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Applied and Environmental Microbiology, October 2008, p. 6397-6404, Vol. 74, No. 20
0099-2240/08/$08.00+0 doi:10.1128/AEM.00841-08
Copyright © 2008, American Society for Microbiology. All Rights Reserved.
Novel Parachlamydia acanthamoebae Quantification Method Based on Coculture with Amoebae
Junji Matsuo,1
Yasuhiro Hayashi,1
Shinji Nakamura,2
Marie Sato,1
Yoshihiko Mizutani,3
Masahiro Asaka,4 and
Hiroyuki Yamaguchi1*
Department of Medical Laboratory Sciences, Faculty of Health Sciences,1
Department of Gastroenterology and Hematology, Graduate School of Medicine, Hokkaido University, Sapporo, Hokkaido 060-0812, Japan,4
Division of Biomedical Imaging Research,2
Department of Human Pathology, Juntendo University Graduate School of Medicine, Tokyo 113-8421, Japan3
Received 8 April 2008/
Accepted 18 August 2008

ABSTRACT
Parachlamydia acanthamoebae, belonging to the order
Chlamydiales,
is an obligately intracellular bacterium that infects free-living
amoebae and is a potential human pathogen. However, no method
exists to accurately quantify viable bacterial numbers. We present
a novel quantification method for
P. acanthamoebae based on
coculture with amoebae.
P. acanthamoebae was cultured either
with
Acanthamoeba spp. or with mammalian epithelial HEp-2 or
Vero cells. The infection rate of
P. acanthamoebae (amoeba-infectious
dose [AID]) was determined by DAPI (4',6-diamidino-2-phenylindole)
staining and was confirmed by fluorescent in situ hybridization.
AIDs were plotted as logistic sigmoid dilution curves, and
P. acanthamoebae numbers, defined as amoeba-infectious units (AIU),
were calculated. During culture, amoeba numbers and viabilities
did not change, and amoebae did not change from trophozoites
to cysts. Eight amoeba strains showed similar levels of
P. acanthamoebae growth, and bacterial numbers reached ca. 1,000-fold (10
9 AIU
preculture) after 4 days. In contrast, no increase was observed
for
P. acanthamoebae in either mammalian cell line. However,
aberrant structures in epithelial cells, implying possible persistent
infection, were seen by transmission electron microscopy. Thus,
our method could monitor numbers of
P. acanthamoebae bacteria
in host cells and may be useful for understanding chlamydiae
present in the natural environment as human pathogens.

INTRODUCTION
During the last decade, chlamydiae, which are obligate intracellular
bacterial pathogens, have been reclassified as the order
Chlamydiales,
which includes four families:
Chlamydiaceae,
Parachlamydiaceae,
Waddliaceae, and
Simkaniaceae (
8). The
Chlamydiaceae are well
known to have a broad range of distribution in animals and humans
and to be causative agents of human diseases (
6,
34,
37,
50,
61). This family includes two major human pathogens:
Chlamydophila pneumoniae is a causal agent of common respiratory infection
and is also suspected of being involved in some chronic diseases,
such as atherosclerosis (
9), and
Chlamydia trachomatis is responsible
for sexually transmitted disease and preventable blindness (
57).
Chlamydiaceae species can infect most cultured human cells,
including epithelial cells, endothelial cells, monocytes/macrophages,
and lymphocytes (
1,
22,
30,
53). They have a specific developmental
cycle with alteration between an extracellular spore-like form,
the elementary body (EB), and an intracellular metabolically
active but noninfectious form, the reticulate body (RB) (
43,
44,
54). The biological features of these chlamydiae, with respect
to interaction with host cells and cell trafficking via the
endocytic pathway, have well been studied (
2,
14,
31,
58,
60,
63). Important to this research are reliable quantification
methods to accurately determine the number of viable cells,
such as the inclusion-forming unit (IFU) assay, as described
by Ripa and Mardh (
51).
