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Table of Contents

February 1, 2003; Volume 69,Issue 2

Genetics and Molecular Biology

  • Genetics and Molecular Biology
    Isolation and Molecular Characterization of pMG160, a Mobilizable Cryptic Plasmid from Rhodobacter blasticus
    Masayuki Inui, Kaori Nakata, Jung Hyeob Roh, Alain A. Vertès, Hideaki Yukawa
  • Genetics and Molecular Biology
    Identification of a High-Affinity Phosphate Transporter Gene in a Prasinophyte Alga, Tetraselmis chui, and Its Expression under Nutrient Limitation
    Chih-Ching Chung, Sheng-Ping L. Hwang, Jeng Chang
  • Genetics and Molecular Biology
    Characterization of a New Operon, as-48EFGH, from the as-48 Gene Cluster Involved in Immunity to Enterocin AS-48
    Marta Diaz, Eva Valdivia, Manuel Martínez-Bueno, Matilde Fernández, Andrés Santos Soler-González, Hilario Ramírez-Rodrigo, Mercedes Maqueda
  • Genetics and Molecular Biology
    Cloning and Analysis of a DNA Fragment Stimulating Avermectin Production in Various Streptomyces avermitilis Strains
    Yong-Soon Hwang, Eung-Soo Kim, Sándor Biró, Cha-Yong Choi
  • Genetics and Molecular Biology
    Cloning and Expression Analysis of the pcbAB-pcbC β-Lactam Genes in the Marine Fungus Kallichroma tethys
    Chi-fai Kim, Simon K. Y. Lee, Jackie Price, Ralph W. Jack, Geoffrey Turner, Richard Y. C. Kong

Food Microbiology

  • Food Microbiology
    Cooperation between Lactococcus lactis and Nonstarter Lactobacilli in the Formation of Cheese Aroma from Amino Acids
    Agnieszka Kieronczyk, Siv Skeie, Thor Langsrud, Mireille Yvon
  • Food Microbiology
    Computer Simulation of Clostridium botulinum Strain 56A Behavior at Low Spore Concentrations
    L. Zhao, T. J. Montville, D. W. Schaffner
  • Food Microbiology
    Heat and Osmotic Stress Responses of Probiotic Lactobacillus rhamnosus HN001 (DR20) in Relation to Viability after Drying
    Jaya Prasad, Paul McJarrow, Pramod Gopal
  • Food Microbiology
    In Situ Production of Exopolysaccharides during Sourdough Fermentation by Cereal and Intestinal Isolates of Lactic Acid Bacteria
    Markus Tieking, Maher Korakli, Matthias A. Ehrmann, Michael G. Gänzle, Rudi F. Vogel
  • Food Microbiology
    Three Transporters Mediate Uptake of Glycine Betaine and Carnitine by Listeria monocytogenes in Response to Hyperosmotic Stress
    Apostolos S. Angelidis, Gary M. Smith
  • Food Microbiology
    Detection of Listeria monocytogenes from a Model Food by Fluorescence Resonance Energy Transfer-Based PCR with an Asymmetric Fluorogenic Probe Set
    Kai Koo, Lee-Ann Jaykus
  • Food Microbiology
    Genetic Manipulation of Lactococcus lactis by Using Targeted Group II Introns: Generation of Stable Insertions without Selection
    Courtney L. Frazier, Joseph San Filippo, Alan M. Lambowitz, David A. Mills
  • Food Microbiology
    Monitoring the Production of Aflatoxin B1 in Wheat by Measuring the Concentration of nor-1 mRNA
    Zsuzsanna Mayer, Paul Färber, Rolf Geisen
  • Food Microbiology
    Molecular Characterization of tet(M) Genes in Lactobacillus Isolates from Different Types of Fermented Dry Sausage
    Dirk Gevers, Morten Danielsen, Geert Huys, Jean Swings
  • Food Microbiology
    Identification and Characterization of Lactobacillus helveticus PepO2, an Endopeptidase with Post-Proline Specificity
    Yo-Shen Chen, Jeffrey E. Christensen, Jeffery R. Broadbent, James L. Steele
  • Food Microbiology
    Hydrolysis of Casein-Derived Peptides αS1-Casein(f1-9) and β-Casein(f193-209) by Lactobacillus helveticus Peptidase Deletion Mutants Indicates the Presence of a Previously Undetected Endopeptidase
    Jeffrey E. Christensen, Jeffery R. Broadbent, James L. Steele
  • Food Microbiology
    Studies on the Mode of Action of Reutericyclin
    Michael G. Gänzle, Rudi F. Vogel

