AEM -- Table of Contents (January 1 2007, 73 [2])

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Contents: January 2007, Volume 73, Issue 2

       Physiology and Biotechnology

       Methods

       Biodegradation

       Microbial Ecology

       Genetics and Molecular Biology

       Public Health Microbiology

       Food Microbiology

       Mycology

       Invertebrate Microbiology

       Environmental Microbiology

       Errata

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Physiology and Biotechnology:

Autoinducer-2-Producing Protein LuxS, a Novel Salt- and Chloride-Induced Protein in the Moderately Halophilic Bacterium Halobacillus halophilus
Xaver Sewald, Stephan H. Saum, Peter Palm, Friedhelm Pfeiffer, Dieter Oesterhelt, and Volker Müller
Appl. Environ. Microbiol. January 2007 73: 371-379; published ahead of print November 3, 2006, doi:10.1128/AEM.01625-06
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Involvement of Pseudomonas aeruginosa Rhodanese in Protection from Cyanide Toxicity
Rita Cipollone, Emanuela Frangipani, Federica Tiburzi, Francesco Imperi, Paolo Ascenzi, and Paolo Visca
Appl. Environ. Microbiol. January 2007 73: 390-398; published ahead of print November 10, 2006, doi:10.1128/AEM.02143-06
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Molecular View by Fourier Transform Infrared Spectroscopy of the Relationship between Lactocin 705 and Membranes: Speculations on Antimicrobial Mechanism
Patricia Castellano, Graciela Vignolo, Ricardo Norberto Farías, José Luis Arrondo, and Rosana Chehín
Appl. Environ. Microbiol. January 2007 73: 415-420; published ahead of print October 27, 2006, doi:10.1128/AEM.01293-06
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Homolactate Fermentation by Metabolically Engineered Escherichia coli Strains
Y. Zhu, M. A. Eiteman, K. DeWitt, and E. Altman
Appl. Environ. Microbiol. January 2007 73: 456-464; published ahead of print November 22, 2006, doi:10.1128/AEM.02022-06
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Acid Tolerance of Streptococcus macedonicus as Assessed by Flow Cytometry and Single-Cell Sorting
Konstantinos Papadimitriou, Harris Pratsinis, Gerhard Nebe-von-Caron, Dimitris Kletsas, and Effie Tsakalidou
Appl. Environ. Microbiol. January 2007 73: 465-476; published ahead of print November 10, 2006, doi:10.1128/AEM.01244-06
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Transcriptional and Metabolic Responses of Bacillus subtilis to the Availability of Organic Acids: Transcription Regulation Is Important but Not Sufficient To Account for Metabolic Adaptation
Oliver Schilling, Oliver Frick, Christina Herzberg, Armin Ehrenreich, Elmar Heinzle, Christoph Wittmann, and Jörg Stülke
Appl. Environ. Microbiol. January 2007 73: 499-507; published ahead of print November 22, 2006, doi:10.1128/AEM.02084-06
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In Silico Model as a Tool for Interpretation of Intestinal Infection Studies
Peter de Jong, Marc M. M. Vissers, Roelof van der Meer, and Ingeborg M. J. Bovee-Oudenhoven
Appl. Environ. Microbiol. January 2007 73: 508-515; published ahead of print November 22, 2006, doi:10.1128/AEM.01299-06
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Synthesis of N-Acyl Homoserine Lactone Analogues Reveals Strong Activators of SdiA, the Salmonella enterica Serovar Typhimurium LuxR Homologue
Joost C. A. Janssens, Kristine Metzger, Ruth Daniels, Dave Ptacek, Tine Verhoeven, Lothar W. Habel, Jos Vanderleyden, Dirk E. De Vos, and Sigrid C. J. De Keersmaecker
Appl. Environ. Microbiol. January 2007 73: 535-544; published ahead of print November 3, 2006, doi:10.1128/AEM.01451-06
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Poly(3-Hydroxybutyrate) Granules at the Early Stages of Formation Are Localized Close to the Cytoplasmic Membrane in Caryophanon latum
Dieter Jendrossek, Olaf Selchow, and Michael Hoppert
Appl. Environ. Microbiol. January 2007 73: 586-593; published ahead of print November 3, 2006, doi:10.1128/AEM.01839-06
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Cross-Species GacA-Controlled Induction of Antibiosis in Pseudomonads
Christophe Dubuis and Dieter Haas
Appl. Environ. Microbiol. January 2007 73: 650-654; published ahead of print November 10, 2006, doi:10.1128/AEM.01681-06
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Methods:

