This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Blackburn, N.
Right arrow Articles by Bjørnsen, P. K.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Blackburn, N.
Right arrow Articles by Bjørnsen, P. K.
Agricola
Right arrow Articles by Blackburn, N.
Right arrow Articles by Bjørnsen, P. K.

 Previous Article  |  Next Article 

Applied and Environmental Microbiology, September 1998, p. 3246-3255, Vol. 64, No. 9
0099-2240/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.

Rapid Determination of Bacterial Abundance, Biovolume, Morphology, and Growth by Neural Network-Based Image Analysis

Nicholas Blackburn,1,* Åke Hagström,2,dagger Johan Wikner,3 Rocio Cuadros-Hansson,3 and Peter Koefoed Bjørnsen2

Marine Biological Laboratory, DK-3000 Helsingør,1 and National Environmental Research Institute, DK-4000 Roskilde,2 Denmark, and Umeå Marina Forskningscentrum, Norrbyn, S-910 20 Hörnefors, Sweden3

Received 20 November 1997/Accepted 27 May 1998

Annual bacterial plankton dynamics at several depths and locations in the Baltic Sea were studied by image analysis. Individual bacteria were classified by using an artificial neural network which also effectively identified nonbacterial objects. Cell counts and frequencies of dividing cells were determined, and the data obtained agreed well with visual observations and previously published values. Cell volumes were measured accurately by comparison with bead standards. The survey included 690 images from a total of 138 samples. Each image contained approximately 200 bacteria. The images were analyzed automatically at a rate of 100 images per h. Bacterial abundance exhibited coherent patterns with time and depth, and there were distinct subsurface peaks in the summer months. Four distinct morphological classes were resolved by the image analyzer, and the dynamics of each could be visualized. The bacterial growth rates estimated from frequencies of dividing cells were different from the bacterial growth rates estimated by the thymidine incorporation method. With minor modifications, the image analysis technique described here can be used to analyze other planktonic classes.


* Corresponding author. Mailing address: Marine Biological Laboratory, Strandpromenaden 5, DK-3000 Helsingør, Denmark. Phone: 45 49211633, ext. 326. Fax: 45 49261165. E-mail: mblnb{at}mail.centrum.dk.

dagger Present address: Kalmar University, S-39129 Kalmar, Sweden.


Applied and Environmental Microbiology, September 1998, p. 3246-3255, Vol. 64, No. 9
0099-2240/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.



This article has been cited by other articles:

  • Zhou, Z., Pons, M. N., Raskin, L., Zilles, J. L. (2007). Automated Image Analysis for Quantitative Fluorescence In Situ Hybridization with Environmental Samples. Appl. Environ. Microbiol. 73: 2956-2962 [Abstract] [Full Text]  
  • Samuelsson, K., Berglund, J., Andersson, A. (2006). Factors structuring the heterotrophic flagellate and ciliate community along a brackish water primary production gradient. J PLANKTON RES 28: 345-359 [Abstract] [Full Text]  
  • Bouvy, M., Pagano, M., M'Boup, M., Got, P., Troussellier, M. (2006). Functional structure of microbial food web in the Senegal River Estuary (West Africa): impact of metazooplankton. J PLANKTON RES 28: 195-207 [Abstract] [Full Text]  
  • Berglund, J., Samuelsson, K., Kull, T., Muren, U., Andersson, A. (2005). Relative strength of resource and predation limitation of heterotrophic nanoflagellates in a low-productive sea area. J PLANKTON RES 27: 923-935 [Abstract] [Full Text]  
  • Brehm-Stecher, B. F., Johnson, E. A. (2004). Single-Cell Microbiology: Tools, Technologies, and Applications. Microbiol. Mol. Biol. Rev. 68: 538-559 [Abstract] [Full Text]  
  • Johansson, M., Gorokhova, E., Larsson, U. (2004). Annual variability in ciliate community structure, potential prey and predators in the open northern Baltic Sea proper. J PLANKTON RES 26: 67-80 [Abstract] [Full Text]  
  • Pernthaler, J., Pernthaler, A., Amann, R. (2003). Automated Enumeration of Groups of Marine Picoplankton after Fluorescence In Situ Hybridization. Appl. Environ. Microbiol. 69: 2631-2637 [Abstract] [Full Text]  
  • Krause, D. O., Smith, W. J. M., Conlan, L. L., Gough, J. M., Anna Williamson, M., McSweeney, C. S. (2003). Diet influences the ecology of lactic acid bacteria and Escherichia coli along the digestive tract of cattle: neural networks and 16S rDNA. Microbiology 149: 57-65 [Abstract] [Full Text]  
  • Kisand, V., Cuadros, R., Wikner, J. (2002). Phylogeny of Culturable Estuarine Bacteria Catabolizing Riverine Organic Matter in the Northern Baltic Sea. Appl. Environ. Microbiol. 68: 379-388 [Abstract] [Full Text]  
  • Eguchi, M., Ostrowski, M., Fegatella, F., Bowman, J., Nichols, D., Nishino, T., Cavicchioli, R. (2001). Sphingomonas alaskensis Strain AFO1, an Abundant Oligotrophic Ultramicrobacterium from the North Pacific. Appl. Environ. Microbiol. 67: 4945-4954 [Abstract] [Full Text]  
  • Kuwae, T., Hosokawa, Y. (1999). Determination of Abundance and Biovolume of Bacteria in Sediments by Dual Staining with 4',6-Diamidino-2-Phenylindole and Acridine Orange: Relationship to Dispersion Treatment and Sediment Characteristics. Appl. Environ. Microbiol. 65: 3407-3412 [Abstract] [Full Text]