Physiology and Biotechnology

  • PHYSIOLOGY AND BIOTECHNOLOGY
    Molecular Analysis of a Saccharomyces cerevisiae Mutant with Improved Ability To Utilize Xylose Shows Enhanced Expression of Proteins Involved in Transport, Initial Xylose Metabolism, and the Pentose Phosphate Pathway
    C. Fredrik Wahlbom, Ricardo R. Cordero Otero, Willem H. van Zyl, Bärbel Hahn-Hägerdal, Leif J. Jönsson
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Anaerobic Degradation of Ethylbenzene by a New Type of Marine Sulfate-Reducing Bacterium
    Olaf Kniemeyer, Thomas Fischer, Heinz Wilkes, Frank Oliver Glöckner, Friedrich Widdel
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Integrative Transformation System for the Metabolic Engineering of the Sphingoid Base-Producing Yeast Pichia ciferrii
    Jung-Hoon Bae, Jung-Hoon Sohn, Chang-Seo Park, Joon-Shick Rhee, Eui-Sung Choi
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Production by Clostridium acetobutylicum ATCC 824 of CelG, a Cellulosomal Glycoside Hydrolase Belonging to Family 9
    Ana M. López-Contreras, Aernout A. Martens, Nora Szijarto, Hans Mooibroek, Pieternel A. M. Claassen, John van der Oost, Willem M. de Vos
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Characterization of Chitinase Genes from an Alkaliphilic Actinomycete, Nocardiopsis prasina OPC-131
    Hiroshi Tsujibo, Takahiro Kubota, Mitsugu Yamamoto, Katsushiro Miyamoto, Yoshihiko Inamori
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Production of a Doubly Chiral Compound, (4R,6R)-4-Hydroxy-2,2,6-Trimethylcyclohexanone, by Two-Step Enzymatic Asymmetric Reduction
    Masaru Wada, Ayumi Yoshizumi, Yumiko Noda, Michihiko Kataoka, Sakayu Shimizu, Hiroshi Takagi, Shigeru Nakamori
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Characterization of a Thermostable d-Stereospecific Alanine Amidase from Brevibacillus borstelensis BCS-1
    Dae Heoun Baek, Seok-Joon Kwon, Seung-Pyo Hong, Mi-Sun Kwak, Mi-Hwa Lee, Jae Jun Song, Seung-Goo Lee, Ki-Hong Yoon, Moon-Hee Sung
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Engineering of Carbon Distribution between Glycolysis and Sugar Nucleotide Biosynthesis in Lactococcus lactis
    Ingeborg C. Boels, Michiel Kleerebezem, Willem M. de Vos
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Impaired Temperature Stress Response of a Streptococcus thermophilus deoD Mutant
    Mario Varcamonti, Maria R. Graziano, Romilde Pezzopane, Gino Naclerio, Slavica Arsenijevic, Maurilio De Felice
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Enhanced Production of Recombinant Proteins in Escherichia coli by Filamentation Suppression
    Ki Jun Jeong, Sang Yup Lee

