyruvate, and 5% heat-inactivated fetal bovine serum (FBS; Invitrogen, Carlsbad, CA). All cell cultures were grown without antibiotics at 37°C ± 1°C under 5% CO2. High Five insect cells (Invitrogen) were grown at 30°C ± 1°C under an air atmosphere, using T75 flasks and Grace's insect cell culture medium (Grace's medium; Invitrogen) supplemented with 3.33 mg/liter lactalbumin hydrolysate, 3.33 mg/liter yeast hydrolysate, and 10% heat-inactivated FBS (Invitrogen). During the study, all working cell culture stocks were periodically tested for the absence of mycoplasmal, bacterial, and fungal contaminations by using light microscope examination of monolayers, fluorescence microscopy of Hoechst-stained cells, mycoplasma testing with a broth/agar culture method, and PCR amplification of the 16S rRNA gene (15) and the 16S-23S internal transcribed spacer (ITS) region (61). Using these methods, no mycoplasmal or any other bacterial contamination was ever detected in the working cell culture stocks.
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TABLE 1. ATCC cell lines used in this study
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The mycoplasma titers (CFU/ml) in working stocks were determined by plating 0.2-ml dilutions with expected mycoplasma concentrations of 10, 100, and 1,000 CFU/ml on agar plates of ATCC medium 243 (for all mycoplasmas except M. synoviae) or ATCC medium 486 for M. synoviae. All media were supplemented with heat-inactivated horse or swine serum (ATCC, Manassas, VA) and 10% yeast extract solution (Invitrogen, Carlsbad, CA). The plates were incubated for a maximum of 14 days at 37°C ± 1°C under anaerobic (GasPak EZ anaerobe pouch system; BD Biosciences, Franklin Lakes, NJ) or aerobic (5% CO2) conditions, depending on the species, and CFU numbers were counted at the end of incubation. Bacteroides fragilis (ATCC 25285; BD Biosciences) was used as the indicator culture to confirm anaerobic conditions when the GasPak EZ anaerobe pouch system was used.
Genomic DNA isolation and PCR amplification.
While thawing at room temperature, frozen cells were vigorously shaken to obtain well-homogenized cell debris. Four milliliters of this mixture was centrifuged at 16,110 x g for 20 min. Total DNA from the cell pellet was extracted using a DNeasy blood and tissue kit (Qiagen, Chatsworth, CA) according to the manufacturer's protocol. The 16S-23S rRNA ITS regions of all Mollicutes species used in the study were amplified using the forward PCR primer 16S-F-MYC (GGTGAATACGTTCTCGGGTCTTGTACACAC) and the reverse PCR primer 23S-R1-MYC (TNCTTTTCACCTTTCCCTCACGGTAC) (61). Depending on the species, the sizes of ITS-derived amplicons varied from 600 bp to 1,000 bp (61).
Amplification of the rpoB gene of the Mollicutes strains used in this study was carried out using the forward PCR primer rpoB-F1-MYC (ATGGGTGCVAACATGCAACGTCAAGC) and a mixture of two reverse primers, rpoB-R-MYC (GCTCAHACTTCCATTTCHCCAAA) and rpoB-R1-MYC (CGTTTTGWGCTTTACCACCCATTGGTTGTTG) (36). The sizes of rpoB-specific amplicons varied from 1,250 to 1,600 bp, depending on the mycoplasma species.
Briefly, the standard PCR mixture (50 µl) contained 1.5 U of HotStar Taq DNA polymerase, 1x reaction buffer supplemented with 2.5 mM MgCl2 (Qiagen, Chatsworth, CA), 500 nM of each forward and reverse primer, a 200 µM concentration of each deoxyribonucleoside triphosphate (dATP, dGTP, dCTP, and dTTP), and 5 µl of DNA template (ca. 0.1 to 0.2 µg of total DNA). The PCR was performed using a GeneAmp PCR system model 9600 thermocycler (PE Applied Biosystems, Foster City, CA), with the following cycle conditions: initial activation at 95°C for 15 min; 40 cycles of 94°C for 1 min, 60°C (for ITS PCR) or 55°C (for rpoB PCR) for 1 min, and 72°C (extension) for 1 min; and a final extension at 72°C for 7 min. The synthesis of PCR products with the expected molecular weights was confirmed by electrophoresis using a 1% SeaKem Gold TAE-agarose gel with ethidium bromide (Lonza, Allendale, NJ), followed by UV visualization. In order to identify mycoplasma species, the rpoB amplicons were additionally sequenced, and the sequences obtained were compared with those available in the GenBank database. The absence of PCR inhibitors in isolated DNAs was confirmed by PCR amplification of cell housekeeping genes. Thus, primers F1-Animal (CCWAYCGAGCYKGGTGATAGCTGGTT) and R1-Animal (TCCGGTCTGAACTCAGATCACGTAGGA) were used for amplification of the mitochondrial 16S rRNA of mammalian cells, while primers Trichoplusia_HSP70_f (GCTCAGCGTCAAGCCACCAAGGAC) and Trichoplusia_HSP70_r (TGACACCTCCCACAGTCTCGATAC) were used to amplify the heat shock protein gene (hsp70) from insect High Five or Sf9 cells. The synthesis of amplicons with approximate sizes of 1,085 bp and 763 bp was observed for mammalian and insect cells, respectively. The PCR conditions used for amplification of these housekeeping genes were the same as those described above for mycoplasmal ITS-specific PCR.
