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Applied and Environmental Microbiology
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Table of Contents

April 2006; Volume 72,Issue 4

Guest Commentary

  • GUEST COMMENTARY
    Quorum Sensing on a Global Scale: Massive Numbers of Bioluminescent Bacteria Make Milky Seas
    Kenneth H. Nealson, J. Woodland Hastings

Evolutionary and Genomic Microbiology

  • Evolutionary and Genomic Microbiology
    The Phosphopantetheinyl Transferase Superfamily: Phylogenetic Analysis and Functional Implications in Cyanobacteria
    J. N. Copp, B. A. Neilan
  • Evolutionary and Genomic Microbiology
    Emergence of Distinct Genotypes of Cryptosporidium parvum in Structured Host Populations
    Sultan Tanriverdi, Alex Markovics, M. Özkan Arslan, Aysel Itik, Varda Shkap, Giovanni Widmer
  • Evolutionary and Genomic Microbiology
    Molecular Population Genetics and Phenotypic Diversification of Two Populations of the Thermophilic Cyanobacterium Mastigocladus laminosus
    Scott R. Miller, Michael D. Purugganan, Stephanie E. Curtis

Physiology and Biotechnology

  • PHYSIOLOGY AND BIOTECHNOLOGY
    Inhibition of Epsilon-Poly-l-Lysine Biosynthesis in Streptomycetaceae Bacteria by Short-Chain Polyols
    Masanobu Nishikawa, Ken'ichi Ogawa
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Deletion of BCY1 from the Saccharomyces cerevisiae Genome Is Semidominant and Induces Autolytic Phenotypes Suitable for Improvement of Sparkling Wines
    Laura Tabera, Rosario Muñoz, Ramon Gonzalez
  • PHYSIOLOGY AND BIOTECHNOLOGY
    YliH (BssR) and YceP (BssS) Regulate Escherichia coli K-12 Biofilm Formation by Influencing Cell Signaling
    Joanna Domka, Jintae Lee, Thomas K. Wood
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Engineered Biosynthesis of a Novel Amidated Polyketide, Using the Malonamyl-Specific Initiation Module from the Oxytetracycline Polyketide Synthase
    Wenjun Zhang, Brian D. Ames, Shiou-Chuan Tsai, Yi Tang
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Poly(3-Hydroxybutyrate) Synthesis by Recombinant Escherichia coli arcA Mutants in Microaerobiosis
    Pablo I. Nikel, M. Julia Pettinari, Miguel A. Galvagno, Beatriz S. Méndez
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Very Low Ethanol Concentrations Affect the Viability and Growth Recovery in Post-Stationary-Phase Staphylococcus aureus Populations
    Indranil Chatterjee, Greg A. Somerville, Christine Heilmann, Hans-Georg Sahl, Hans H. Maurer, Mathias Herrmann
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Assessment of the Roles of LuxS, S-Ribosyl Homocysteine, and Autoinducer 2 in Cell Attachment during Biofilm Formation by Listeria monocytogenes EGD-e
    Sylvain Challan Belval, Laurent Gal, Sylvain Margiewes, Dominique Garmyn, Pascal Piveteau, Jean Guzzo
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Effects of Preculturing Conditions on Lag Time and Specific Growth Rate of Enterobacter sakazakii in Reconstituted Powdered Infant Formula
    M. C. Kandhai, M. W. Reij, C. Grognou, M. van Schothorst, L. G. M. Gorris, M. H. Zwietering
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Peptidoglycan Hydrolase Fusions Maintain Their Parental Specificities
    David M. Donovan, Shengli Dong, Wes Garrett, Geneviève M. Rousseau, Sylvain Moineau, David G. Pritchard
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Elevated Shear Stress Protects Escherichia coli Cells Adhering to Surfaces via Catch Bonds from Detachment by Soluble Inhibitors
    Lina M. Nilsson, Wendy E. Thomas, Evgeni V. Sokurenko, Viola Vogel
  • PHYSIOLOGY AND BIOTECHNOLOGY
    PslD Is a Secreted Protein Required for Biofilm Formation by Pseudomonas aeruginosa
    Andrea Campisano, Christine Schroeder, Mirle Schemionek, Joerg Overhage, Bernd H. A. Rehm