Public Health Microbiology

  • Public Health Microbiology
    Molecular Characterization of Astroviruses by Reverse Transcriptase PCR and Sequence Analysis: Comparison of Clinical and Environmental Isolates from South Africa
    S. Nadan, J. E. Walter, W. O. K. Grabow, D. K. Mitchell, M. B. Taylor
  • Public Health Microbiology
    A Sensitive and Inexpensive Yeast Bioassay for the Mycotoxin Zearalenone and Other Compounds with Estrogenic Activity
    Rudolf Mitterbauer, Hanna Weindorfer, Naser Safaie, Rudolf Krska, Marc Lemmens, Peter Ruckenbauer, Karl Kuchler, Gerhard Adam
  • Public Health Microbiology
    Evaluation of Broiler Litter with Reference to the Microbial Composition as Assessed by Using 16S rRNA and Functional Gene Markers
    Jingrang Lu, Susan Sanchez, Charles Hofacre, John J. Maurer, Barry G. Harmon, Margie D. Lee
  • Public Health Microbiology
    Comparison of Method 1623 and Cell Culture-PCR for Detection of Cryptosporidium spp. in Source Waters
    Mark W. LeChevallier, George D. Di Giovanni, Jennifer L. Clancy, Zia Bukhari, Shan Bukhari, Jeffrey S. Rosen, Jose Sobrinho, Michelle M. Frey
  • Public Health Microbiology
    Comparison of Shiga Toxin Production by Hemolytic-Uremic Syndrome-Associated and Bovine-Associated Shiga Toxin-Producing Escherichia coli Isolates
    Jenny M. Ritchie, Patrick L. Wagner, David W. K. Acheson, Matthew K. Waldor
  • Public Health Microbiology
    Molecular Analyses of Salmonellaenterica Isolates from Fish Feed Factories and Fish Feed Ingredients
    Live L. Nesse, Kerstin Nordby, Even Heir, Bjarne Bergsjoe, Traute Vardund, Halvor Nygaard, Gudmund Holstad
  • Public Health Microbiology
    Geographical Variation in Ribotype Profiles of Escherichia coli Isolates from Humans, Swine, Poultry, Beef, and Dairy Cattle in Florida
    Troy M. Scott, Salina Parveen, Kenneth M. Portier, Joan B. Rose, Mark L. Tamplin, Samuel R. Farrah, Andrew Koo, Jerzy Lukasik
  • Public Health Microbiology
    Small, Acid-Soluble Proteins as Biomarkers in Mass Spectrometry Analysis of Bacillus Spores
    Yetrib Hathout, Barbara Setlow, Rosa-Martha Cabrera-Martinez, Catherine Fenselau, Peter Setlow
  • Public Health Microbiology
    Incidence of Enteric Viruses in Groundwater from Household Wells in Wisconsin
    Mark A. Borchardt, Phil D. Bertz, Susan K. Spencer, David A. Battigelli
  • Public Health Microbiology
    Chlorine Inactivation of Spores of Encephalitozoon spp
    C. H. Johnson, M. M. Marshall, L. A. DeMaria, J. M. Moffet, D. G. Korich
  • Public Health Microbiology
    UV Resistance of Bacillus anthracis Spores Revisited: Validation of Bacillus subtilis Spores as UV Surrogates for Spores of B. anthracis Sterne
    Wayne L. Nicholson, Belinda Galeano

Methods

  • Methods
    Monitoring Gene Expression in Mixed Microbial Communities by Using DNA Microarrays
    Philip Dennis, Elizabeth A. Edwards, Steven N. Liss, Roberta Fulthorpe
  • Methods
    Bacteriocin Detection from Whole Bacteria by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry
    Thomas Hindré, Sandrine Didelot, Jean-Paul Le Pennec, Dominique Haras, Alain Dufour, Karine Vallée-Réhel
  • Methods
    A Combined Model To Predict the Functionality of the Bacteriocin-Producing Lactobacillus sakei Strain CTC 494
    Frédéric Leroy, Luc De Vuyst
  • Methods
    Specific Detection of Arcobacter and Campylobacter Strains in Water and Sewage by PCR and Fluorescent In Situ Hybridization
    Yolanda Moreno, Salut Botella, José Luis Alonso, María A. Ferrús, Manuel Hernández, Javier Hernández
  • Methods
    Use of a Promoter Trap To Identify Bacillus cereus Genes Regulated by Tomato Seed Exudate and a Rhizosphere Resident, Pseudomonas aureofaciens
    Anne K. Dunn, Amy K. Klimowicz, Jo Handelsman
  • Methods
    Development of Sinorhizobium meliloti Pilot Macroarrays for Transcriptome Analysis
    Hélène Bergès, Emmanuelle Lauber, Carine Liebe, Jacques Batut, Daniel Kahn, Frans J. de Bruijn, Frédéric Ampe
  • Methods
    Application of New Primer-Enzyme Combinations to Terminal Restriction Fragment Length Polymorphism Profiling of Bacterial Populations in Human Feces
    Koji Nagashima, Takayoshi Hisada, Maremi Sato, Jun Mochizuki