Parachlamydiaceae, Waddliaceae, and Simkaniaceae species have recently been recognized as chlamydiae that show a wide distribution range in the natural environment, such as in rivers and in soil (15). All these species can survive within free-living amoebae, which are considered a reservoir for protecting bacteria from multiple environmental stresses (3, 17, 20, 29, 49, 56). Parachlamydia acanthamoebae and Simkania negevensis have been associated with lower respiratory tract infections (5, 38, 42), and Waddlia chondrophila, which was originally isolated from an aborted bovine fetus, is considered a potential abortigenic agent (17). In particular, there is accumulating evidence supporting the pathogenic role of P. acanthamoebae in humans (5, 15). Several studies have reported that parachlamydial DNA was detected by PCR in mononuclear cells of sputa and in bronchoalveolar lavage samples of a patient with bronchitis (16, 49). Other studies have suggested that P. acanthamoebae might be an agent of community-acquired pneumonia in human immunodeficiency virus-infected patients and in organ transplant recipients receiving immunosuppressive therapy (10, 11). P. acanthamoebae might also be a common agent of inhalation pneumonia (23, 24). Thus, P. acanthamoebae is emerging as a potential agent of respiratory tract infections. Moreover, recent work indicates that P. acanthamoebae possesses a specific developmental cycle consisting of the EB, the RB, and the crescent body (29) and that P. acanthamoebae can enter and multiply within human macrophages, pneumocytes, and lung fibroblasts and then induce apoptosis (13, 25, 27). A biological assay for determining the number of P. acanthamoebae bacteria inside host cells has been already established (27, 28). This method, which uses the mean number of bacteria per target cell or the highest dilution values that can still induce amoeba lysis, might be useful to roughly assess changes of bacterial numbers, but it is difficult to accurately determine the numbers of viable bacteria in cultures. Thus, for understanding the growth properties of P. acanthamoebae within mammalian cells as well as in amoebae, we present here a novel quantification method for P. acanthamoebae based on coculture with amoebae as well as an IFU assay suitable for Chlamydiaceae.

MATERIALS AND METHODS
Eukaryotic cells.
Free-living amoebae (
Acanthamoeba castellanii C3 and environmental
isolates of
Acanthamoeba spp.) and mammalian epithelial cells
(human epithelial cell line HEp-2, derived from an epidermoid
carcinoma of human larynx, and Vero cells, derived from the
kidney of a normal adult African green monkey) were used for
the present study.
A. castellanii C3 (ATCC 50739) and HEp-2
cells (RCB 1889) were purchased from the American Type Culture
Collection and the Riken Cell Bank, respectively. The eight
strains of environmental
Acanthamoeba spp. were isolated from
soil and river samples from Sapporo City, Japan. Amoebae were
maintained in broth including 0.75% peptone, 0.75% yeast extract,
and 1.5% glucose (PYG) at 30°C (
59). The epithelial cells
were maintained in 10% fetal calf serum-Dulbecco modified Eagle
medium at 37°C in 5% CO
2.
Bacteria.
P. acanthamoebae Bn9 (ATCC VR-1476) was purchased from the American Type Culture Collection. The bacteria were propagated in the amoeba cell culture system according to methods described previously (29). In brief, the infected cells were harvested on day 7 and disrupted by freeze-thawing. After centrifugation at 180 x g for 5 min to remove cell debris, bacteria were concentrated by high-speed centrifugation at 3,500 x g for 30 min. The bacterial pellet was resuspended in sucrose-phosphate-glutamic acid buffer including 0.2 M sucrose, 3.8 mM KH2PO4, 6.7 mM Na2HPO4, and 5 mM L-glutamic acid (pH 7.4) and then stored at –80°C until used. The infective progeny was determined by the procedure described below.
Quantification procedure for infective progeny using coculture with amoebae.
After freeze-thawing, each sample containing viable P. acanthamoebae was serially diluted from 100 to 10–7 with PYG broth and incubated with A. castellanii (104 or 105 per well) in PYG broth with or without cycloheximide (200 µg/ml) on 96-well plates for 2 days. The infection rate of P. acanthamoebae for amoebae (amoeba-infectious dose [AID]) in each well was determined by microscopy at a magnification of x100, following DAPI (4',6-diamidino-2-phenylindole) staining. Ten fields were randomly selected for this assessment. The AIDs for a sample were plotted as a logistic sigmoid dilution curve using statistical software (KaleidaGraph 3.6; Hulinks, Tokyo, Japan). For logistic fitting, y = ybottom + ( ytop – ybottom)/[1 + (x/AID50)slope], as a function of the four-parameter logistic model described previously, was introduced (19). Because the AID values for each well are logistically varied in a range from 0 to 100%, the logistic function formula was simplified by plugging in ybottom = 0 (0%) and ytop = 1 (100%), as follows: y = 1/[1 + (x/AID50)slope]. x and y show the value of the 10-fold dilution rate (the values vary from 100 to 107), and the amoeba-infectious rate (the values vary from 0% to 100%) corresponds to each value of the 10-fold dilution. Namely, the formula y = 1/[1 + (x/AID50)slope] with both sloped values of x and y logically draws a specific sigmoid curve via statistical software and shows a dilution rate corresponding to the mid-value of amoeba-infectious rate, AID50. Finally, the viable bacterial numbers in cultures, defined as amoeba-infectious units (AIU), can be determined based on the value of AID50.
