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Applied and Environmental Microbiology, October 1999, p. 4451-4457, Vol. 65, No. 10
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.

Pelagic-Benthic Coupling of Nucleic Acids in an Abyssal Location of the Northeastern Atlantic Ocean

A. Dell'Anno,1 M. Fabiano,2 M. L. Mei,1 and R. Danovaro1,3,*

Institute of Marine Science, University of Ancona, 60131 Ancona,1 Department for the Study of the Territory and Its Resources, University of Genoa, 16132 Genoa,2 and Department of Zoology, University of Bari, 70125 Bari,3 Italy

Received 13 May 1999/Accepted 6 August 1999

Spatial and temporal changes in sedimentary nucleic acid concentrations in an abyssal locality of the northeastern Atlantic Ocean were investigated in relation to fluxes of nucleic acids produced in the photic layer. Sediment trap material, collected between 1996 and 1998 at depths of 1,000, 3,000, and 4,700 m, and sediment samples were analyzed for DNA and RNA content. Nucleic acid concentrations in the sediments were very high and displayed significant temporal changes, whereas mesoscale variability was low. DNA and RNA concentrations generally displayed opposite temporal patterns, which are likely to be dependent on the nature and characteristics of DNA and RNA molecules. Nucleic acid fluxes were high and displayed clear seasonal changes apparently coupled with seasonal pulses of primary production. However, while median values of DNA fluxes were relatively similar in all sediment traps, median values of RNA fluxes almost doubled from the 1,000- to the 4,700-m depth, suggesting differences in the metabolic activity of microbes associated with sinking particles. Significant relationships between DNA concentrations in the sediments and DNA fluxes and between RNA concentrations and RNA fluxes, indicating the presence of a clear pelagic-benthic coupling of particulate nucleic acids, were observed. The benthic system investigated was not steady state since we estimated that, from September 1996 to October 1998, nucleic acid concentration in the sediments decreased by about 165 mg of DNA m-2. Vertical profiles revealed a significant decrease in DNA concentration with depth in the sediments, reaching an asymptotic value of about 5 µg g-1. This DNA fraction constitutes a pool of potentially refractory DNA (accounting for 16 to 40% of the total DNA pool) that might be buried in the sediments.


* Corresponding author. Mailing address: Institute of Marine Science, University of Ancona, Via Brecce Bianche, 60131 Ancona, Italy. Phone: 39 71 220 4654. Fax: 39 71 220 4650. E-Mail: danovaro{at}popcsi.unian.it.


Applied and Environmental Microbiology, October 1999, p. 4451-4457, Vol. 65, No. 10
0099-2240/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.



This article has been cited by other articles:

  • Dell'Anno, A., Corinaldesi, C., Stavrakakis, S., Lykousis, V., Danovaro, R. (2005). Pelagic-Benthic Coupling and Diagenesis of Nucleic Acids in a Deep-Sea Continental Margin and an Open-Slope System of the Eastern Mediterranean. Appl. Environ. Microbiol. 71: 6070-6076 [Abstract] [Full Text]  
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