Food Microbiology

  • Food Microbiology
    Construction and Analysis of Fractional Multifactorial Designs To Study Attachment Strength and Transfer of Listeria monocytogenes from Pure or Mixed Biofilms after Contact with a Solid Model Food
    Graziella Midelet, André Kobilinsky, Brigitte Carpentier
  • Food Microbiology
    Quantitative Real-Time PCR Analysis of Fecal Lactobacillus Species in Infants Receiving a Prebiotic Infant Formula
    Monique Haarman, Jan Knol
  • Food Microbiology
    Indirect Measurement of the Lag Time Distribution of Single Cells of Listeria innocua in Food
    M. D'Arrigo, G. D. García de Fernando, R. Velasco de Diego, J. A. Ordóñez, S. M. George, C. Pin
  • Food Microbiology
    Cloning and Sequencing of the ompA Gene of Enterobacter sakazakii and Development of an ompA-Targeted PCR for Rapid Detection of Enterobacter sakazakii in Infant Formula
    Manoj Kumar Mohan Nair, Kumar S. Venkitanarayanan
  • Food Microbiology
    Bioenergetic Mechanism for Nisin Resistance, Induced by the Acid Tolerance Response of Listeria monocytogenes
    Marcelo Bonnet, Mohamed M. Rafi, Michael L. Chikindas, Thomas J. Montville
  • Food Microbiology
    Analyses of the Red-Dry-Rough Phenotype of an Escherichia coli O157:H7 Strain and Its Role in Biofilm Formation and Resistance to Antibacterial Agents
    Gaylen A. Uhlich, Peter H. Cooke, Ethan B. Solomon
  • Food Microbiology
    Lipid II-Based Antimicrobial Activity of the Lantibiotic Plantaricin C
    Imke Wiedemann, Tim Böttiger, Raquel Regina Bonelli, Tanja Schneider, Hans-Georg Sahl, Beatriz Martínez
  • Food Microbiology
    Identification of Salmonella enterica Serovar Typhimurium Genes Important for Survival in the Swine Gastric Environment
    Shawn M. D. Bearson, Bradley L. Bearson, Mark A. Rasmussen
  • Food Microbiology
    In Vitro and In Vivo Survival and Transit Tolerance of Potentially Probiotic Strains Carried by Artichokes in the Gastrointestinal Tract
    Francesca Valerio, Palmira De Bellis, Stella Lisa Lonigro, Lorenzo Morelli, Angelo Visconti, Paola Lavermicocca
  • Food Microbiology
    Occurrence of Vibrio parahaemolyticus, V. cholerae, and V. vulnificus in Norwegian Blue Mussels (Mytilus edulis)
    Anette Bauer, Øyvin Østensvik, Malin Florvåg, Øyvind Ørmen, Liv Marit Rørvik
  • Food Microbiology
    Produce Isolates of the Escherichia coli Ont:H52 Serotype That Carry both Shiga Toxin 1 and Stable Toxin Genes
    Steven R. Monday, Christina Keys, Patricia Hanson, Yuelian Shen, Thomas S. Whittam, Peter Feng
  • Food Microbiology
    Arsenic Resistance in Campylobacter spp. Isolated from Retail Poultry Products
    Amy R. Sapkota, Lance B. Price, Ellen K. Silbergeld, Kellogg J. Schwab
  • Food Microbiology
    Absence of VanA- and VanB-Containing Enterococci in Poultry Raised on Nonintensive Production Farms in Brazil
    Diego Batista Xavier, Francisco Ernesto Moreno Bernal, Ricardo Titze-de-Almeida