Infection procedure for monitoring bacterial growth.
A 24-well plate with HEp-2 or Vero cells (5 x 105/well) suspended in 10% fetal calf serum-Dulbecco modified Eagle medium or a six-well plate with amoebae (5 x 105/well) suspended in PYG broth was infected with 5 x 106 cells of P. acanthamoebae (multiplicity of infection of 1) by centrifugation at 700 x g for 1 h (the number of bacteria was determined by AIU assay). After centrifugation, cultures were resuspended in each medium and incubated for 10 days at 30°C in a normal atmosphere (for amoebae) or at 37°C under 5% CO2 (for HEp-2 cells and Vero cells). During 10 days of culture, cells were regularly collected for determining cell numbers, assessing morphological changes and bacterial location in cells by electron microscopy, and determining viable bacterial numbers according to the method described above.
Cell counts.
Cell suspensions of infected amoeba cultures were collected at 0, 1, 4, 7, and 10 days after infection. Infected mammalian cells were detached from plates using cell dissociation solution, trypsin-EDTA (Sigma), and were collected. Cell suspensions were then used to determine viable cell counts by the trypan blue dye exclusion method.
Fluorescent in situ hybridization (FISH).
Oligonucleotide probes Bn9658 (5'-TCC GTT TTC TCC GCC TAC-3'), specific for P. acanthamoebae 16S rRNA (3), and EUK516 (5'-ACC AGA CTT GCC CTC C-3'), targeted to eukaryote 18S rRNA (3), were used to confirm the location of bacteria in host cells. The Bn9658 probe and the EUK516 probe were labeled with Alexa Fluor 350 (Invitrogen Corporation, Carlsbad, CA) and Alexa Fluor 488 (Invitrogen Corporation), respectively. Hybridizations were performed for 90 min at 46°C, according to methods described previously (20).
TEM.
For transmission electron microscopy (TEM), cells were immersed in a fixative containing 3% glutaraldehyde in 0.1 M phosphate-buffered saline, pH 7.4, for 24 h at 4°C. After a brief wash with phosphate-buffered saline, they were processed for alcohol dehydration and embedding in Epon 813, as described previously (64). Ultrathin sections of cells were stained with lead citrate and uranium acetate before being viewed by electron microscopy.
Statistical analysis.
Statistical analysis was performed with the F test (variation on values for AID50) or with the unpaired Student t test (comparison on numbers of bacteria in culture). A P value of less than 0.05 was considered significant.

RESULTS
Establishment of quantification procedure.
Our experimental method is illustrated in Fig.
1. The method
consisted of freeze-thawing of the sample (to release bacteria
from host cells), infection and coculture with amoebae (to determine
AIDs), and drawing a sigmoid curve by a fitting process with
a logistic function formula (for calculating AIU).
The freeze-thawing method consistently ruptured mammalian cells
and amoebae in the trophozoite stage but not cysts (data not
shown). The optimal concentration of cycloheximide for keeping
the number of amoebae constant for 5 days after infection without
cytotoxicity was 200 µg/ml (data not shown). Figure
2A and B show representative images of DAPI-stained amoebae, with or
without bacterial infection. The infected amoebae were easily
distinguished from uninfected amoebae 2 days after infection.
At this time, there was no difference in the size or the number
of inclusions among infected amoebae. To confirm the DAPI staining
data, FISH analysis with probes specific to
P. acanthamoebae 16S rRNA was performed. As shown in Fig.
2C, D, and E, several
specific clusters of spots, indicating inclusions, were observed
in amoebae, indicating that the DAPI staining results were truly
reflective of bacterial growth within amoebae. Secondary infection,
via amoeba rupture, would make the accurate determination of
bacterial numbers very difficult. Therefore, we determined the
culture period that was less affected by secondary infection.