Detection of mycoplasma in cell cultures by use of a MycoAlert kit.
During the mycoplasma enrichment study, samples of supernatants from infected cultures were collected on days 0, 3, and 7 postinfection. The supernatant was cleared by low-speed centrifugation and stored at –80°C until analysis using a MycoAlert mycoplasma detection kit (Lonza, Frederick, MD) according to the manufacturer's instructions. The luminescent signals in analyzed samples were read using an FB12 luminometer (Berthold Detection Systems, Oak Ridge, TN). Samples with ratios of reading B to reading A of >1 were considered to be mycoplasma positive. In cases where borderline ratios (e.g., 0.9 to 1.3) were observed, the samples were retested after concentration of mycoplasmas by centrifugation of 2 ml of cell culture supernatant at 16,000 x g for 20 min. If the ratio remained unchanged between readings, the sample was considered to be mycoplasma negative in the MycoAlert assay.
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The study included the screening of several mammalian cell cultures that had different growth characteristics and were derived from two different tissue types, i.e., fibroblasts or epithelium (Table 1). Four of them, Vero, MDCK, MDBK, and HEK-293 cells, were derived from kidney epithelial cells of different mammals, with average doubling times of 18 to 22 h (9, 44). In contrast to epithelial cells, fibroblast cells derived from respiratory tract tissues (WI-38, EBTr, and R9ab cells) or kidneys (CV-1) of different mammals grow more slowly, with average doubling times ranging from 24 to 72 h (7). The initial screening of cell cultures was carried out using infection of 80 to 90% confluent cell monolayers with low infection doses (0.1 to 1.0 CFU/ml) of M. salivarium strain PG-20. The use of M. salivarium for initial screening relied on the previously observed less efficient growth of this species in Vero cell culture than that of other tested mycoplasma species (36). It is necessary to note that M. salivarium is known as an infrequent cause of cell line contamination (43). Nevertheless, if the nutrition and environmental conditions are favorable, it can be grown in cell cultures to high titers. For example, the titer of M. salivarium in human lymphocyte cell cultures infected with M. salivarium was reported to be as high as 108 CFU/ml (43). Thus, M. salivarium was certainly a useful reference species with which to carry out a preliminary screening of cell cultures for the ability to support the growth of fastidious mycoplasma agents. Based on the results of the screening, three cell lines, WI-38, EBTr, and CV-1, were excluded from further study because, even at 7 dpi, M. salivarium could not be detected in these cell cultures by in-house single-round PCR assays developed for detection of mycoplasmal DNA.
To assess the relative capabilities of six other cell lines (Vero, MDBK, HEK-293, Hep-G2, R9ab, and MDCK) to support the enrichment of potential mycoplasma contaminants, we used several mycoplasma species currently recommended by the European Pharmacopoeia as positive controls in mycoplasma testing procedures (M. arginini, M. fermentans, M. gallisepticum, M. hyorhinis, M. orale, M. synoviae, and Acholeplasma laidlawii), as well as a few more species (M. gallinaceum, M. bovis, M. hominis, and M. salivarium) known to cause contamination of vaccine cell substrates. The cell cultures were infected with serial dilutions of each analyzed mycoplasma species, and the mycoplasmal growth was tested using PCR analysis of total DNA isolated from infected cells on days 0, 3, and 7 postinfection. The results of this study are summarized in Table 2, which shows that the lowest mycoplasma infection doses resulted in positive PCR-based detection of mycoplasma in infected cell cultures at 3 and/or 7 dpi. The data clearly demonstrated a significant variability in the growth efficiencies of mycoplasma species in the tested cell lines. Of all analyzed cell cultures, only MDCK cells were found to demonstrate the unique ability to support efficient growth of all mycoplasma species at low infection doses ranging from 0.05 to 0.25 CFU/ml.
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TABLE 2. Results of biological enrichment of Mycoplasma species by use of ATCC cell cultures
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Growth features of M. synoviae in mammalian cell cultures.