Microbial Ecology

  • Microbial Ecology
    rRNA and Poly-β-Hydroxybutyrate Dynamics in Bioreactors Subjected to Feast and Famine Cycles
    Dominic Frigon, Gerard Muyzer, Mark van Loosdrecht, Lutgarde Raskin
  • Microbial Ecology
    Introducing TreeClimber, a Test To Compare Microbial Community Structures
    Patrick D. Schloss, Jo Handelsman
  • Microbial Ecology
    Natural Electrotransformation of Lightning-Competent Pseudomonas sp. Strain N3 in Artificial Soil Microcosms
    Hélène Cérémonie, François Buret, Pascal Simonet, Timothy M. Vogel
  • Microbial Ecology
    Fatty Acid-Oxidizing Consortia along a Nutrient Gradient in the Florida Everglades
    Ashvini Chauhan, Andrew Ogram
  • Microbial Ecology
    Abundance and Distribution of Ostreococcus sp. in the San Pedro Channel, California, as Revealed by Quantitative PCR
    Peter D. Countway, David A. Caron
  • Microbial Ecology
    Cultivation of Denitrifying Bacteria: Optimization of Isolation Conditions and Diversity Study
    Kim Heylen, Bram Vanparys, Lieven Wittebolle, Willy Verstraete, Nico Boon, Paul De Vos
  • Microbial Ecology
    Comparison of Vertical Distributions of Prokaryotic Assemblages in the Anoxic Cariaco Basin and Black Sea by Use of Fluorescence In Situ Hybridization
    Xueju Lin, Stuart G. Wakeham, Isabell F. Putnam, Yrene M. Astor, Mary I. Scranton, Andrei Y. Chistoserdov, Gordon T. Taylor
  • Microbial Ecology
    A Suppression Subtractive Hybridization Approach Reveals Niche-Specific Genes That May Be Involved in Predator Avoidance in Marine Synechococcus Isolates
    H. Jones, M. Ostrowski, D. J. Scanlan
  • Microbial Ecology
    Specific Bacterial, Archaeal, and Eukaryotic Communities in Tidal-Flat Sediments along a Vertical Profile of Several Meters
    Reinhard Wilms, Henrik Sass, Beate Köpke, Jürgen Köster, Heribert Cypionka, Bert Engelen
  • Microbial Ecology
    Characterization of Intestinal Microbiota and Response to Dietary Virginiamycin Supplementation in the Broiler Chicken
    Tim J. Dumonceaux, Janet E. Hill, Sean M. Hemmingsen, Andrew G. Van Kessel
  • Microbial Ecology
    Molecular Characterization of Subject-Specific Oral Microflora during Initial Colonization of Enamel
    Patricia I. Diaz, Natalia I. Chalmers, Alexander H. Rickard, Colin Kong, Craig L. Milburn, Robert J. Palmer, Paul E. Kolenbrander
  • Microbial Ecology
    Characterization of Biofilm Formation by Clinically Relevant Serotypes of Group A Streptococci
    Cordula Lembke, Andreas Podbielski, Carlos Hidalgo-Grass, Ludwig Jonas, Emanuel Hanski, Bernd Kreikemeyer
  • Microbial Ecology
    Anaerobic Ammonium-Oxidizing (Anammox) Bacteria and Associated Activity in Fixed-Film Biofilters of a Marine Recirculating Aquaculture System
    Yossi Tal, Joy E. M. Watts, Harold J. Schreier
  • Microbial Ecology
    Succession and Regulation Factors of Small Eukaryote Community Composition in a Lacustrine Ecosystem (Lake Pavin)
    Cécile Lepère, Delphine Boucher, Ludwig Jardillier, Isabelle Domaizon, Didier Debroas
  • Microbial Ecology
    Culture Conditions of Roseobacter Strain 27-4 Affect Its Attachment and Biofilm Formation as Quantified by Real-Time PCR
    Jesper Bartholin Bruhn, Janus Anders Juul Haagensen, Dorthe Bagge-Ravn, Lone Gram
  • Microbial Ecology
    Laboratory-Dependent Bacterial Ecology: a Cautionary Tale
    K. J. O'Keefe, N. M. Morales, H. Ernstberger, G. Benoit, P. E. Turner
  • Microbial Ecology
    Diversity and Distribution of Planctomycetes and Related Bacteria in the Suboxic Zone of the Black Sea
    John Kirkpatrick, Brian Oakley, Clara Fuchsman, Sujatha Srinivasan, James T. Staley, James W. Murray

Biodegradation

  • Biodegradation
    Polychlorinated Biphenyl (PCB)-Degrading Bacteria Associated with Trees in a PCB-Contaminated Site
    Mary Beth Leigh, Petra Prouzová, Martina Macková, Tomáš Macek, David P. Nagle, John S. Fletcher
  • Biodegradation
    Degradation of Aroclor 1242 Dechlorination Products in Sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. Strain RHA1(fcb)
    Jorge L. M. Rodrigues, C. Alan Kachel, Michael R. Aiello, John F. Quensen, Olga V. Maltseva, Tamara V. Tsoi, James M. Tiedje
  • Biodegradation
    Chlorophenol Hydroxylases Encoded by Plasmid pJP4 Differentially Contribute to Chlorophenoxyacetic Acid Degradation
    T. Ledger, D. H. Pieper, B. González
  • Biodegradation
    Methanosarcina spp. Drive Vinyl Chloride Dechlorination via Interspecies Hydrogen Transfer
    Axel C. Heimann, Damien J. Batstone, Rasmus Jakobsen

