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Applied and Environmental Microbiology, January 2001, p. 396-402, Vol. 67, No. 1
Centre for Plant Biodiversity Research, CSIRO
Plant Industry, Canberra ACT 2601, Australia
Received 3 July 2000/Accepted 25 September 2000
The structure of rhizobial communities nodulating
Acacia in southeastern Australia from south Queensland to
Tasmania was investigated by a molecular approach. A total of 118 isolates from nodule samples from 13 different Acacia
species collected at 44 sites were characterized by small-subunit (SSU)
ribosomal DNA (rDNA) PCR-restriction fragment length polymorphism
analysis. Nine rhizobial genomospecies were identified, and these taxa
corresponded to previously described genomospecies (B. Lafay and
J. J. Burdon, Appl. Environ. Microbiol. 64:3989-3997, 1998).
Eight of these genomospecies belonged to the Bradyrhizobium
lineage and accounted for 96.6% of the isolates. The remaining
genomospecies corresponded to Rhizobium tropici. For
analysis of geographic patterns, results were grouped into five
latitudinal regions regardless of host origin. In each region, as
observed previously for rhizobial isolates taken from
non-Acacia legumes (Lafay and Burdon, Appl. Environ.
Microbiol. 64:3989-3997, 1998), rhizobial communities were dominated
by one or two genomospecies, the identities of which varied from place
to place. Despite this similarity in patterns, the most abundant
genomospecies for Acacia isolates differed from the
genomospecies found in the non-Acacia-derived rhizobial
collection, suggesting that there is a difference in nodulation
patterns of the Mimosoideae and the Papilionoideae. Only two
genomospecies were both widespread and relatively abundant across the
range of sites sampled. Genomospecies A was found in all regions except
the most northern sites located in Queensland, whereas genomospecies B
was not detected in Tasmania. This suggests that genomospecies A might
be restricted to the more temperate regions of Australia, whereas in
contrast, genomospecies B occurs in different climatic and edaphic
conditions across the whole continent. The latter hypothesis is
supported by the presence of genomospecies B in southwestern Australia,
based on partial SSU rDNA sequence data (N. D. S. Marsudi,
A. R. Glenn, and M. J. Dilworth, Soil Biol. Biochem.
31:1229-1238, 1998).
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.1.396-402.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Small-Subunit rRNA Genotyping of Rhizobia
Nodulating Australian Acacia spp.
*
Corresponding author. Present address: Centre
d'Océanologie de Marseille, CNRS-UMR 6540, Station Marine
d'Endoume, rue Batterie des Lions, 13007 Marseille, France. Phone: 33 (0)491 041660. Fax: 33 (0)491 041635. E-mail:
lafay{at}com.univ-mrs.fr.
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