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Applied and Environmental Microbiology, December 2008, p. 7145-7151, Vol. 74, No. 23
0099-2240/08/$08.00+0 doi:10.1128/AEM.00752-08
Copyright © 2008, American Society for Microbiology. All Rights Reserved.

Department of Plant Physiology and Molecular Biology, University of Plovdiv, 24 Tzar Assen Street, 4000 Plovdiv, Bulgaria,1 Department of Biochemistry, Wageningen University and Research Centre, P.O. Box 8128, 6700 ET Wageningen, The Netherlands,2 Business Unit Bioscience, Plant Research International B.V., Wageningen University and Research Centre, P.O. Box 16, 6700 AA Wageningen, The Netherlands3
Received 31 March 2008/ Accepted 23 September 2008
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Cry15Aa from B. thuringiensis serovar thompsoni (5) is a member of the Mtx2/3-like group, due to its similarity to the mosquitocidal Mtx2 and Mtx3 proteins from Bacillus sphaericus. Other members of this group, which are more similar to Cry15 than are Mtx2 and Mtx3, are the Cry23, -33, -38, and -45 proteins from B. thuringiensis. Their amino acid sequences show weak similarity to ß-barrel pore-forming, mammalian toxic proteins, such as aerolysin from Aeromonas hydrophila, cytotoxin from Pseudomonas aeruginosa, and epsilon toxin from Clostridium perfringens (9). Moreover, the three-dimensional structure of Cry23 with its binary partner Cry37 is similar to that of proaerolysin (22).
Cry15 protein, like its most similar putative homolog, Cry33 protein from B. thuringiensis serovar dakota (13), occurs naturally in a crystal together with an unrelated protein of approximately 40 kDa. The gene encoding Cry15's companion is arranged in an operon with cry15 (5). Not much is known of the potential insect target spectrum of Cry15. It was originally described as toxic to tobacco hornworm (Manduca sexta) and, with less detail, to small white larvae (Artogeia rapae, now Pieris rapae) and as not toxic to tobacco budworm (Heliothis virescens) or cabbage looper (Trichoplusia ni) (5). For M. sexta, the 40-kDa protein was reported to be not toxic, and it did not increase the toxicity of Cry15Aa (5). This appeared to be different for codling moth larvae (Cydia pomonella), in which the presence of the 40-kDa protein-encoding gene in B. thuringiensis increased the activity of Cry15Aa (20). Still, less is known of the modes of action of the Cry15Aa and 40-kDa proteins, studies of which were hampered by the failure to in vitro solubilize Cry15Aa/40-kDa protein crystals in a way that maintained their biological activities (5). In this article, we present the results of the biochemical characterizations of Cry15Aa and the 40-kDa protein expressed in B. thuringiensis serovar thompsoni HD542 as well as in a heterologous system, Escherichia coli, and their insecticidal properties. Solubilization of Cry15Aa/40-kDa protein crystals while retaining their biological activities was achieved, enabling a more detailed analysis of the contribution of the individual proteins in insecticidal activity and the role of solubilization and proteolytic activation therein.
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Crystal solubilization.
In order to test solubilization of the crystal/spore preparations, three different buffers were used as follows: for pH 6.0 and pH 7.0, phosphate-buffered saline (10 mM Na2HPO4/KH2PO4, 0.8% NaCl); for pH 8.0, pH 9.0, and pH 10.0, carbonate buffer (50 mM NaHCO3, 100 NaCl); and for pH 11.0, CAPS (3-cyclohexylamino-1-propanesulfonic acid) buffer (50 mM CAPS, 100 mM NaCl). The buffer set described above was prepared in duplicate, with and without 10 mM dithiotreitol (DTT), added prior to use. Crystal/spore samples were incubated in buffer at 37°C for 2 h with regular shaking, followed by centrifugation at 39,000 x g for 20 min. Solubilization efficiency was checked by SDS-PAGE comparison of supernatants before and after centrifugation.
Cloning and expression of the Cry15Aa- and 40-kDa protein-encoding genes and the Cry15Aa/40-kDa protein-encoding operon in E. coli.