Microbial Ecology

  • Microbial Ecology
    Hydrogen-Dependent Oxygen Reduction by Homoacetogenic Bacteria Isolated from Termite Guts
    Hamadi I. Boga, Andreas Brune
  • Microbial Ecology
    The Abundance of Microcystin-Producing Genotypes Correlates Positively with Colony Size in Microcystis sp. and Determines Its Microcystin Net Production in Lake Wannsee
    Rainer Kurmayer, Guntram Christiansen, Ingrid Chorus
  • Microbial Ecology
    Microbial Community Composition Affects Soil Fungistasis
    Wietse de Boer, Patrick Verheggen, Paulien J. A. Klein Gunnewiek, George A. Kowalchuk, Johannes A. van Veen
  • Microbial Ecology
    Bacterial Population Changes in a Membrane Bioreactor for Graywater Treatment Monitored by Denaturing Gradient Gel Electrophoretic Analysis of 16S rRNA Gene Fragments
    David M. Stamper, Marianne Walch, Rachel N. Jacobs
  • Microbial Ecology
    Terminal Restriction Fragment Length Polymorphism Data Analysis for Quantitative Comparison of Microbial Communities
    Christopher B. Blackwood, Terry Marsh, Sang-Hoon Kim, Eldor A. Paul
  • Microbial Ecology
    Phylogenetic Diversity of Nitrogenase (nifH) Genes in Deep-Sea and Hydrothermal Vent Environments of the Juan de Fuca Ridge
    Mausmi P. Mehta, David A. Butterfield, John A. Baross
  • Microbial Ecology
    Depth Distribution of Microbial Diversity in Mono Lake, a Meromictic Soda Lake in California
    Shaheen B. Humayoun, Nasreen Bano, James T. Hollibaugh
  • Microbial Ecology
    Effects of Alternative Dietary Substrates on Competition between Human Colonic Bacteria in an Anaerobic Fermentor System
    Sylvia H. Duncan, Karen P. Scott, Alan G. Ramsay, Hermie J. M. Harmsen, Gjalt W. Welling, Colin S. Stewart, Harry J. Flint
  • Microbial Ecology
    Oligonucleotide Microarray for the Study of Functional Gene Diversity in the Nitrogen Cycle in the Environment
    Gaspar Taroncher-Oldenburg, Erin M. Griner, Chris A. Francis, Bess B. Ward
  • Microbial Ecology
    High Rate of Uptake of Organic Nitrogen Compounds by Prochlorococcus Cyanobacteria as a Key to Their Dominance in Oligotrophic Oceanic Waters
    Mikhail V. Zubkov, Bernhard M. Fuchs, Glen A. Tarran, Peter H. Burkill, Rudolf Amann

