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Applied and Environmental Microbiology, October 2001, p. 4734-4741, Vol. 67, No. 10
Department of Ecological Microbiology,
BITOEK,1 and Electron Microscopy
Laboratory,3 University of Bayreuth, 95440 Bayreuth, Germany, and Gulf Ecology Division, US EPA/NHEERL,
Gulf Breeze, Florida 325612
Received 24 April 2001/Accepted 31 July 2001
An anaerobic, H2-utilizing bacterium, strain RD-1, was
isolated from the highest growth-positive dilution series of a root homogenate prepared from the sea grass Halodule
wrightii. Cells of RD-1 were gram-positive, spore-forming,
motile rods that were linked by connecting filaments. Acetate was
produced in stoichiometries indicative of an acetyl coenzyme A
(acetyl-CoA) pathway-dependent metabolism when RD-1 utilized
H2-CO2, formate, lactate, or pyruvate. Growth
on sugars or ethylene glycol yielded acetate and ethanol as end
products. RD-1 grew at the expense of glucose in the presence of low
initial concentrations (up to 6% [vol/vol]) of O2 in the headspace of static, horizontally incubated culture tubes; the concentration of O2 decreased during growth in such
cultures. Peroxidase, NADH oxidase, and superoxide dismutase activities were detected in the cytoplasmic fraction of cells grown in the presence of O2. In comparison to cultures incubated under
strictly anoxic conditions, acetate production decreased, higher
amounts of ethanol were produced, and lactate and H2 became
significant end products when RD-1 was grown on glucose in the presence
of O2. Similarly, when RD-1 was grown on fructose in the
presence of elevated salt concentrations, lower amounts of acetate and higher amounts of ethanol and H2 were produced. When the
concentration of O2 in the headspace exceeded 1%
(vol/vol), supplemental H2 was not utilized. The 16S rRNA
gene of RD-1 had a 99.7% sequence similarity to that of
Clostridium glycolicum DSM 1288T, an
organism characterized as a fermentative anaerobe. Comparative experiments with C. glycolicum DSM
1288T demonstrated that it had negligible H2-
and formate-utilizing capacities. However, carbon monoxide
dehydrogenase was detected in both RD-1 and C.
glycolicum DSM 1288T. A 91.4% DNA-DNA
hybridization between the genomic DNA of RD-1 and that of
C. glycolicum DSM 1288T
confirmed that RD-1 was a strain of C.
glycolicum. These results indicate that (i) RD-1
metabolizes certain substrates via the acetyl-CoA pathway, (ii) RD-1
can tolerate and consume limited amounts of O2, (iii) oxic
conditions favor the production of ethanol, lactate, and H2
by RD-1, and (iv) the ability of RD-1 to cope with limited amounts of
O2 might contribute to its survival in a habitat subject to
daily gradients of photosynthesis-derived O2.
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.10.4734-4741.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Physiological Ecology of Clostridium
glycolicum RD-1, an Aerotolerant Acetogen Isolated from Sea
Grass Roots
*
Corresponding author. Mailing address: Department of
Ecological Microbiology, BITOEK, University of Bayreuth, 95440 Bayreuth, Germany. Phone: [49] (0)921-555 642. Fax: [49] (0)921-555
799. E-mail: kirsten.kuesel{at}bitoek.uni-bayreuth.de.
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