Influence of Dangling Ends and Surface-Proximal Tails of Targets on Probe-Target Duplex Formation in 16S rRNA Gene-Based Diagnostic Arrays
Robert D. Stedtfeld, Lukas M. Wick, Samuel W. Baushke, Dieter M. Tourlousse, Amanda B. Herzog, Yongmei Xia, Jean Marie Rouillard, Joel A. Klappenbach, James R. Cole, Erdogan Gulari, James M. Tiedje, and Syed A. Hashsham
Appl. Environ. Microbiol. January 2007 73: 380-389; published ahead of print November 17, 2006, doi:10.1128/AEM.01785-06
[Abstract] [Full Text] [PDF] [Supplemental material] [Reprints and Permissions]

Microarray-Based Analysis of Microbial Community RNAs by Whole-Community RNA Amplification
Haichun Gao, Zamin K. Yang, Terry J. Gentry, Liyou Wu, Christopher W. Schadt, and Jizhong Zhou
Appl. Environ. Microbiol. January 2007 73: 563-571; published ahead of print November 10, 2006, doi:10.1128/AEM.01771-06
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Use of Quantum Dot Luminescent Probes To Achieve Single-Cell Resolution of Human Oral Bacteria in Biofilms
Natalia I. Chalmers, Robert J. Palmer, Jr., Laurence Du-Thumm, Richard Sullivan, Wenyuan Shi, and Paul E. Kolenbrander
Appl. Environ. Microbiol. January 2007 73: 630-636; published ahead of print November 17, 2006, doi:10.1128/AEM.02164-06
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Biodegradation:

Degradation and Mineralization of Nanomolar Concentrations of the Herbicide Dichlobenil and Its Persistent Metabolite 2,6-Dichlorobenzamide by Aminobacter spp. Isolated from Dichlobenil-Treated Soils
Sebastian R. Sørensen, Maria S. Holtze, Allan Simonsen, and Jens Aamand
Appl. Environ. Microbiol. January 2007 73: 399-406; published ahead of print November 17, 2006, doi:10.1128/AEM.01498-06
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Microbial Ecology:

Diversity of Archaea in Marine Sediments from Skan Bay, Alaska, Including Cultivated Methanogens, and Description of Methanogenium boonei sp. nov.
Melissa M. Kendall, George D. Wardlaw, Chin F. Tang, Adam S. Bonin, Yitai Liu, and David L. Valentine
Appl. Environ. Microbiol. January 2007 73: 407-414; published ahead of print November 22, 2006, doi:10.1128/AEM.01154-06
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Longitudinal Changes in the Bacterial Community Composition of the Danube River: a Whole-River Approach
Christian Winter, Thomas Hein, Gerhard Kavka, Robert L. Mach, and Andreas H. Farnleitner
Appl. Environ. Microbiol. January 2007 73: 421-431; published ahead of print November 3, 2006, doi:10.1128/AEM.01849-06
[Abstract] [Full Text] [PDF] [Supplemental material] [Reprints and Permissions]

Production of Antibacterial Compounds and Biofilm Formation by Roseobacter Species Are Influenced by Culture Conditions
Jesper Bartholin Bruhn, Lone Gram, and Robert Belas
Appl. Environ. Microbiol. January 2007 73: 442-450; published ahead of print November 10, 2006, doi:10.1128/AEM.02238-06
[Abstract] [Full Text] [PDF] [Supplemental material] [Reprints and Permissions]