M. synoviae was included in the study because it is a well-known avian mycoplasma agent with significant poultry importance. Moreover, M. synoviae is a fastidious species which does not grow in media commonly used for cultivation of other mycoplasmas and requires specially formulated media (Frey's or Chalquist's) supplemented with NAD coenzyme (67). Despite its fastidious growth character, M. synoviae was found to be able to infect and efficiently grow in chicken embryo cell cultures (2). It was shown that the growth of M. synoviae depended on the presence of avian cells, because no growth of the mycoplasma was detected in the axenic cell culture medium (2). The results of our study using the infection of different cell cultures with low infection doses of M. synoviae strain WVU 1853, ranging from 0.05 to 1.0 CFU/ml, revealed a dramatic difference in the ability of this mycoplasma species to replicate in different mammalian cells (Table 2). Of all tested mammalian cells, only MDCK cells were found to enable efficient M. synoviae growth when the aforementioned mycoplasmal infection doses were used. Another striking observation was that Vero cells, recommended by European and Japanese pharmacopoeias and the PTC and widely used as the indicator cell culture for mycoplasma testing, were unable to support the enrichment of M. synoviae at the infection doses used in the screening study.
To confirm the ability of M. synoviae to grow in Vero cell culture and to accurately assess the difference in susceptibility between Vero and MDCK cell cultures, we infected these two cultures with serial 10-fold dilutions of an M. synoviae stock. The mycoplasmal growth was tested at 7 dpi, using PCR amplification of the mycoplasmal ITS genetic marker (Fig. 1). The results of this study showed that enrichment in MDCK cells allowed for at least a 1-log increase in sensitivity of M. synoviae detection in comparison with Vero cells. It is noteworthy that comparison of the growth of M. synoviae in two different types of canine-derived cells, i.e., DH82 (ATCC CRL-10389), a macrophage-monocyte cell line derived from neoplastic progenitor cells of canine malignant histiocytosis (65), and kidney-derived epithelial MDCK cells, showed that both cell lines provide equivalent sensitivities of M. synoviae detection at 7 dpi (Fig. 2). The reason for the equivalency between the two canine cell lines as well as their superior efficiency in comparison with other tested mammalian cell lines continues to be unclear. We may only speculate that both epithelial and macrophage-monocyte canine cells provide an optimal spectrum of nutritional factors required for the efficient growth of M. synoviae in mammalian cell cultures.
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FIG. 1. Growth of M. synoviae WVU 1853 in MDCK and Vero cell cultures, detected by PCR on the 16S-23S ITS region. Both cultures were infected with serial dilutions of the strain stock and incubated for 7 days at 37°C and 5% CO2. The mycoplasma titers (CFU/ml) in the dilutions were determined using ATCC 486 medium.
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FIG. 2. Growth of M. synoviae WVU 1853 in MDCK, Vero, and DH82 cell cultures, detected by PCR on the rpoB gene. The cultures were infected with serial dilutions of the strain stock and incubated for 7 days at 37°C and 5% CO2. The mycoplasma titers (CFU/ml) in the dilutions were determined using ATCC 486 medium.
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FIG. 3. Daily dynamics of growth of M. synoviae WVU 1853 in MDCK and Vero cell cultures, detected by PCR on the rpoB gene. Both cultures were infected with the same infectious dose (25 CFU/ml), and flasks were taken daily until 7 dpi (at 37°C and 5% CO2) and frozen at –80°C until DNA extraction.
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FIG. 4. Growth of M. fermentans PG18 in MDCK cell cultures, detected by PCR on the rpoB gene. Serial dilutions of frozen and unfrozen stocks of the strain were used for infection of MDCK cell cultures, and infected flasks were incubated until 7 dpi at 37°C and 5% CO2. The mycoplasma titers (CFU/ml) in the dilutions were determined using ATCC 243 medium under anaerobic conditions.
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Analysis of the ability of High Five insect cell culture to support enrichment of mycoplasmal agents.