Environmental Microbiology and Biodegradation

  • ENVIRONMENTAL MICROBIOLOGY AND BIODEGRADATION
    Characterization of the Initial Reactions during the Cometabolic Oxidation of Methyl tert-Butyl Ether by Propane-Grown Mycobacterium vaccae JOB5
    Christy A. Smith, Kirk T. O'Reilly, Michael R. Hyman
  • ENVIRONMENTAL MICROBIOLOGY AND BIODEGRADATION
    In-Field Spatial Variability in the Degradation of the Phenyl-Urea Herbicide Isoproturon Is the Result of Interactions between Degradative Sphingomonas spp. and Soil pH
    Gary D. Bending, Suzanne D. Lincoln, Sebastian R. Sørensen, J. Alun W. Morgan, Jens Aamand, Allan Walker
  • ENVIRONMENTAL MICROBIOLOGY AND BIODEGRADATION
    Tin-Carbon Cleavage of Organotin Compounds by Pyoverdine from Pseudomonas chlororaphis
    Hiroyuki Inoue, Osamu Takimura, Ken Kawaguchi, Teruhiko Nitoda, Hiroyuki Fuse, Katsuji Murakami, Yukiho Yamaoka
  • ENVIRONMENTAL MICROBIOLOGY AND BIODEGRADATION
    Arthrobacter Strain VAI-A Utilizes Acyl-Homoserine Lactone Inactivation Products and Stimulates Quorum Signal Biodegradation by Variovorax paradoxus
    Suvi Flagan, Weng-Ki Ching, Jared R. Leadbetter
  • ENVIRONMENTAL MICROBIOLOGY AND BIODEGRADATION
    Desulfonation and Degradation of the Disulfodiphenylethercarboxylates from Linear Alkyldiphenyletherdisulfonate Surfactants
    David Schleheck, Melanie Lechner, René Schönenberger, Marc J.-F. Suter, Alasdair M. Cook
  • ENVIRONMENTAL MICROBIOLOGY AND BIODEGRADATION
    Growth of a Dehalococcoides-Like Microorganism on Vinyl Chloride and cis-Dichloroethene as Electron Acceptors as Determined by Competitive PCR
    Alison M. Cupples, Alfred M. Spormann, Perry L. McCarty
  • ENVIRONMENTAL MICROBIOLOGY AND BIODEGRADATION
    Complete Detoxification of Vinyl Chloride by an Anaerobic Enrichment Culture and Identification of the Reductively Dechlorinating Population as a Dehalococcoides Species
    Jianzhong He, Kirsti M. Ritalahti, Michael R. Aiello, Frank E. Löffler

Invertebrate Microbiology

  • Invertebrate Microbiology
    Contribution of pilA to Competitive Colonization of the Squid Euprymna scolopes by Vibrio fischeri
    Eric V. Stabb, Edward G. Ruby
  • Invertebrate Microbiology
    Cloning, Sequencing, and Expression of the Chitinase Gene chiA74 from Bacillus thuringiensis
    J. Eleazar Barboza-Corona, Elizabeth Nieto-Mazzocco, Rocio Velázquez-Robledo, Rubén Salcedo-Hernandez, Mayela Bautista, Beatriz Jiménez, Jorge E. Ibarra
  • Invertebrate Microbiology
    Recombinant Strain of Bacillus thuringiensis Producing Cyt1A, Cry11B, and the Bacillus sphaericus Binary Toxin
    Hyun-Woo Park, Dennis K. Bideshi, Brian A. Federici