Sulfur-Oxidizing Bacteria in Soap Lake (Washington State), a Meromictic, Haloalkaline Lake with an Unprecedented High Sulfide Content
Dimitry Y. Sorokin, Mirjam Foti, Holly C. Pinkart, and Gerard Muyzer
Appl. Environ. Microbiol. January 2007 73: 451-455; published ahead of print November 17, 2006, doi:10.1128/AEM.02087-06
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Community Structure of Ammonia-Oxidizing Bacteria under Long-Term Application of Mineral Fertilizer and Organic Manure in a Sandy Loam Soil
Haiyan Chu, Takeshi Fujii, Sho Morimoto, Xiangui Lin, Kazuyuki Yagi, Junli Hu, and Jiabao Zhang
Appl. Environ. Microbiol. January 2007 73: 485-491; published ahead of print November 10, 2006, doi:10.1128/AEM.01536-06
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Genes That Enhance the Ecological Fitness of Shewanella oneidensis MR-1 in Sediments Reveal the Value of Antibiotic Resistance
Jennifer L. Groh, Qingwei Luo, Jimmy D. Ballard, and Lee R. Krumholz
Appl. Environ. Microbiol. January 2007 73: 492-498; published ahead of print November 17, 2006, doi:10.1128/AEM.01086-06
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Molecular Dynamics of Emiliania huxleyi and Cooccurring Viruses during Two Separate Mesocosm Studies
Joaquín Martínez Martínez, Declan C. Schroeder, Aud Larsen, Gunnar Bratbak, and William H. Wilson
Appl. Environ. Microbiol. January 2007 73: 554-562; published ahead of print November 10, 2006, doi:10.1128/AEM.00864-06
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Analysis of Diversity and Activity of Sulfate-Reducing Bacterial Communities in Sulfidogenic Bioreactors Using 16S rRNA and dsrB Genes as Molecular Markers
Shabir A. Dar, Li Yao, Udo van Dongen, J. Gijs Kuenen, and Gerard Muyzer
Appl. Environ. Microbiol. January 2007 73: 594-604; published ahead of print November 10, 2006, doi:10.1128/AEM.01875-06
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Vulnerability of Pathogenic Biofilms to Micavibrio aeruginosavorus
Daniel Kadouri, Nel C. Venzon, and George A. O'Toole
Appl. Environ. Microbiol. January 2007 73: 605-614; published ahead of print November 10, 2006, doi:10.1128/AEM.01893-06
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Comparison of Primer Sets for Use in Automated Ribosomal Intergenic Spacer Analysis of Aquatic Bacterial Communities: an Ecological Perspective
Stuart E. Jones, Ashley L. Shade, Katherine D. McMahon, and Angela D. Kent
Appl. Environ. Microbiol. January 2007 73: 659-662; published ahead of print November 22, 2006, doi:10.1128/AEM.02130-06
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Genetics and Molecular Biology:

Titration and Conditional Knockdown of the prfB Gene in Escherichia coli: Effects on Growth and Overproduction of the Recombinant Mammalian Selenoprotein Thioredoxin Reductase
Olle Rengby and Elias S. J. Arnér
Appl. Environ. Microbiol. January 2007 73: 432-441; published ahead of print November 3, 2006, doi:10.1128/AEM.02019-06
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Identification and Characterization of a Fructose Phosphotransferase System in Bifidobacterium breve UCC2003
Alain Mazé, Mary O'Connell-Motherway, Gerald F. Fitzgerald, Josef Deutscher, and Douwe van Sinderen
Appl. Environ. Microbiol. January 2007 73: 545-553; published ahead of print November 10, 2006, doi:10.1128/AEM.01496-06
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Green Tea Polyphenols Function as Prooxidants To Activate Oxidative-Stress-Responsive Transcription Factors in Yeasts
Kazuhiro Maeta, Wataru Nomura, Yoshifumi Takatsume, Shingo Izawa, and Yoshiharu Inoue
Appl. Environ. Microbiol. January 2007 73: 572-580; published ahead of print November 22, 2006, doi:10.1128/AEM.01963-06
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Public Health Microbiology:

Occurrence of Virulence and Antimicrobial Resistance Genes in Escherichia coli Isolates from Different Aquatic Ecosystems within the St. Clair River and Detroit River Areas
Katia Hamelin, Guillaume Bruant, Abdel El-Shaarawi, Stephen Hill, Thomas A. Edge, John Fairbrother, Josée Harel, Christine Maynard, Luke Masson, and Roland Brousseau
Appl. Environ. Microbiol. January 2007 73: 477-484; published ahead of print November 3, 2006, doi:10.1128/AEM.01445-06
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Molecular Analysis of the Subgingival Microbiota in Health and Disease
Ruth G. Ledder, Peter Gilbert, Sharon A. Huws, Leon Aarons, Martin P. Ashley, Peter S. Hull, and Andrew J. McBain
Appl. Environ. Microbiol. January 2007 73: 516-523; published ahead of print November 3, 2006, doi:10.1128/AEM.01419-06
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Functional Analysis of Burkholderia cepacia Genes bceD and bceF, Encoding a Phosphotyrosine Phosphatase and a Tyrosine Autokinase, Respectively: Role in Exopolysaccharide Biosynthesis and Biofilm Formation
Ana S. Ferreira, Jorge H. Leitão, Sílvia A. Sousa, Ana M. Cosme, Isabel Sá-Correia, and Leonilde M. Moreira
Appl. Environ. Microbiol. January 2007 73: 524-534; published ahead of print November 17, 2006, doi:10.1128/AEM.01450-06
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Food Microbiology:

Inactivation of a Norovirus by High-Pressure Processing
David H. Kingsley, Daniel R. Holliman, Kevin R. Calci, Haiqiang Chen, and George J. Flick
Appl. Environ. Microbiol. January 2007 73: 581-585; published ahead of print December 1, 2006, doi:10.1128/AEM.02117-06
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Mycology:

Cryptococcus neoformans Can Utilize the Bacterial Melanin Precursor Homogentisic Acid for Fungal Melanogenesis
Susana Frases, Angela Salazar, Ekaterina Dadachova, and Arturo Casadevall
Appl. Environ. Microbiol. January 2007 73: 615-621; published ahead of print November 10, 2006, doi:10.1128/AEM.01947-06
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Role of Zearalenone Lactonase in Protection of Gliocladium roseum from Fungitoxic Effects of the Mycotoxin Zearalenone
Jan Utermark and Petr Karlovsky
Appl. Environ. Microbiol. January 2007 73: 637-642; published ahead of print November 17, 2006, doi:10.1128/AEM.01440-06
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Invertebrate Microbiology:

Vertical Transmission of Diverse Microbes in the Tropical Sponge Corticium sp.
Koty H. Sharp, Boreth Eam, D. John Faulkner, and Margo G. Haygood
Appl. Environ. Microbiol. January 2007 73: 622-629; published ahead of print November 22, 2006, doi:10.1128/AEM.01493-06
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Novel Role for Aeromonas jandaei as a Digestive Tract Symbiont of the North American Medicinal Leech
Mark E. Siddall, Paul L. Worthen, Matthew Johnson, and Joerg Graf
Appl. Environ. Microbiol. January 2007 73: 655-658; published ahead of print November 17, 2006, doi:10.1128/AEM.01282-06
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Environmental Microbiology:

Use of Tetrahymena thermophila To Study the Role of Protozoa in Inactivation of Viruses in Water
Marcel D. O. Pinheiro, Mary E. Power, Barbara J. Butler, Vivian R. Dayeh, Robin Slawson, Lucy E. J. Lee, Denis H. Lynn, and Niels C. Bols
Appl. Environ. Microbiol. January 2007 73: 643-649; published ahead of print November 17, 2006, doi:10.1128/AEM.02363-06
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Errata:

Virus-Bacterium Interactions in Water and Sediment of West African Inland Aquatic Systems
Yvan Bettarel, Marc Bouvy, Claire Dumont, and Télesphore Sime-Ngando
Appl. Environ. Microbiol. January 2007 73: 663
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To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.