Environmental Microbiology

  • Environmental Microbiology
    Distribution of Environmental Mycobacteria in Karonga District, Northern Malawi
    Benson Z. Chilima, Ian M. Clark, Sian Floyd, Paul E. M. Fine, Penny R. Hirsch
  • Environmental Microbiology
    Genotyping and Pathogenicity of Viral Hemorrhagic Septicemia Virus from Free-Living Turbot (Psetta maxima) in a Turkish Coastal Area of the Black Sea
    Toyohiko Nishizawa, Hacı Savaş, Hakan Işıdan, Cennet Üstündağ, Hiroshi Iwamoto, Mamoru Yoshimizu
  • Environmental Microbiology
    Discovery of Natural Atypical Nonhemolytic Listeria seeligeri Isolates
    Dmitriy Volokhov, Joseph George, Christine Anderson, Robert E. Duvall, Anthony D. Hitchins
  • Environmental Microbiology
    Development and Characterization of Stable Sediment-Free Anaerobic Bacterial Enrichment Cultures That Dechlorinate Aroclor 1260
    Donna L. Bedard, Jessica J. Bailey, Brandon L. Reiss, Greta Van Slyke Jerzak
  • Environmental Microbiology
    Specific Growth Rate Determines the Sensitivity of Escherichia coli to Thermal, UVA, and Solar Disinfection
    Michael Berney, Hans-Ulrich Weilenmann, Julian Ihssen, Claudio Bassin, Thomas Egli
  • Environmental Microbiology
    Planktonic Replication Is Essential for Biofilm Formation by Legionella pneumophila in a Complex Medium under Static and Dynamic Flow Conditions
    Jörg Mampel, Thomas Spirig, Stefan S. Weber, Janus A. J. Haagensen, Søren Molin, Hubert Hilbi
  • Environmental Microbiology
    Does Green Light Influence the Fluorescence Properties and Structure of Phototrophic Biofilms?
    M. Roldán, F. Oliva, M. A. Gónzalez del Valle, C. Saiz-Jimenez, M. Hernández-Mariné

Mycology

  • Mycology
    Evidence for Outcrossing via the Buller Phenomenon in a Substrate Simultaneously Inoculated with Spores and Mycelium of Agaricus bisporus
    Philippe Callac, Cathy Spataro, Aurélie Caille, Micheline Imbernon
  • Mycology
    Reevaluation of the Life Cycle of Tuber magnatum
    Francesco Paolocci, Andrea Rubini, Claudia Riccioni, Sergio Arcioni
  • Mycology
    Novel Hydrophobic Surface Binding Protein, HsbA, Produced by Aspergillus oryzae
    Shinsaku Ohtaki, Hiroshi Maeda, Toru Takahashi, Youhei Yamagata, Fumihiko Hasegawa, Katsuya Gomi, Tasuku Nakajima, Keietsu Abe
  • Mycology
    Overexpression of the 14α-Demethylase Target Gene (CYP51) Mediates Fungicide Resistance in Blumeriella jaapii
    Zhonghua Ma, Tyre J. Proffer, Janette L. Jacobs, George W. Sundin
  • Mycology
    Oligonucleotide Array for Identification and Detection of Pythium Species
    J. T. Tambong, A. W. A. M. de Cock, N. A. Tinker, C. A. Lévesque
  • Mycology
    Protein Kinase C (PkcA) of Aspergillus nidulans Is Involved in Penicillin Production
    Martina Herrmann, Petra Spröte, Axel A. Brakhage
  • Mycology
    Acanthocytes of Stropharia rugosoannulata Function as a Nematode-Attacking Device
    Hong Luo, Xuan Li, Guohong Li, Yanbo Pan, Keqin Zhang