Plant Microbiology

  • Plant Microbiology
    Production of Cyclic Lipopeptides by Pseudomonas fluorescens Strains in Bulk Soil and in the Sugar Beet Rhizosphere
    Tommy Harder Nielsen, Jan Sørensen
  • Plant Microbiology
    Rhizobium etli and Rhizobium gallicum Nodulate Common Bean (Phaseolus vulgaris) in a Traditionally Managed Milpa Plot in Mexico: Population Genetics and Biogeographic Implications
    Claudia Silva, Pablo Vinuesa, Luis E. Eguiarte, Esperanza Martínez-Romero, Valeria Souza
  • Plant Microbiology
    Comparative Genetic Diversity of the narG, nosZ, and 16S rRNA Genes in Fluorescent Pseudomonads
    Sandrine Delorme, Laurent Philippot, Veronique Edel-Hermann, Chrystel Deulvot, Christophe Mougel, Philippe Lemanceau
  • Plant Microbiology
    Symbiotic and Genetic Diversity of Rhizobium galegae Isolates Collected from the Galega orientalis Gene Center in the Caucasus
    E. E. Andronov, Z. Terefework, M. L. Roumiantseva, N. I. Dzyubenko, O. P. Onichtchouk, O. N. Kurchak, A. Dresler-Nurmi, J. P. W. Young, B. V. Simarov, K. Lindström
  • Plant Microbiology
    Differential Inactivation of Seed Exudate Stimulation of Pythium ultimum Sporangium Germination by Enterobacter cloacae Influences Biological Control Efficacy on Different Plant Species
    Koji Kageyama, Eric B. Nelson
  • Plant Microbiology
    High-Performance Liquid Chromatography Analyses of Pyoverdin Siderophores Differentiate among Phytopathogenic Fluorescent Pseudomonas Species
    Alain Bultreys, Isabelle Gheysen, Bernard Wathelet, Henri Maraite, Edmond de Hoffmann
  • Plant Microbiology
    Biotin Limitation in Sinorhizobium meliloti Strain 1021 Alters Transcription and Translation
    Elke B. Heinz, Wolfgang R. Streit
  • Plant Microbiology
    Differences between Pseudomonas syringae pv. syringae B728a and Pantoea agglomerans BRT98 in Epiphytic and Endophytic Colonization of Leaves
    Siva Sabaratnam, Gwyn A. Beattie
  • Plant Microbiology
    Enhancement of Population Size of a Biological Control Agent and Efficacy in Control of Bacterial Speck of Tomato through Salicylate and Ammonium Sulfate Amendments
    Pingsheng Ji, Mark Wilson
  • Plant Microbiology
    Genetic Differences between Two Strains of Xylella fastidiosa Revealed by Suppression Subtractive Hybridization
    Ricardo Harakava, Dean W. Gabriel

Enzymology and Protein Engineering

  • Enzymology and Protein Engineering
    Functional Expression of a Fungal Laccase in Saccharomyces cerevisiae by Directed Evolution
    Thomas Bulter, Miguel Alcalde, Volker Sieber, Peter Meinhold, Christian Schlachtbauer, Frances H. Arnold
  • Enzymology and Protein Engineering
    A Single Mutation in the Activation Site of Bovine Trypsinogen Enhances Its Accumulation in the Fermentation Broth of the Yeast Pichia pastoris
    José Hanquier, Yannick Sorlet, Dominique Desplancq, Laurence Baroche, Marc Ebtinger, Jean-François Lefèvre, Franc Pattus, Charles L. Hershberger, Alain A. Vertès
  • Enzymology and Protein Engineering
    Improvement of Posttranslational Bottlenecks in the Production of Penicillin Amidase in Recombinant Escherichiacoli Strains
    Z. Ignatova, A. Mahsunah, M. Georgieva, V. Kasche

Mycology

  • Mycology
    Seasonal Changes in Fungal Production and Biomass on Standing Dead Scirpuslacustris Litter in a Northern Prairie Wetland
    Brij Verma, Richard D. Robarts, John V. Headley
  • Mycology
    Involvement of Calcium/Calmodulin Signaling in Cercosporin Toxin Biosynthesis by Cercosporanicotianae
    Kuang-Ren Chung
  • Mycology
    Aminopeptidase C of Aspergillus niger Is a Novel Phenylalanine Aminopeptidase
    Daniëlle E. J. W. Basten, Peter J. T. Dekker, Peter J. Schaap
  • Mycology
    Dibenzyl Sulfide Metabolism by White Rot Fungi
    Jonathan D. Van Hamme, Eddie T. Wong, Heather Dettman, Murray R. Gray, Michael A. Pickard

Author's Correction

  • Author's Correction
    Effects of the 20-Kilodalton Helper Protein on Cry1Ac Production and Spore Formation in Bacillus thuringiensis
    Zongze Shao, Ziduo Liu, Ziniu Yu
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volume 69, issue 2
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