Figure
3 shows a representative variation of DAPI-stained amoebae,
with or without bacterial infection, during culture for up to
5 days. We observed no fluorescence particles outside amoebae
for up to 2 days after infection. Thereafter, the number of
particles outside amoebae increased with time, indicating that
cell ruptures could cause secondary infection. At the same time,
the number of amoebae decreased 3 days after infection, probably
due to amoeba lysis (data not shown). Thus, we concluded that
secondary infection in culture via amoeba rupture was minimal
for up to 2 days after infection.
Because the detection limit of the method can theoretically
change according to the number of amoebae seeded in wells, we
confirmed whether a change in the number of amoebae seeded in
wells adversely affected AID
50 values. A sample was serially
diluted and used to inoculate plates containing amoebae adjusted
to either 10
4 or 10
5 per well. Then, AID values were determined
following observation of DAPI staining, and two sigmoid curves
were drawn based on the AID values. By comparing these sigmoid
curves, we noted a rigorous declination with a log between the
two sigmoid curves drawn through the fitting process (Fig.
4A).
Thus, the numbers of amoebae seeded in wells were faithfully
reflected in the change of infectious rates, depending on the
concentration of bacteria in a sample. For drawing the sigmoid
curve, a four-parametric logistic function, which is theoretically
a symmetric curve with a cross-border value of AID
50, was introduced
(
19). This approach has the advantage that the curve can be
drawn by limited plots rising initially. As shown in Fig.
4B,
the variation of AID
50 that arose from different plot series
was found. However, by plugging four consecutive plots into
the function, including a value of more than 20% of the AID,
the variance among the values of AID
50 was minimal. Thus, the
established method defined as the AIU assay was a simple and
accurate method to quantify infective progeny of
P. acanthamoebae in host cells.
Growth of P. acanthamoebae within amoebae and mammalian epithelial cells.
To determine quantitatively the growth of
P. acanthamoebae within
amoebae and mammalian epithelial cells, the number of bacterial
infective progenies was assessed by the AIU assay for up to
10 days of culture. As shown in Fig.
5A, the numbers of bacteria
in culture with amoebae increased significantly during the first
4 days of cultivation with numbers of bacteria reaching approximately
1,000-fold the initial number. There was no difference between
the strains of amoebae that were used. Thereafter, bacterial
numbers in the cultures remained constant. In contrast, no increase
of bacterial numbers in the cultures with HEp-2 or Vero mammalian
cells was observed, nor did the number of bacteria in the bacterial
culture alone change significantly (Fig.
5B). In addition, the
bacterial infection did not show any significant cytotoxicity
to mammalian cells during culture, as determined by trypan blue
dye exclusion (data not shown).
Morphological analysis.
To confirm the accuracy of the AIU assay, the amoebae and mammalian
epithelial cells infected with bacteria were examined by TEM.
Figure
6 shows representative photo images of infected amoebae
and mammalian cells. Several inclusions were present in amoeba
infected with bacteria a day after inoculation, and the inclusions
frequently contained dividing RBs (Fig.
6A). Four days after
inoculation, enlarged inclusions were seen and the inclusions
mostly contained many mature EBs (Fig.
6B). Figure
6A (arrows)
also shows crescent bodies in inclusions, which are a specific
stage in the developmental cycle of
P. acanthamoebae, as reported
by Greub and Raoult (
29). In contrast, no typical inclusions
were observed in mammalian cells infected with bacteria (Fig.
6C and D). However, RB-like structures, which might represent
aberrant or persistent forms, were found in infected HEp-2 cells
(Fig.
6C). In infected Vero cells, bacteria wrapped in membranes
were seen, indicating an ongoing digestion of bacteria in vesicles
(Fig.
6D). Thus, these results supported the findings obtained
by the AIU assay that
P. acanthamoebae grew normally in amoebae,
but not in mammalian cells, such as HEp-2 and Vero cells.

