AEM -- Table of Contents (July 15 2007, 73 [14])

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Contents: July 2007, Volume 73, Issue 14

       Minireviews

       Public Health Microbiology

       Genetics and Molecular Biology

       Microbial Ecology

       Environmental Microbiology

       Physiology and Biotechnology

       Methods

       Food Microbiology

       Mycology

       Enzymology and Protein Engineering

       Evolutionary and Genomic Microbiology

       Plant Microbiology

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Minireviews:

Biochemical and Ecological Control of Geosmin and 2-Methylisoborneol in Source Waters
Friedrich Jüttner and Susan B. Watson
Appl. Environ. Microbiol. July 2007 73: 4395-4406; published ahead of print March 30, 2007, doi:10.1128/AEM.02250-06
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Public Health Microbiology:

Development and Application of Real-Time PCR Assays for Quantification of erm Genes Conferring Resistance to Macrolides-Lincosamides-Streptogramin B in Livestock Manure and Manure Management Systems
Jing Chen, Zhongtang Yu, Frederick C. Michel, Jr., Thomas Wittum, and Mark Morrison
Appl. Environ. Microbiol. July 2007 73: 4407-4416; published ahead of print May 11, 2007, doi:10.1128/AEM.02799-06
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Enteric Virus Survival during Household Laundering and Impact of Disinfection with Sodium Hypochlorite
Charles P. Gerba and Denise Kennedy
Appl. Environ. Microbiol. July 2007 73: 4425-4428; published ahead of print May 25, 2007, doi:10.1128/AEM.00688-07
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Evaluation of Liquid- and Fog-Based Application of Sterilox Hypochlorous Acid Solution for Surface Inactivation of Human Norovirus
Geun Woo Park, Deyanna M. Boston, Julie A. Kase, Mark N. Sampson, and Mark D. Sobsey
Appl. Environ. Microbiol. July 2007 73: 4463-4468; published ahead of print May 4, 2007, doi:10.1128/AEM.02839-06
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Source Tracking Aerosols Released from Land-Applied Class B Biosolids during High-Wind Events
Carolina Baertsch, Tania Paez-Rubio, Emily Viau, and Jordan Peccia
Appl. Environ. Microbiol. July 2007 73: 4522-4531; published ahead of print May 18, 2007, doi:10.1128/AEM.02387-06
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Bacteriophage Therapy To Reduce Salmonella Colonization of Broiler Chickens
R. J. Atterbury, M. A. P. Van Bergen, F. Ortiz, M. A. Lovell, J. A. Harris, A. De Boer, J. A. Wagenaar, V. M. Allen, and P. A. Barrow
Appl. Environ. Microbiol. July 2007 73: 4543-4549; published ahead of print May 25, 2007, doi:10.1128/AEM.00049-07
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Extended-Spectrum ß-Lactamase CTX-M-1 in Escherichia coli Isolates from Healthy Poultry in France
Delphine Girlich, Laurent Poirel, Alessandra Carattoli, Isabelle Kempf, Marie-Frédérique Lartigue, Alessia Bertini, and Patrice Nordmann
Appl. Environ. Microbiol. July 2007 73: 4681-4685; published ahead of print May 18, 2007, doi:10.1128/AEM.02491-06
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Genetics and Molecular Biology:

Comparative Sequence Analysis of Plasmids from Lactobacillus delbrueckii and Construction of a Shuttle Cloning Vector
Ju-Hoon Lee, Jamie S. Halgerson, Jeong-Hwan Kim, and Daniel J. O'Sullivan
Appl. Environ. Microbiol. July 2007 73: 4417-4424; published ahead of print May 25, 2007, doi:10.1128/AEM.00099-07
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Nucleotide Sequence of Plasmid pCNB1 from Comamonas Strain CNB-1 Reveals Novel Genetic Organization and Evolution for 4-Chloronitrobenzene Degradation
Ying-Fei Ma, Jian-Feng Wu, Sheng-Yue Wang, Cheng-Ying Jiang, Yun Zhang, Su-Wei Qi, Lei Liu, Guo-Ping Zhao, and Shuang-Jiang Liu
Appl. Environ. Microbiol. July 2007 73: 4477-4483; published ahead of print May 25, 2007, doi:10.1128/AEM.00616-07
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Development of Experimental Genetic Tools for Campylobacter fetus
Sabine Kienesberger, Gregor Gorkiewicz, Martina M. Joainig, Sylvia R. Scheicher, Eva Leitner, and Ellen L. Zechner
Appl. Environ. Microbiol. July 2007 73: 4619-4630; published ahead of print May 18, 2007, doi:10.1128/AEM.02407-06
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Microbial Ecology:

Viral Abundance, Decay, and Diversity in the Meso- and Bathypelagic Waters of the North Atlantic
Verónica Parada, Eva Sintes, Hendrik M. van Aken, Markus G. Weinbauer, and Gerhard J. Herndl
Appl. Environ. Microbiol. July 2007 73: 4429-4438; published ahead of print May 11, 2007, doi:10.1128/AEM.00029-07
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Ecological Genomics of Marine Roseobacters
M. A. Moran, R. Belas, M. A. Schell, J. M. González, F. Sun, S. Sun, B. J. Binder, J. Edmonds, W. Ye, B. Orcutt, E. C. Howard, C. Meile, W. Palefsky, A. Goesmann, Q. Ren, I. Paulsen, L. E. Ulrich, L. S. Thompson, E. Saunders, and A. Buchan
Appl. Environ. Microbiol. July 2007 73: 4559-4569; published ahead of print May 25, 2007, doi:10.1128/AEM.02580-06
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Molecular Characterization of Potential Microcystin-Producing Cyanobacteria in Lake Ontario Embayments and Nearshore Waters
A. M. Hotto, M. F. Satchwell, and G. L. Boyer
Appl. Environ. Microbiol. July 2007 73: 4570-4578; published ahead of print May 25, 2007, doi:10.1128/AEM.00318-07
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Microbial Diversity in Natural Asphalts of the Rancho La Brea Tar Pits
Jong-Shik Kim and David E. Crowley
Appl. Environ. Microbiol. July 2007 73: 4579-4591; published ahead of print April 6, 2007, doi:10.1128/AEM.01372-06
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Postinoculation Protozoan Establishment and Association Patterns of Methanogenic Archaea in the Ovine Rumen
Samuel Ohene-Adjei, Ronald M. Teather, Michael Ivan, and Robert J. Forster
Appl. Environ. Microbiol. July 2007 73: 4609-4618; published ahead of print May 18, 2007, doi:10.1128/AEM.02687-06
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Potential Interactions of Particle-Associated Anammox Bacteria with Bacterial and Archaeal Partners in the Namibian Upwelling System
Dagmar Woebken, Bernhard M. Fuchs, Marcel M. M. Kuypers, and Rudolf Amann
Appl. Environ. Microbiol. July 2007 73: 4648-4657; published ahead of print May 25, 2007, doi:10.1128/AEM.02774-06
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Environmental Microbiology:

Expression of Reductive Dehalogenase Genes in Dehalococcoides ethenogenes Strain 195 Growing on Tetrachloroethene, Trichloroethene, or 2,3-Dichlorophenol
Jennifer M. Fung, Robert M. Morris, Lorenz Adrian, and Stephen H. Zinder
Appl. Environ. Microbiol. July 2007 73: 4439-4445; published ahead of print May 18, 2007, doi:10.1128/AEM.00215-07
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Physiology and Biotechnology:

