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Applied and Environmental Microbiology, September 2000, p. 4131-4135, Vol. 66, No. 9
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.

Rapid 5' Nuclease (TaqMan) Assay for Detection of Virulent Strains of Yersinia enterocolitica†

A. Vishnubhatla,1 D. Y. C. Fung,*,1 R. D. Oberst,2 M. P. Hays,2 T. G. Nagaraja,3 and S. J. A. Flood4

Department of Animal Sciences and Industry,1 Food Animal Health and Management Center,2 and Department of Diagnostic Medicine and Pathobiology,3 Kansas State University, Manhattan, Kansas 66506, and Applied Biosystems Division, Perkin-Elmer Corporation, Foster City, California 944044

Received 9 December 1999/Accepted 19 June 2000

We have developed a rapid procedure for the detection of virulent Yersinia enterocolitica in ground pork by combining a previously described PCR with fluorescent dye technologies. The detection method, known as the fluorogenic 5' nuclease assay (TaqMan), produces results by measuring the fluorescence produced during PCR amplification, requiring no post-PCR processing. The specificity of the chromosomal yst gene-based assay was tested with 28 bacterial isolates that included 7 pathogenic and 7 nonpathogenic serotypes of Y. enterocolitica, other species of Yersinia (Y. aldovae, Y. pseudotuberculosis, Y. mollaretti, Y. intermedia, Y. bercovieri, Y. ruckeri, Y. frederiksenii, and Y. kristensenii), and other enteric bacteria (Escherichia, Salmonella, Citrobacter, and Flavobacterium). The assay was 100% specific in identifying the pathogenic strains of Y. enterocolitica. The sensitivity of the assay was found to be >= 102 CFU/ml in pure cultures and >= 103 CFU/g in spiked ground pork samples. Results of the assay with food enrichments prespiked with Y. enterocolitica serotypes O:3 and O:9 were comparable to standard culture results. Of the 100 field samples (ground pork) tested, 35 were positive for virulent Y. enterocolitica with both 5' nuclease assay and conventional virulence tests. After overnight enrichment the entire assay, including DNA extraction, amplification, and detection, could be completed within 5 h.


* Corresponding author. Mailing address: Department of Animal Sciences and Industry, College of Agriculture, Kansas State University, 225 Call Hall, Manhattan, KS 66502. Phone: (785) 532-5654. Fax: (785) 532-5681. E-mail: DFUNG{at}oz.ozNET.KSU.edu.

dagger Contribution no. 00-171-J from the Kansas Agricultural Experiment Station.


Applied and Environmental Microbiology, September 2000, p. 4131-4135, Vol. 66, No. 9
0099-2240/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.



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