DISCUSSION
Several assay systems for determining the number of
P. acanthamoebae bacteria inside host cells have been established (
10,
12,
13,
26,
27,
28,
45). The biological method originally proposed by
Greub et al. is based on the mean number of bacteria per target
cell or the highest dilution of bacteria that, via coculture
with amoebae, led to complete amoeba lysis (
27,
28). This quantification
method has been widely used for analyzing antibiotic susceptibility,
growth properties, and intracellular trafficking of
P. acanthamoebae in host cells (
13,
26,
27,
45). Recent work has demonstrated
a real-time PCR assay for the specific detection of
P. acanthamoebae DNA in samples (
10,
12). However, because these assay systems
are unlikely to accurately determine the number of viable bacteria
in cultures, further studies are needed to develop a simple
and accurate method to quantify
P. acanthamoebae, analogous
to the CFU assay for common bacteria. Thus, despite several
quantification methods, the gold standard method for measuring
infectious chlamydia progeny has traditionally been the IFU
assay, based on counting large inclusions formed in cells (
51).
However, because
P. acanthamoebae does not form typical inclusions
within host human cells and inclusions formed in infected amoebae
defined by fluorescence microscopic observation are relatively
small compared with those in HEp-2 cells infected with
C. pneumoniae and
C. trachomatis, a simple method based on the IFU assay is
not suitable (
15). We therefore established an alternative method
based on the rate of infection of amoebae, analogous to plaque-forming
ability commonly used in the quantification of virus. The calculation
of an index value of 50% infective rate has usually been performed
according to the Reed and Muench method (
52). However, these
methods are required to use a wide range of values from 0% to
100%, and the steps for determining the values were formidable.
Therefore, a four-parameter logistic function, as described
previously (
19), was introduced to the logistic fitting process.
The drawing of logistic sigmoid dilution curves and the determination
of AID
50 were performed by statistical software with the function
in general use (e.g., KaleidaGraph).
The freeze-thawing step is the easiest method to release bacteria from cells such as amoebae. Because it is known that amoebae easily shift from trophozoite to cyst form, which is a resistant form to prevent damage from environmental stress and which is difficult to destroy by physical damage such as that from detergent, ultrasonic treatment, and freeze-thawing (36), we selected amoeba strains that would resist changing from trophozoite to cyst form during the 10-day culture period. As a result, amoebae were ruptured efficiently in more than ca. 95% of the cells. Meanwhile, several amoeba strains (Acanthamoebae spp.) in our stock collection isolated from the natural environment easily became cysts over short culture periods, and bacterial release from such cysts was very difficult to achieve. Moreover, although the presence of P. acanthamoebae bacteria as cysts in the natural environment is not supported by the fact that P. acanthamoebae bacteria were not found within cysts of acanthamoebae (29), it is possible that amoeba cysts harboring bacteria may be present in the natural environment. Thus, to apply this method to quantify the number of P. acanthamoebae bacteria within amoebae in environmental samples such as soil and water, it is necessary to include an additional short culture step to induce the change from cysts to trophozoites before freeze-thawing.
Our method requires that only amoebae infected with bacteria be detected; therefore, the culture period is critical. Thus, we carefully examined an optimal culture period without secondary infection. As a result, the infected amoebae were clearly distinguished from uninfected amoebae at 2 days after inoculation, and the rupture of amoebae with secondary infection was minimal for up to 2 days after inoculation. In the present study, we used the C3 strain (ATCC 50739) of amoebae as host cells for determining AIDs, because the strain could be easily purchased and its traits were well characterized (3, 7, 41, 47, 48). However, if other strains of amoebae are used, it may be necessary to determine an optimal culture period without secondary infection.
The detection limit of the method is dependent on the number of amoebae seeded in each well of the 96-well plate. Because two different numbers (104 and 105) of amoebae were seeded, the detection limit of each set was 2 x 104 AIU and 2 x 105 AIU, respectively. Even when the probable bacterial number in a sample is low, the bacterial number can be theoretically determined by our method using amoebae seeded at lower levels. However, seeding at low levels requires plates with smaller wells to maintain infectious efficiency.
The monitoring of P. acanthamoebae in the amoeba culture by the AIU assay showed that the numbers of bacterial infective progeny in amoebae increased rapidly for up to 4 days after infection and that the bacterial numbers in the culture remained constant during the remaining period. In order to confirm replication and growth within amoebae, TEM studies were performed at 1 day or 4 days after infection. This showed vacuoles containing RBs, EBs, and/or crescent bodies in amoebae, indicating bacterial proliferation and growth. Thus, these morphological traits were in good agreement with previous reports (15, 29), indicating that the culture condition used was optimal and that the values determined by the AIU assay were reflected in growth properties of P. acanthamoebae within amoebae.