For cloning of the Cry15Aa- and 40-kDa protein-encoding operon as well as of both genes individually, a PCR-based approach was used. For amplification of the open reading frames (ORFs) of Cry15Aa and 40-kDa protein, two sets of primers were designed: 34F (CATGCCATGGCAATTATGAATGATATTGC) and 34R (GGCGGATCCTATTCTTTATCATAATCGCGTTCATACTTC) for amplification of the cry15Aa gene, and 40F (CATGCCATGGATTTTAAACAATATCACAGG) and 40R (GGCGGATCCTAATCCATTACACCTATATTTCGTTG) for amplification of the 40-kDa protein-encoding ORF. The fragment encompassing the two consecutive ORFs was amplified using the 40F and 34R primers. Through these PCRs, an NcoI restriction site overlapping with the start codon was introduced, and a stop codon followed by a BamHI restriction site was introduced at the end of the coding sequence—at bp 1020 for cry15Aa, bp 930 for the 40-kDa protein-encoding ORF, and bp 1919 for the tandem combined Cry15/40-kDa protein-encoding ORFs. The PCR products were digested with NcoI and BamHI, run on a 0.8% agarose gel, excised and purified using a QIAEX II agarose gel extraction kit (Qiagen Benelux B.V., Venlo, The Netherlands), and subsequently used to replace the NcoI-BamHI-digested fragment (1,960 bp) of pMH10, described earlier (17), giving E. coli expression vectors pSN63 (cry15Aa), pSN64 (40-kDa protein-encoding gene), and pSN65 (Cry15Aa/40-kDa protein-encoding gene operon). Protein expression and partial purification from E. coli were performed as described earlier for three-domain Cry1 proteins (11).
Protease treatments.
To test the effect of trypsin and insect midgut proteases on partially purified and solubilized crystals or on Cry15Aa protein expressed in E. coli XL1-Blue, the samples were diluted to a final concentration of 1 mg/ml, and the pH was adjusted to 9.0 using 1 M Tris-HCl, pH 8.0. Next, 10% (wt/wt) trypsin was added, and the samples were incubated at 37°C for 1 h. Insect midgut extract preparations were done as follows: 25 mg of insect midguts was ground in a microcentrifuge tube and suspended in 100 µl of sterile distilled water. After centrifugation at 15,000 x g for 30 min at 4°C, the protein concentration of the supernatant was determined. Midgut extract was added to each solubilized crystal or protein preparation at a 10% (wt/wt) protein extract, and samples were incubated at room temperature in time intervals from 15 min to 24 h at room temperature. To prevent further proteolytic processing after this incubation, samples were immediately heated to 96°C in SDS-PAGE sample buffer containing 1 mM phenylmethylsulfonyl fluoride, 5 mM EDTA, and protease inhibitor cocktail ("Complete"; Boehringer Mannheim, Germany). The resulting products were analyzed on a 10% SDS-polyacrylamide gel and visualized using Coomassie brilliant blue R250 staining.
Proteomics.
N-terminal sequencing by Erdman degradation was performed by Cambridge peptides (Birmingham, United Kingdom). Native or C. pomonella midgut protease, as well as trypsin-treated solubilized Cry15 proteins, was run on a 10% SDS-polyacrylamide gel. Subsequently, the proteins were blotted onto a polyvinylidene difluoride membrane for 1 h at 50 V in 10 mM CAPS buffer, pH 11, with 10% (vol/vol) methanol. Protein bands were visualized by Coomassie brilliant blue R250 staining and excised for sequencing.
Insect bioassays.
To assess toxicity of preparations against Pieris rapae, leaves of Arabidopsis thaliana were used in a leaf dip bioassay by using the procedure described earlier for potato leaves (17). Briefly, single fresh A. thaliana ecotype Wassilewskija leaves were immersed in a test solution of Triton X-100 (0.05%) containing appropriate dilutions of proteins to be tested. After 10 s, these were taken out and allowed to dry on Whatman filter paper for 15 to 30 min at room temperature. Control leaves were immersed in test solution only. The leaves were then placed flat on water agar (0.6% agar in water) in individual plastic petri dishes. Five neonate larvae were placed on each leaf, and the experiment was replicated on different days. Mortality was scored after 4 days. Bioassays for M. sexta, Spodoptera exigua, or Helicoverpa armigera were performed with neonate larvae as described earlier (4). For Cydia pomonella, a diet surface contamination assay was used with an artificial diet, which has been described earlier (3). Fifty-percent lethal concentration (LC50; concentration giving 50% mortality) and its 95% fiducial limits were estimated by Probit analysis of the results from three or more independent experiments, using the PoloPC computer program (LeOra Software, Berkeley, CA) (21). For synergy testing of different Cry15/40-kDa protein ratios on C. pomonella larvae, 100 neonate larvae per dose per experiment were used, and the experiment was performed three times on different days.