In parallel with the testing of mammalian cell lines, we also conducted experiments to assess the feasibility of insect cell cultures to carry out enrichment of low levels of mycoplasma contamination prior to the application of NAT detection methods. Similar to mammalian cell lines, insect cell lines are also known to be susceptible to mycoplasma infection (51, 52). However, in contrast to mammalian cells, insect cells demonstrate natural resistance to infection with a variety of mammalian viruses or support very limited virus replication without visible cytopathic effects (68). From this standpoint, the use of insect cells may offer a certain advantage in mycoplasma testing of live viral vaccines. Commonly, mycoplasma testing using an indicator cell culture assay requires a neutralization of viral infectivity by specific antibodies. The use of antibodies always raises the question of the potential inhibition of mycoplasmal growth. The replacement of mammalian cells with insect cells in some cases avoids the use of neutralizing antibodies when cells are resistant to the tested virus. However, the application of insect cells for mycoplasma testing in indicator cell culture tests is restricted by the limited number of mycoplasma species able to replicate in insect cell cultures at 25 to 28°C (permissive temperature range for insect cells). An increase of the temperature above 28°C allows a broader range of mycoplasma species to efficiently replicate in insect cell cultures (52). Thus, the use of insect cell cultures promises to significantly simplify the testing of both mycoplasmal and spiroplasmal contaminations by use of biological enrichment (22-24, 52, 53). However, until now, it has been uncertain if insect cells were able to support the growth of the vast majority of mycoplasma target species able to cause contamination of mammalian cell cultures (51, 52). To address this issue, we carried out a study aimed at assessing the enrichment efficiencies of common mycoplasmal cell line contaminants, using two insect cell lines, Sf9 (Spodoptera frugiperda) and High Five (Trichoplusia ni). The results of the study showed that in comparison to Sf9 cells, High Five cells demonstrated more efficient support of growth of mycoplasmas (data not shown). We also observed that the use of a permissive temperature for propagation of insect cells (from 25 to 30°C) and mycoplasma enrichment resulted in selective growth of some, but not all, target mycoplasma species (data not shown).
Our results for infection of High Five cell cultures at nonpermissive temperatures showed that increases of the incubation temperature from 30°C ± 1°C to 35°C ± 1°C and, further, to 37°C ± 1°C resulted in an additional increase (up to 2 log) of mycoplasma growth in High Five cell cultures and finally allowed for mycoplasma detection at contamination levels as low as 0.05 or 0.1 CFU/ml. This level of sensitivity is equivalent to that observed previously when mammalian cell cultures were used for mycoplasma enrichment. The positive effect of temperature increase on mycoplasma growth was observed for several mycoplasma species, including M. gallisepticum, M. bovis, and M. orale (Fig. 5).
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FIG. 5. M. gallisepticum growth in H5 insect cell culture at different temperatures, detected by PCR on the rpoB gene. H5 cells were infected with different infectious doses of mycoplasma and incubated for 7 days at 30°C and 35°C. Vero cells were used as a growth control.
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Although we successfully demonstrated the enrichment of several mycoplasma species by use of High Five insect cell culture, M. hyorhinis strain DBS1050 was unable to grow in these cells to levels readily detected by PCR. Thus, all our attempts to optimize growth conditions (medium, temperature, supplements, etc.) to achieve efficient growth of M. hyorhinis strain DBS1050 in High Five insect cell culture did not display any positive results. M. hyorhinis strain DBS1050 is known to have atypical cultivation features, and in contrast to the type strains (BTS-7 and GDL) of M. hyorhinis, this strain does not grow in defined mycoplasma broth media. Unsuccessful attempts to cultivate M. hyorhinis strain DBS1050 in defined microbiological media were previously attributed to the sensitivity of this strain to compounds in peptones/hydrolysates and yeast extracts used for medium formulation (12, 13, 18). We also showed that addition of yeast extract to DMEM at a concentration of 3.33 mg/liter, which is equivalent to that in Grace's medium, and the use of this modified DMEM for growth of MDCK cells and cocultivation with M. hyorhinis DBS1050 resulted in dramatic suppression of the growth of this mycoplasma strain (Fig. 6). Thus, the failure to enrich M. hyorhinis DBS1050 in insect cells was most likely caused by the use of Grace's medium containing peptones and yeast extract. We propose that the use of other artificial media not containing any peptones and yeast extracts but suitable for growth of insect cells may enable efficient enrichment of inhibitor-sensitive M. hyorhinis strains.
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FIG. 6. Growth of M. hyorhinis DBS1050 in MDCK cell culture grown in DMEM with and without yeast extract at 37°C and 5% CO2. MDCK culture was infected with serial dilutions of the strain stock and incubated for 7 days. Growth of M. hyorhinis was detected by PCR on the 16S-23S ITS region.
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Our results demonstrate that the application of biological enrichment prior to application of NAT-based detection methods, as well as other suitable molecular methods, shortens the time required for mycoplasma testing from between 28 and 30 days to 1 week. Moreover, the ability of MDCK cell culture to support the efficient growth of different mycoplasmal agents opens the real opportunity to simplify the mycoplasma testing procedure by using one universal cell culture for enrichment of the vast majority of mycoplasmas, including all known common cell line contaminants.
Published ahead of print on 7 July 2008. ![]()
These authors contributed equally to this work. ![]()
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