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Applied and Environmental Microbiology
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Table of Contents

August 15, 2007; Volume 73,Issue 16

Plant Microbiology

  • Plant Microbiology
    Putative Porin of Bradyrhizobium sp. (Lupinus) Bacteroids Induced by Glyphosate
    Nuria de María, Ángeles Guevara, M. Teresa Serra, Isabel García-Luque, Alfonso González-Sama, Mario García de Lacoba, M. Rosario de Felipe, Mercedes Fernández-Pascual
  • Plant Microbiology
    The Tomato Rhizosphere, an Environment Rich in Nitrogen-Fixing Burkholderia Species with Capabilities of Interest for Agriculture and Bioremediation
    Jesús Caballero-Mellado, Janette Onofre-Lemus, Paulina Estrada-de los Santos, Lourdes Martínez-Aguilar

Food Microbiology

  • Food Microbiology
    Effectiveness of Standard UV Depuration at Inactivating Cryptosporidium parvum Recovered from Spiked Pacific Oysters (Crassostrea gigas)
    O. Sunnotel, W. J. Snelling, N. McDonough, L. Browne, J. E. Moore, J. S. G. Dooley, C. J. Lowery
  • Food Microbiology
    Use of Multilocus Sequence Typing To Investigate the Association between the Presence of Campylobacter spp. in Broiler Drinking Water and Campylobacter Colonization in Broilers
    I. D. Ogden, M. MacRae, M. Johnston, N. J. C. Strachan, A. J. Cody, K. E. Dingle, D. G. Newell
  • Food Microbiology
    Microplate Fluorescence Assay for Measurement of the Ability of Strains of Listeria monocytogenes from Meat and Meat-Processing Plants To Adhere to Abiotic Surfaces
    Rachel Gamble, Peter M. Muriana

Physiology and Biotechnology

  • PHYSIOLOGY AND BIOTECHNOLOGY
    Acetamide Selection of Kluyveromyces lactis Cells Transformed with an Integrative Vector Leads to High-Frequency Formation of Multicopy Strains
    Jeremiah D. Read, Paul A. Colussi, Mehul B. Ganatra, Christopher H. Taron
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Essential Role of Cytochrome bd-Related Oxidase in Cyanide Resistance of Pseudomonas pseudoalcaligenes CECT5344
    Alberto Quesada, M. Isabel Guijo, Faustino Merchán, Blas Blázquez, M. Isabel Igeño, Rafael Blasco
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Metabolic Engineering of Bacillus subtilis for Ethanol Production: Lactate Dehydrogenase Plays a Key Role in Fermentative Metabolism
    Susana Romero, Enrique Merino, Francisco Bolívar, Guillermo Gosset, Alfredo Martinez
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Glutathione Protects Lactococcus lactis against Acid Stress
    Juan Zhang, Rui-Yan Fu, Jeroen Hugenholtz, Yin Li, Jian Chen
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Effects of Intranasal Administration of a Leptin-Secreting Lactococcus lactis Recombinant on Food Intake, Body Weight, and Immune Response of Mice
    Luis G. Bermúdez-Humarán, Sébastien Nouaille, Vladimir Zilberfarb, Gérard Corthier, Alexandra Gruss, Philippe Langella, Tarik Issad
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Lack of Electricity Production by Pelobacter carbinolicus Indicates that the Capacity for Fe(III) Oxide Reduction Does Not Necessarily Confer Electron Transfer Ability to Fuel Cell Anodes
    Hanno Richter, Martin Lanthier, Kelly P. Nevin, Derek R. Lovley
  • PHYSIOLOGY AND BIOTECHNOLOGY
    Saccharomyces cerevisiae Signature Genes for Predicting Nitrogen Deficiency during Alcoholic Fermentation
    A. Mendes-Ferreira, M. del Olmo, J. García-Martínez, E. Jiménez-Martí, C. Leão, A. Mendes-Faia, J. E. Pérez-Ortín
  • PHYSIOLOGY AND BIOTECHNOLOGY
    New Enzymatic Method of Chiral Amino Acid Synthesis by Dynamic Kinetic Resolution of Amino Acid Amides: Use of Stereoselective Amino Acid Amidases in the Presence of α-Amino-ε-Caprolactam Racemase
    Shigenori Yamaguchi, Hidenobu Komeda, Yasuhisa Asano

Mycology

  • Mycology
    Identification and In Vivo Functional Analysis by Gene Disruption of ctnA, an Activator Gene Involved in Citrinin Biosynthesis in Monascus purpureus
    Takeo Shimizu, Hiroshi Kinoshita, Takuya Nihira
  • Mycology
    At Least Two Origins of Fungicide Resistance in Grapevine Downy Mildew Populations
    Wei-Jen Chen, François Delmotte, Sylvie Richard Cervera, Lisette Douence, Charles Greif, Marie-France Corio-Costet
  • Mycology
    Identification of Internal Transcribed Spacer Sequence Motifs in Truffles: a First Step toward Their DNA Bar Coding
    Khalid El Karkouri, Claude Murat, Elisa Zampieri, Paola Bonfante