Enzymology and Protein Engineering

  • Enzymology and Protein Engineering
    A Mono-2-Ethylhexyl Phthalate Hydrolase from a Gordonia sp. That Is Able To Dissimilate Di-2-Ethylhexyl Phthalate
    Tuguhiro Nishioka, Makoto Iwata, Takuya Imaoka, Maiko Mutoh, Yoshihiro Egashira, Takashi Nishiyama, Takashi Shin, Takao Fujii
  • Enzymology and Protein Engineering
    Paenibacillus curdlanolyticus Strain B-6 Xylanolytic-Cellulolytic Enzyme System That Degrades Insoluble Polysaccharides
    Patthra Pason, Khin Lay Kyu, Khanok Ratanakhanokchai
  • Enzymology and Protein Engineering
    Purification and Characterization of TrzF: Biuret Hydrolysis by Allophanate Hydrolase Supports Growth
    Nir Shapir, Gang Cheng, Michael J. Sadowsky, Lawrence P. Wackett
  • Enzymology and Protein Engineering
    Characterization of the P450 Monooxygenase NysL, Responsible for C-10 Hydroxylation during Biosynthesis of the Polyene Macrolide Antibiotic Nystatin in Streptomyces noursei
    Olga Volokhan, Håvard Sletta, Trond E. Ellingsen, Sergey B. Zotchev
  • Enzymology and Protein Engineering
    Pseudomonad Cyclopentadecanone Monooxygenase Displaying an Uncommon Spectrum of Baeyer-Villiger Oxidations of Cyclic Ketones
    Hiroaki Iwaki, Shaozhao Wang, Stephan Grosse, Hélène Bergeron, Ayako Nagahashi, Jittiwud Lertvorachon, Jianzhong Yang, Yasuo Konishi, Yoshie Hasegawa, Peter C. K. Lau
  • Enzymology and Protein Engineering
    Diversity and Biocatalytic Potential of Epoxide Hydrolases Identified by Genome Analysis
    Bert van Loo, Jaap Kingma, Michael Arand, Marcel G. Wubbolts, Dick B. Janssen
  • Enzymology and Protein Engineering
    Analysis of the Thermostability Determinants of Hyperthermophilic Esterase EstE1 Based on Its Predicted Three-Dimensional Structure
    Jin-Kyu Rhee, Do-Yun Kim, Dae-Gyun Ahn, Jung-Hyuk Yun, Seung-Hwan Jang, Hang-Cheol Shin, Hyun-Soo Cho, Jae-Gu Pan, Jong-Won Oh

Invertebrate Microbiology

  • Invertebrate Microbiology
    Occurrence of Six Honeybee Viruses in Diseased Austrian Apiaries
    Olga Berényi, Tamás Bakonyi, Irmgard Derakhshifar, Hemma Köglberger, Norbert Nowotny
  • Invertebrate Microbiology
    Toxicity and Mode of Action of Bacillus thuringiensis Cry Proteins in the Mediterranean Corn Borer, Sesamia nonagrioides (Lefebvre)
    Joel González-Cabrera, Gema P. Farinós, Silvia Caccia, Mercedes Díaz-Mendoza, Pedro Castañera, Maria Giovanna Leonardi, Barbara Giordana, Juan Ferré
  • Invertebrate Microbiology
    A New C-Type Lectin Similar to the Human Immunoreceptor DC-SIGN Mediates Symbiont Acquisition by a Marine Nematode
    Silvia Bulgheresi, Irma Schabussova, Tie Chen, Nicholas P. Mullin, Rick M. Maizels, Jörg A. Ott
  • Invertebrate Microbiology
    Isolation, Pure Culture, and Characterization of “Candidatus Arsenophonus arthropodicus,” an Intracellular Secondary Endosymbiont from the Hippoboscid Louse Fly Pseudolynchia canariensis
    Colin Dale, Michael Beeton, Christopher Harbison, Tait Jones, Mauricio Pontes

Plant Microbiology

  • Plant Microbiology
    Assessment of the Environmental Fate of the Biological Control Agent of Fire Blight, Pseudomonas fluorescens EPS62e, on Apple by Culture and Real-Time PCR Methods
    Marta Pujol, Esther Badosa, Charles Manceau, Emilio Montesinos
  • Plant Microbiology
    Symbiotic Bradyrhizobium japonicum Reduces N2O Surrounding the Soybean Root System via Nitrous Oxide Reductase
    Reiko Sameshima-Saito, Kaori Chiba, Junta Hirayama, Manabu Itakura, Hisayuki Mitsui, Shima Eda, Kiwamu Minamisawa
  • Plant Microbiology
    Identification of Sinorhizobium meliloti Early Symbiotic Genes by Use of a Positive Functional Screen
    Xue-Song Zhang, Hai-Ping Cheng