Engineering of the Yeast Yarrowia lipolytica for the Production of Glycoproteins Lacking the Outer-Chain Mannose Residues of N-Glycans
Yunkyoung Song, Min Hee Choi, Jeong-Nam Park, Moo Woong Kim, Eun Jung Kim, Hyun Ah Kang, and Jeong-Yoon Kim
Appl. Environ. Microbiol. July 2007 73: 4446-4454; published ahead of print May 18, 2007, doi:10.1128/AEM.02058-06
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Carvacrol Induces Heat Shock Protein 60 and Inhibits Synthesis of Flagellin in Escherichia coli O157:H7
Sara A. Burt, Ruurd van der Zee, Ad P. Koets, Anko M. de Graaff, Frans van Knapen, Wim Gaastra, Henk P. Haagsman, and Edwin J. A. Veldhuizen
Appl. Environ. Microbiol. July 2007 73: 4484-4490; published ahead of print May 25, 2007, doi:10.1128/AEM.00340-07
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Mutations of the Corynebacterium glutamicum NCgl1221 Gene, Encoding a Mechanosensitive Channel Homolog, Induce L-Glutamic Acid Production
Jun Nakamura, Seiko Hirano, Hisao Ito, and Masaaki Wachi
Appl. Environ. Microbiol. July 2007 73: 4491-4498; published ahead of print May 18, 2007, doi:10.1128/AEM.02446-06
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Novel Redox Potential-Based Screening Strategy for Rapid Isolation of Klebsiella pneumoniae Mutants with Enhanced 1,3-Propanediol-Producing Capability
Chenyu Du, Yanping Zhang, Yin Li, and Zhu'an Cao
Appl. Environ. Microbiol. July 2007 73: 4515-4521; published ahead of print May 18, 2007, doi:10.1128/AEM.02857-06
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Transcriptome Analysis Reveals that Multidrug Efflux Genes Are Upregulated To Protect Pseudomonas aeruginosa from Pentachlorophenol Stress
Jocelyn Fraga Muller, Ann M. Stevens, Johanna Craig, and Nancy G. Love
Appl. Environ. Microbiol. July 2007 73: 4550-4558; published ahead of print May 25, 2007, doi:10.1128/AEM.00169-07
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Metabolic Characterization of Escherichia coli Strains Adapted to Growth on Lactate
Qiang Hua, Andrew R. Joyce, Bernhard Ø. Palsson, and Stephen S. Fong
Appl. Environ. Microbiol. July 2007 73: 4639-4647; published ahead of print May 18, 2007, doi:10.1128/AEM.00527-07
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Insertional Mutagenesis To Generate Lantibiotic Resistance in Lactococcus lactis
Caitriona M. Guinane, Paul D. Cotter, Elaine M. Lawton, Colin Hill, and R. Paul Ross
Appl. Environ. Microbiol. July 2007 73: 4677-4680; published ahead of print May 25, 2007, doi:10.1128/AEM.02351-06
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Molecular Characterization of hsp20, Encoding a Small Heat Shock Protein of Bifidobacterium breve UCC2003
Marco Ventura, Carlos Canchaya, Ziding Zhang, Gerald F. Fitzgerald, and Douwe van Sinderen
Appl. Environ. Microbiol. July 2007 73: 4695-4703; published ahead of print May 18, 2007, doi:10.1128/AEM.02496-06
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Methods:

SIMPLE Approach for Isolating Mutants Expressing Fimbriae
Sean-Paul Nuccio, Daniela Chessa, Eric H. Weening, Manuela Raffatellu, Steven Clegg, and Andreas J. Bäumler
Appl. Environ. Microbiol. July 2007 73: 4455-4462; published ahead of print May 25, 2007, doi:10.1128/AEM.00148-07
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Suitability of Flow Cytometry for Estimating Bacterial Biovolume in Natural Plankton Samples: Comparison with Microscopy Data
Marisol Felip, Stefan Andreatta, Ruben Sommaruga, Viera Straskrábová, and Jordi Catalan
Appl. Environ. Microbiol. July 2007 73: 4508-4514; published ahead of print May 18, 2007, doi:10.1128/AEM.00733-07
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Serial Analysis of rRNA Genes and the Unexpected Dominance of Rare Members of Microbial Communities
Matthew N. Ashby, Jasper Rine, Emmanuel F. Mongodin, Karen E. Nelson, and Dago Dimster-Denk
Appl. Environ. Microbiol. July 2007 73: 4532-4542; published ahead of print May 25, 2007, doi:10.1128/AEM.02956-06
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A General Framework for Designing and Validating Oligomer-Based DNA Microarrays and Its Application to Clostridium acetobutylicum
Carlos J. Paredes, Ryan S. Senger, Iwona S. Spath, Jacob R. Borden, Ryan Sillers, and Eleftherios T. Papoutsakis
Appl. Environ. Microbiol. July 2007 73: 4631-4638; published ahead of print May 25, 2007, doi:10.1128/AEM.00144-07
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Luciferase Detection during Stationary Phase in Lactococcus lactis
Herwig Bachmann, Filipe Santos, Michiel Kleerebezem, and Johan E. T. van Hylckama Vlieg
Appl. Environ. Microbiol. July 2007 73: 4704-4706; published ahead of print May 18, 2007, doi:10.1128/AEM.02807-06
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Food Microbiology:

