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Applied and Environmental Microbiology, August 2001, p. 3418-3425, Vol. 67, No. 8
BIOMERIT Research Centre, Microbiology
Department, National University of Ireland, Cork,
Ireland1; UMR CNRS Ecologie Microbienne,
Université Claude Bernard (Lyon 1), 69622 Villeurbanne Cedex,
France2; and Abteilung Biologische
Sicherheit, TÜV Bau und Betrieb GmbH, D-79108 Freiburg,
Germany3
Received 21 November 2000/Accepted 8 May 2001
The impact of the 2,4-diacetylphloroglucinol-producing biocontrol
agent Pseudomonas fluorescens F113Rif on the diversity
of the resident community of culturable fluorescent pseudomonads associated with the roots of field-grown sugar beet seedlings was
evaluated. At 19 days after sowing, the seed inoculant F113Rif had
replaced some of the resident culturable fluorescent pseudomonads at
the rhizoplane but had no effect on the number of these bacteria in the
rhizosphere. A total of 498 isolates of resident fluorescent pseudomonads were obtained and characterized by molecular means at the
level of broad phylogenetic groups (by amplified ribosomal DNA
restriction analysis) and at the strain level (with random amplified
polymorphic DNA markers) as well as phenotypically (55 physiological
tests). The introduced pseudomonad induced a major shift in the
composition of the resident culturable fluorescent Pseudomonas community, as the percentage of rhizoplane
isolates capable of growing on three carbon substrates (erythritol,
adonitol, and L-tryptophan) not assimilated by the
inoculant was increased from less than 10% to more than 40%. However,
the pseudomonads selected did not display enhanced resistance to
2,4-diacetylphloroglucinol. The shift in the resident populations,
which was spatially limited to the surface of the root (i.e., the
rhizoplane), took place without affecting the relative proportions of
phylogenetic groups or the high level of strain diversity of the
resident culturable fluorescent Pseudomonas community.
These results suggest that the root-associated
Pseudomonas community of sugar beet seedlings is
resilient to the perturbation that may be caused by a taxonomically related inoculant.
0099-2240/01/$04.00+0 DOI: 10.1128/AEM.67.8.3418-3425.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Impact of 2,4-Diacetylphloroglucinol-Producing Biocontrol Strain
Pseudomonas fluorescens F113 on Intraspecific
Diversity of Resident Culturable Fluorescent Pseudomonads Associated
with the Roots of Field-Grown Sugar Beet Seedlings
*
Corresponding author. Mailing address: BIOMERIT
Research Centre, Microbiology Department, National University of
Ireland, Cork, Ireland. Phone: 353 21 4272097. Fax: 353 21 4275934. E-mail: f.ogara{at}ucc.ie.
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