Hemolysis assays.
Membrane pore formation by protein preparations was tested in a hemolysis assay using mouse erythrocytes. Mouse erythrocytes were pelleted from blood by centrifugation for 5 min at 1,000 x g and washed twice with Ringer solution (0.6% NaCl, 0.0075% KCl, 0.01% CaCl2, and 0.01% NaHCO3 [pH 7.5]). To each 100-µl erythrocyte suspension (4 x 108 cells per ml), different amounts of dialyzed protein samples were added, and the final volume was adjusted to 200 µl. Protein dialysis was done against 2 liters of solubilization buffer (50 mM NaHCO3, 100 NaCl [pH 10]) without DTT for 18 h at 4°C. Ten-kilodalton cutoff dialysis tubing was used (Pharmacia LKB, Sweden). Subsequently, the samples were incubated at 37°C for 1 h and centrifuged at 1,000 x g for 10 min, and the absorption of the supernatant at 415 nm was measured using a Jenway 6405UV/VIS spectrophotometer. Negative and 100% hemolysis controls were prepared in the way described above with addition of only Ringer solution instead of protein or Triton X-100 to a final concentration of 1%, respectively.
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TABLE 1. Insecticidal activities of Bacillus thuringiensis serovar thompsoni HD542 crystal and of Cry15 and 40-kDa proteins from recombinant E. coli strains
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FIG. 1. Solubilization of Bacillus thuringiensis serovar thompsoni HD542 crystals. Solubilization at the following pHs in the presence (panels A and B) and in the absence (panels C and D) of 10 mM DTT: pH 6.0 (lanes 1), pH 7.0 (lanes 2), pH 8.0 (lanes 3), pH 9.0 (lanes 4), pH 10.0 (lanes 5), and pH 11.0 (lanes 6). Panels A and C show proteins in the soluble fraction, and panels B and D represent the total protein fraction.
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Expression of Cry15Aa and 40-kDa proteins in E. coli, and their insecticidal activity.
Previous studies have indicated that detectable expression of Cry15 protein in B. thuringiensis requires the presence and expression of the 40-kDa protein-encoding gene (19), while in E. coli, both simultaneous expression of the two genes in one operon as well as expression of the two genes separately resulted in detectable proteins in inclusion bodies (5). In order to be able to separately study the roles of the two constituent proteins of the HD542 crystal in toxicities toward different insects, we expressed the cry15/40-kDa protein-encoding gene operon, as well as the cry15 and 40-kDa protein-encoding genes separately, in E. coli strain XL1-Blue. The standard fermentation and inclusion body purification procedures used for other delta-endotoxins yielded inclusion bodies containing either Cry15Aa, the 40-kDa protein, or both in more or less equal amounts, which were all soluble at pH 10. SDS-PAGE showed that the E. coli-produced proteins have the same relative molecular masses as the original B. thuringiensis-produced and solubilized crystal proteins (Fig. 2).
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FIG. 2. Cry15Aa and 40-kDa protein produced by recombinant E. coli strain XL1-Blue and by Bacillus thuringiensis. Inclusion bodies or crystals solubilized, at pH 10, Cry15Aa from E. coli (lane 1), 40-kDa protein from E. coli (lane 2), Cry15Aa and 40-kDa proteins produced by expression of the cry15Aa operon in E. coli (lane 3), and crystals from B. thuringiensis serovar thompsoni HD542 (lane 4).
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TABLE 2. Insecticidal activity of Cry15Aa at LC50 (9.5 ng cm–2) with the addition of different amounts of 40-kDa protein, produced from recombinant E. coli strainsa
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Proteolytic processing by insect gut proteases and bovine trypsin.