Public Health Microbiology

  • Public Health Microbiology
    Biodiversity of Amoebae and Amoeba-Resisting Bacteria in a Hospital Water Network
    Vincent Thomas, Katia Herrera-Rimann, Dominique S. Blanc, Gilbert Greub
  • Public Health Microbiology
    Male-Specific Coliphages as Indicators of Thermal Inactivation of Pathogens in Biosolids
    Sharon P. Nappier, Michael D. Aitken, Mark D. Sobsey
  • Public Health Microbiology
    Clonal Dissemination of Escherichia coli O157:H7 Subtypes among Dairy Farms in Northeast Ohio
    Amy N. Wetzel, Jeffrey T. LeJeune
  • Public Health Microbiology
    Quantitative Real-Time Legionella PCR for Environmental Water Samples: Data Interpretation
    Philippe Joly, Pierre-Alain Falconnet, Janine André, Nicole Weill, Monique Reyrolle, François Vandenesch, Max Maurin, Jerome Etienne, Sophie Jarraud
  • Public Health Microbiology
    Toxigenic Vibrio cholerae in the Aquatic Environment of Mathbaria, Bangladesh
    Munirul Alam, Marzia Sultana, G. Balakrish Nair, R. Bradley Sack, David A. Sack, A. K. Siddique, Afsar Ali, Anwar Huq, Rita R. Colwell
  • Public Health Microbiology
    Shear Stress, Temperature, and Inoculation Concentration Influence the Adhesion of Water-Stressed Helicobacter pylori to Stainless Steel 304 and Polypropylene
    N. F. Azevedo, A. R. Pinto, N. M. Reis, M. J. Vieira, C. W. Keevil
  • Public Health Microbiology
    Antimicrobial Susceptibility and Characterization of Salmonella Isolates from Processed Bison Carcasses
    Qiongzhen Li, Jerod A. Skyberg, Mohamed K. Fakhr, Julie S. Sherwood, Lisa K. Nolan, Catherine M. Logue
  • Public Health Microbiology
    Safety Assessment of the Oral Cavity Probiotic Streptococcus salivarius K12
    Jeremy P. Burton, Philip A. Wescombe, Chris J. Moore, Chris N. Chilcott, John R. Tagg
  • Public Health Microbiology
    Prevalence of Borrelia burgdorferi Sensu Lato and Anaplasmataceae Members in Ixodes ricinus Ticks in Alsace, a Focus of Lyme Borreliosis Endemicity in France
    Elisabeth Ferquel, Martine Garnier, Jérôme Marie, Claire Bernède-Bauduin, Guy Baranton, Claudine Pérez-Eid, Danièle Postic

Genetics and Molecular Biology

  • Genetics and Molecular Biology
    An Efficient Method of Selectable Marker Gene Excision by Xer Recombination for Gene Replacement in Bacterial Chromosomes
    Alexandra E. Bloor, Rocky M. Cranenburgh
  • Genetics and Molecular Biology
    Identification of Essential Operons with a Rhamnose-Inducible Promoter in Burkholderia cenocepacia
    Silvia T. Cardona, Carmen L. Mueller, Miguel A. Valvano
  • Genetics and Molecular Biology
    Thiamine-Auxotrophic Mutants of Pseudomonas fluorescens CHA0 Are Defective in Cell-Cell Signaling and Biocontrol Factor Expression
    Christophe Dubuis, Joëlle Rolli, Matthias Lutz, Geneviève Défago, Dieter Haas
  • Genetics and Molecular Biology
    The Locus Coding for the 3-Nitrobenzoate Dioxygenase of Comamonas sp. Strain JS46 Is Flanked by IS1071 Elements and Is Subject to Deletion and Inversion Events
    Miguel A. Providenti, Rachel E. Shaye, Krista D. Lynes, Neil T. McKenna, Jason M. O'Brien, Sarah Rosolen, R. Campbell Wyndham, Iain B. Lambert
  • Genetics and Molecular Biology
    Genes of Escherichia coli O157:H7 That Are Involved in High-Pressure Resistance
    Aaron S. Malone, Yoon-Kyung Chung, Ahmed E. Yousef
  • Genetics and Molecular Biology
    Both msa Genes in Renibacterium salmoninarum Are Needed for Full Virulence in Bacterial Kidney Disease
    Alison M. Coady, Anthony L. Murray, Diane G. Elliott, Linda D. Rhodes
  • Genetics and Molecular Biology
    Sequencing and Heterologous Expression of an Epimerase and Two Lyases from Iminodisuccinate-Degrading Bacteria
    Bettina Bäuerle, Željko Cokesa, Silvia Hofmann, Paul-Gerhard Rieger
  • Genetics and Molecular Biology
    Overexpression and Characterization of an Iron Storage and DNA-Binding Dps Protein from Trichodesmium erythraeum
    M. Castruita, M. Saito, P. C. Schottel, L. A. Elmegreen, S. Myneni, E. I. Stiefel, F. M. M. Morel
  • Genetics and Molecular Biology
    Characterization of Streptococcus thermophilus Host Range Phage Mutants
    Martin Duplessis, Céline M. Lévesque, Sylvain Moineau
  • Genetics and Molecular Biology
    SXT-Related Integrating Conjugative Element in New World Vibrio cholerae
    Vincent Burrus, Roberto Quezada-Calvillo, Joeli Marrero, Matthew K. Waldor