Glutathione Reductase from Lactobacillus sanfranciscensis DSM20451^T: Contribution to Oxygen Tolerance and Thiol Exchange Reactions in Wheat Sourdoughs
André Jänsch, Maher Korakli, Rudi F. Vogel, and Michael G. Gänzle
Appl. Environ. Microbiol. July 2007 73: 4469-4476; published ahead of print May 11, 2007, doi:10.1128/AEM.02322-06
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Highly Efficient Gluten Degradation by Lactobacilli and Fungal Proteases during Food Processing: New Perspectives for Celiac Disease
Carlo G. Rizzello, Maria De Angelis, Raffaella Di Cagno, Alessandra Camarca, Marco Silano, Ilario Losito, Massimo De Vincenzi, Maria D. De Bari, Francesco Palmisano, Francesco Maurano, Carmen Gianfrani, and Marco Gobbetti
Appl. Environ. Microbiol. July 2007 73: 4499-4507; published ahead of print May 18, 2007, doi:10.1128/AEM.00260-07
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Mixed-Species Biofilm Formation by Lactic Acid Bacteria and Rice Wine Yeasts
Taketo Kawarai, Soichi Furukawa, Hirokazu Ogihara, and Makari Yamasaki
Appl. Environ. Microbiol. July 2007 73: 4673-4676; published ahead of print May 25, 2007, doi:10.1128/AEM.02891-06
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Mycology:

Cryptococcus neoformans Biofilm Formation Depends on Surface Support and Carbon Source and Reduces Fungal Cell Susceptibility to Heat, Cold, and UV Light
Luis R. Martinez and Arturo Casadevall
Appl. Environ. Microbiol. July 2007 73: 4592-4601; published ahead of print May 18, 2007, doi:10.1128/AEM.02506-06
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Mutational Analysis of Endoxylanases XylA and XylB from the Phytopathogen Fusarium graminearum Reveals Comprehensive Insights into Their Inhibitor Insensitivity
Tim Beliën, Steven Van Campenhout, Maarten Van Acker, Johan Robben, Christophe M. Courtin, Jan A. Delcour, and Guido Volckaert
Appl. Environ. Microbiol. July 2007 73: 4602-4608; published ahead of print May 18, 2007, doi:10.1128/AEM.00442-07
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Enzymology and Protein Engineering:

Casein Fermentate of Lactobacillus animalis DPC6134 Contains a Range of Novel Propeptide Angiotensin-Converting Enzyme Inhibitors
M. Hayes, C. Stanton, H. Slattery, O. O'Sullivan, C. Hill, G. F. Fitzgerald, and R. P. Ross
Appl. Environ. Microbiol. July 2007 73: 4658-4667; published ahead of print May 4, 2007, doi:10.1128/AEM.00096-07
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Alpha-Agarases Define a New Family of Glycoside Hydrolases, Distinct from Beta-Agarase Families
Didier Flament, Tristan Barbeyron, Murielle Jam, Philippe Potin, Mirjam Czjzek, Bernard Kloareg, and Gurvan Michel
Appl. Environ. Microbiol. July 2007 73: 4691-4694; published ahead of print May 18, 2007, doi:10.1128/AEM.00496-07
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Evolutionary and Genomic Microbiology:

Mobile Genetic Elements Provide Evidence for a Bovine Origin of Clonal Complex 17 of Streptococcus agalactiae
Geneviève Héry-Arnaud, Guillaume Bruant, Philippe Lanotte, Stella Brun, Bertrand Picard, Agnès Rosenau, Nathalie van der Mee-Marquet, Pascal Rainard, Roland Quentin, and Laurent Mereghetti
Appl. Environ. Microbiol. July 2007 73: 4668-4672; published ahead of print May 25, 2007, doi:10.1128/AEM.02604-06
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Plant Microbiology:

Monophyly of nodA and nifH Genes across Texan and Costa Rican Populations of Cupriavidus Nodule Symbionts
Cheryl P. Andam, Stephen J. Mondo, and Matthew A. Parker
Appl. Environ. Microbiol. July 2007 73: 4686-4690; published ahead of print May 25, 2007, doi:10.1128/AEM.00160-07
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To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.