Cry1 proteins require proteolytic processing in the gut of susceptible insects to produce the "activated" toxin, which has receptor-binding and pore-forming capacities. We investigated possible proteolytic processing of solubilized HD542 crystal proteins as well as of the E. coli-produced Cry15 and 40-kDa proteins. Aliquots of solubilized proteins were incubated with dilute gut extracts from all five tested insects for different time periods, after which proteolytic action was stopped by the addition of SDS-PAGE sample buffer with added protease inhibitors and heat. A typical time course is shown for one insect, P. rapae, in Fig. 3. As can be seen in Fig. 3, the 40-kDa protein in solubilized HD542 crystals is rapidly processed to smaller forms (Fig. 3, lanes 2 to 9, from 15 min to 24 h of treatment, respectively), whereas Cry15 is processed more slowly. With the gut extract dilution used in this experiment, after 8 h of incubation (Fig. 3, lane 8) a protein with an apparent molecular mass of approximately 28 kDa formed, and it appeared to remain stable for at least 24 h (Fig. 3, lane 9). Processing by gut proteases from the other four tested insects showed a similar pattern overall (not shown). All gut proteases produced a major protein product with the same apparent molecular mass (Fig. 4A) after prolonged incubation of solubilized crystals, with variable amounts of minor processing intermediate of slightly higher molecular mass (for example, Fig. 4A, lane 4). Incubation of E. coli-produced, solubilized Cry15 protein resulted in apparently identical protein bands (Fig. 4B), suggesting that the visible proteolytic cleavage products from HD542 crystals consist of processed Cry15Aa only. This is supported by the observation that incubation of E. coli-produced, solubilized 40-kDa protein leaves no peptides with a molecular mass that may be detected by SDS-PAGE (not shown). Activation of Cry1 proteins by gut proteases can be mimicked by in vitro treatment with bovine trypsin (1). Similarly, treatment of solubilized HD542 crystals or solubilized Cry15Aa produced in E. coli with bovine trypsin yielded a protein with a slightly higher apparent molecular mass, as after treatment with gut proteases (Fig. 4A and B, lane 2).
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FIG. 3. Proteolytic processing of solubilized crystal proteins for 24 h by P. rapae gut extract. Solubilized HD542 crystals were incubated in diluted P. rapae gut juice and incubated at room temperature. At regular intervals, samples were removed and immediately boiled in SDS-PAGE sample buffer. Lane 1, 0 min; lane 2, 15 min; lane 3, 30 min; lane 4, 45 min; lane 5, 1 h; lane 6, 2 h; lane 7, 3 h; lane 8, 8 h; lane 9, 24 h.
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FIG. 4. Stable digestion products of Cry15Aa. Solubilized crystals produced by B. thuringiensis serovar thompsoni HD542 (A) or Cry15Aa produced by E. coli (B). Proteins were left untreated (lanes 1) or incubated with trypsin (lanes 2), P. rapae gut extract (lanes 3), C. pomonella gut extract (lanes 4), S. exigua gut extract (lanes 5), or H. armigera gut extract (lanes 6).
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We also tested the activity of the C. pomonella gut extract processing product of Cry15Aa, as shown in Fig. 4B (lane 4), against first-instar C. pomonella larvae. This product lacked any measurable activity, suggesting that the active form of Cry15Aa is a processing intermediate larger in size than the protease-resistant final product, produced after 24 h of treatment (Fig. 3, lane 9). Such intermediate forms, which may be more similar to the trypsin-processed Cry15Aa, can be seen to be formed during gut extract treatments of between 15 min and 8 h (Fig. 3, lanes 2 to 8).
Structural characterization of gut extract and trypsin-digested Cry15.
In order to understand the relation between protein primary structure and function as influenced by proteolytic processing, we characterized intact Cry15Aa and the major products from it by trypsin or C. pomonella gut protease action (Fig. 4B, lanes 2 and 4, respectively) in more detail. N-terminal sequencing revealed the sequence Met-Ala-Ile-Met-Asn for all three proteins. Since this sequence is identical to the predicted N-terminal sequence of intact Cry15, we conclude that neither trypsin nor C. pomonella gut proteases process Cry15Aa at its N terminus.
Nonspecific pore-forming activity of Cry15Aa and 40-kDa proteins in vitro.