Methods

  • Methods
    Development of a Quantitative Assay for Mycobacterial Endogenous Arabinase and Ensuing Studies of Arabinase Levels and Arabinan Metabolism in Mycobacterium smegmatis
    Xu Dong, Suresh Bhamidi, Michael Scherman, Yi Xin, Michael R. McNeil
  • Methods
    Detection of Norovirus Capsid Protein in Authentic Standards and in Stool Extracts by Matrix-Assisted Laser Desorption Ionization and Nanospray Mass Spectrometry
    David R. Colquhoun, Kellogg J. Schwab, Robert N. Cole, Rolf U. Halden
  • Methods
    Quantitative PCR Targeting 16S rRNA and Reductive Dehalogenase Genes Simultaneously Monitors Multiple Dehalococcoides Strains
    Kirsti M. Ritalahti, Benjamin K. Amos, Youlboong Sung, Qingzhong Wu, Stephen S. Koenigsberg, Frank E. Löffler
  • Methods
    Novel Luciferase Reporter System for In Vitro and Organ-Specific Monitoring of Differential Gene Expression in Listeria monocytogenes
    Peter A. Bron, Ian R. Monk, Sinéad C. Corr, Colin Hill, Cormac G. M. Gahan
  • Methods
    Fluorescence In Situ Hybridization and Spectral Imaging of Coral-Associated Bacterial Communities
    T. D. Ainsworth, M. Fine, L. L. Blackall, O. Hoegh-Guldberg

Geomicrobiology

  • Geomicrobiology
    Geobacter lovleyi sp. nov. Strain SZ, a Novel Metal-Reducing and Tetrachloroethene-Dechlorinating Bacterium
    Youlboong Sung, Kelly E. Fletcher, Kirsti M. Ritalahti, Robert P. Apkarian, Natalia Ramos-Hernández, Robert A. Sanford, Noha M. Mesbah, Frank E. Löffler
  • Geomicrobiology
    Bacillus Endospores Isolated from Granite: Close Molecular Relationships to Globally Distributed Bacillus spp. from Endolithic and Extreme Environments
    Patricia Fajardo-Cavazos, Wayne Nicholson
  • Geomicrobiology
    Reduction of Soluble and Insoluble Iron Forms by Membrane Fractions of Shewanella oneidensis Grown under Aerobic and Anaerobic Conditions
    Shane S. Ruebush, Susan L. Brantley, Ming Tien

Errata

  • Erratum
    Diversity of Proteolytic Clostridium botulinum Strains, Determined by a Pulsed-Field Gel Electrophoresis Approach
    Mari Nevas, Miia Lindström, Sebastian Hielm, K. Johanna Björkroth, Michael W. Peck, Hannu Korkeala
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Applied and Environmental Microbiology: 72 (4)

In This Issue

volume 72, issue 4
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  • Guest Commentary
  • Evolutionary and Genomic Microbiology
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  • Community Structure of Arbuscular Mycorrhizal Fungi in Soils of Switchgrass Harvested for Bioenergy
  • Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation
  • Following Coffee Production from Cherries to Cup: Microbiological and Metabolomic Analysis of Wet Processing of Coffea arabica
  • Airborne Disinfection by Dry Fogging Efficiently Inactivates Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Mycobacteria, and Bacterial Spores and Shows Limitations of Commercial Spore Carriers
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