It is well known that acanthamoebae are distributed in a broad range of environments, such as in rivers and in soil (4, 35, 36, 40, 46, 55). Acanthamoeba species have been classified into 15 different genotypes (T1 to T15) (21, 32, 33, 62). It has been reported that the T4 genotype, rather than the other genotypes, was frequently present in the natural environment and that 90% of acanthamoeba isolates belong to the T4 genotype, which is the most likely genotype to express strong virulence against humans (36, 39). These findings suggest that there is a possible variation for supporting growth of P. acanthamoebae among genotypes. However, we found no difference among traits of infective progeny between isolates (data not shown). Thus, the genotypes of Acanthamoeba species may be unrelated to P. acanthamoebae growth.
Serological studies suggest that P. acanthamoebae, as well as other chlamydiae, such as Waddliaceae and Simkaniaceae species, is associated with lower respiratory tract infections and that humans are commonly exposed to this pathogen (15). Although morphological studies also showed that P. acanthamoebae could enter and multiply within human pneumocytes (A549 cells), lung fibroblasts (HEL cells), and macrophages (peripheral blood macrophages) (25, 27, 29), the accurate numbers of P. acanthamoebae bacteria within human cells remain to be determined. Although it has been reported that Vero cells sustain P. acanthamoebae replication, the growth in Vero cells is controversial because complete data are not available (3, 45). Therefore, P. acanthamoebae growth within mammalian cells, such as in HEp-2 cells and Vero cells, which are representative for epithelial cells, was monitored by the AIU assay. However, no increase of bacterial numbers in the culture of either cell line was found during the culture period, nor was there an increase of bacteria in the culture with bacteria alone. In order to confirm whether P. acanthamoebae can enter and multiply within such cells, TEM studies were performed. No typical inclusion-containing bacteria in infected cells were observed; however, unique structures in the cytoplasm of HEp-2 cells infected with bacteria, but not in that of uninfected cells, were observed. Such structures had a plasma membrane and were not surrounded by vesicles, like typical inclusions formed by chlamydiae. Interestingly, the traits observed appeared to be extremely similar to the morphological finding of chlamydiae in Drosophila melanogaster S2 cells, as reported by Elwell and Engel (18). This suggests that unique structures observed in the infected cells may be abnormal bodies defined as a persistent form that have differentiated from EBs and that are unable to form infectious progeny. This may explain the results obtained by the AIU assay, which showed unchanged bacterial numbers in culture. The reasons for persistent infection are unknown, but it may be speculated that mammalian cells respond to P. acanthamoebae infection and produce cytokines, which may to some degree control bacterial growth in the cells, even though a lack of cytokine response in human macrophages infected with P. acanthamoebae has been reported (25). In addition, bacteria wrapped in membranes in infected Vero cells were seen, indicating an ongoing digestion of bacteria in vesicles. This finding may imply that P. acanthamoebae can enter but not grow inside Vero cells.
We present a method to quantify the infective progeny of P. acanthamoebae, based on coculture with amoebae. The method is a promising tool for monitoring exact numbers of P. acanthamoebae bacteria within host cells, comparable to the IFU assay available for chlamydiae such as C. pneumoniae and C. trachomatis. We also believe that this method would be suitable for other chlamydiae present in the natural environment such as Waddliaceae and Simkaniaceae species. Thus, the method established in this study may be useful for understanding the dynamism of these chlamydiae with respect to potential human pathogen behavior.

ACKNOWLEDGMENTS
This work was supported by a grant-in-aid for scientific research
from the Waksman Foundation and the Asahi Glass Foundation of
Japan.
We thank Gilbert Greub (Institute of Microbiology, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland) for providing P. acanthamoebae DNA that we used to perform preliminary experiments.

FOOTNOTES
* Corresponding author. Mailing address: Department of Medical Laboratory Sciences, Faculty of Health Sciences, Hokkaido University, Nishi-5 Kita-12 Jo, Kita-ku, Sapporo, Hokkaido 060-0812, Japan. Phone and fax: 81-11-706-3326. E-mail:
hiroyuki{at}med.hokudai.ac.jp 
Published ahead of print on 29 August 2008. 

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Applied and Environmental Microbiology, October 2008, p. 6397-6404, Vol. 74, No. 20
0099-2240/08/$08.00+0 doi:10.1128/AEM.00841-08
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