To further characterize the mode of action of Cry15Aa and the role of the 40-kDa protein therein, we have tested the nonspecific pore-forming activity of Cry15Aa in its different forms in a hemolysis assay on mouse erythrocytes. As is shown in Fig. 5, both Cry15Aa and a combination of Cry15Aa and the 40-kDa protein demonstrated hemolytic activity. A strong increase in hemolytic activity was observed after trypsin and C. pomonella midgut extract treatment of the same samples. The lack of significant difference in the hemolytic activities of Cry15Aa and the 40-kDa protein produced together by expression of the full operon in E. coli and in that of Cry15Aa alone produced by expression of the cry15Aa gene (with equal amounts of Cry15 tested) (Fig. 5A and B) showed that the presence of the 40-kDa protein did not change the hemolytic activity of Cry15Aa. Both trypsin preincubation as well as gut extract treatment increased hemolytic activity, in contrast to in vivo activity assays, in which complete gut extract processing resulted in loss of insecticidal activity.
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FIG. 5. In vitro hemolytic activities of Cry15Aa and 40-kDa protein. Hemolysis measured by absorption at 415 nm in mouse erythrocyte supernatant, expressed as percentage of absorption at complete hemolysis obtained with 1% Triton X-100. Concentrations are based on Cry15 content only, solubilized E. coli-produced Cry15Aa plus 40-kDa protein (cry15Aa operon; panel A), or Cry15Aa only (panel B). Protein was untreated ( ), pretreated with trypsin ( ), or pretreated with C. pomonella gut juice ( ).
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FIG. 6. Protein sequence alignment of the Bacillus thuringiensis Mtx2/3-like proteins. The S/T-rich regions flanking the putative pore-lining loop are underlined. A putative trypsin-processing site used by trypsin in vitro is indicated by an arrow.
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Our preliminary structural and functional characterizations of the trypsin- and insect gut protease-treated Cry15Aa strongly suggest that (limited) C-terminal processing is necessary for insecticidal activity. Trypsin treatment of Cry15Aa resulted in a protein with an N-terminal sequence identical to that of unprocessed Cry15Aa, indicative of exclusively C-terminal processing. Preliminary quadrupole-time of flight analysis of in-gel trypsin-treated intact or trypsin-preincubated Cry15Aa suggests that the processing occurs at lysine residue 300 or 301, resulting in a protein of 32.45 or 32.59 kDa, respectively (results not shown). This would be in good agreement with the estimated molecular mass of 31 kDa observed during gel electrophoresis. This processing removes a 40-amino-acid-residue-long C-terminal extension of Cry15Aa compared to the other proteins of its similarity group (Fig. 6). This extension is rich in arginines and lysines, which make it particularly susceptible to trypsin degradation. Curiously, in this extension, positively and negatively charged amino acids alternate, which could result in opposite charges on the sides of the protein chain or β-sheet. Trypsin treatment also resulted in increased hemolytic activity. Together, these results show that Cry15Aa is activated by C-terminal processing similar to what was shown earlier for alpha-toxin (2) and aerolysin (12). Whereas an intermediary product with a size comparable to that of trypsin-treated Cry15Aa was observed during insect gut protease treatment, the final processing product was smaller, indicating that, with no N-terminal processing, gut proteases could process more extensively at the C-terminal side of Cry15Aa, possibly through the action of chymotrypsin-like proteases. Whereas Cydia gut protease-treated Cry15Aa retained hemolytic activity, insecticidal activity was lost. This suggests that for some aspects of insect-specific activity, such as possible receptor binding, the C-terminal protein sequence around or just in front of residue 300 is essential.
In conclusion, we have characterized the first steps in the mode of action of Cry15Aa, a relatively less-known member of the extended and diverse Cry protein (or Bt toxin) family. Based on the biochemical properties of similar microbial proteins like alpha-toxin and aerolysin, we can speculate that further steps include receptor binding, oligomerization, and pore formation, but this awaits further experimentation.
S.N. was supported by a fellowship from The Netherlands Organization for Scientific Research (NWO) International Fellowship Program for Romanian and Bulgarian postdoctorates. R.B. was partially supported by a short-term scientific mission fellowship from the EU program COST862, "Bacterial Toxins for Insect Control."
Published ahead of print on 3 October 2008. ![]()
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