Public Health Microbiology

  • Public Health Microbiology
    Attachment of Enteric Viruses to Bottles
    S. Butot, T. Putallaz, C. Croquet, G. Lamothe, R. Meyer, H. Joosten, G. Sánchez
  • Public Health Microbiology
    Development of a Swine-Specific Fecal Pollution Marker Based on Host Differences in Methanogen mcrA Genes
    Jennifer A. Ufnar, David F. Ufnar, Shiao Y. Wang, R. D. Ellender
  • Public Health Microbiology
    Effects of Different Animal Waste Treatment Technologies on Detection and Viability of Porcine Enteric Viruses
    Verónica P. Costantini, Ana C. Azevedo, Xin Li, Mike C. Williams, Frederick C. Michel, Linda J. Saif
  • Public Health Microbiology
    Legionella pneumophila in Cooling Towers: Fluctuations in Counts, Determination of Genetic Variability by Pulsed-Field Gel Electrophoresis (PFGE), and Persistence of PFGE Patterns
    Sonia Ragull, Marian Garcia-Nuñez, Maria Luisa Pedro-Botet, Nieves Sopena, Maria Esteve, Rafael Montenegro, Miquel Sabrià

Microbial Ecology

  • Microbial Ecology
    Use of Propidium Monoazide for Live/Dead Distinction in Microbial Ecology
    Andreas Nocker, Priscilla Sossa-Fernandez, Mark D. Burr, Anne K. Camper
  • Microbial Ecology
    Effect of Afforestation and Reforestation of Pastures on the Activity and Population Dynamics of Methanotrophic Bacteria
    Brajesh K. Singh, Kevin R. Tate, Gokul Kolipaka, Carolyn B. Hedley, Catriona A. Macdonald, Peter Millard, J. Colin Murrell
  • Microbial Ecology
    Molecular Detection and Ecological Significance of the Cyanobacterial Genera Geitlerinema and Leptolyngbya in Black Band Disease of Corals
    Jamie L. Myers, Raju Sekar, Laurie L. Richardson
  • Microbial Ecology
    High Rates of Sulfate Reduction in a Low-Sulfate Hot Spring Microbial Mat Are Driven by a Low Level of Diversity of Sulfate-Respiring Microorganisms
    Jesse G. Dillon, Susan Fishbain, Scott R. Miller, Brad M. Bebout, Kirsten S. Habicht, Samuel M. Webb, David A. Stahl
  • Microbial Ecology
    Virus Attachment to Transparent Exopolymeric Particles along Trophic Gradients in the Southwestern Lagoon of New Caledonia
    Xavier Mari, Marie-Emmanuelle Kerros, Markus G. Weinbauer
  • Microbial Ecology
    Diversity of Nitrite Reductase Genes in “Candidatus Accumulibacter phosphatis”-Dominated Cultures Enriched by Flow-Cytometric Sorting
    Ryuki Miyauchi, Kazuma Oki, Yoshiteru Aoi, Satoshi Tsuneda

Geomicrobiology

  • Geomicrobiology
    Effects of Imposed Salinity Gradients on Dissimilatory Arsenate Reduction, Sulfate Reduction, and Other Microbial Processes in Sediments from Two California Soda Lakes
    T. R. Kulp, S. Han, C. W. Saltikov, B. D. Lanoil, K. Zargar, R. S. Oremland

Genetics and Molecular Biology

  • Genetics and Molecular Biology
    Use of a Dominant rpsL Allele Conferring Streptomycin Dependence for Positive and Negative Selection in Thermus thermophilus
    Emilio Blas-Galindo, Felipe Cava, Eduardo López-Viñas, Jesús Mendieta, José Berenguer
  • Genetics and Molecular Biology
    Development of Innovative Pediocin PA-1 by DNA Shuffling among Class IIa Bacteriocins
    Tatsuya Tominaga, Yoshinori Hatakeyama
  • Genetics and Molecular Biology
    Production and Secretion Stress Caused by Overexpression of Heterologous α-Amylase Leads to Inhibition of Sporulation and a Prolonged Motile Phase in Bacillus subtilis
    Andrzej T. Lulko, Jan-Willem Veening, Girbe Buist, Wiep Klaas Smits, Evert Jan Blom, Aaron C. Beekman, Sierd Bron, Oscar P. Kuipers

Enzymology and Protein Engineering

  • Enzymology and Protein Engineering
    Molecular and Biochemical Characterization of 3-Hydroxybenzoate 6-Hydroxylase from Polaromonas naphthalenivorans CJ2
    Minjeong Park, Yeji Jeon, Ho Hee Jang, Hyun-Su Ro, Woojun Park, Eugene L. Madsen, Che Ok Jeon
  • Enzymology and Protein Engineering
    Recombinant Expression and Characterization of a Reducing-End Xylose-Releasing Exo-Oligoxylanase from Bifidobacterium adolescentis
    Stijn Lagaert, Steven Van Campenhout, Annick Pollet, Tine M. Bourgois, Jan A. Delcour, Christophe M. Courtin, Guido Volckaert
  • Enzymology and Protein Engineering
    Newly Discovered Penicillin Acylase Activity of Aculeacin A Acylase from Actinoplanes utahensis
    Jesús Torres-Bacete, Daniel Hormigo, Maribel Stuart, Miguel Arroyo, Pedro Torres, María P. Castillón, Carmen Acebal, José L. García, Isabel de la Mata

Environmental Microbiology

  • Environmental Microbiology
    Real-Time Reverse Transcription-PCR for Transcriptional Expression Analysis of Virulence and Housekeeping Genes in Viable but Nonculturable Vibrio parahaemolyticus after Recovery of Culturability
    François Coutard, Solen Lozach, Monique Pommepuy, Dominique Hervio-Heath
  • Environmental Microbiology
    Impact of Alginate Conditioning Film on Deposition Kinetics of Motile and Nonmotile Pseudomonas aeruginosa Strains
    Alexis J. de Kerchove, Menachem Elimelech

Invertebrate Microbiology

  • Invertebrate Microbiology
    Differences between Bacterial Communities in the Gut of a Soil-Feeding Termite (Cubitermes niokoloensis) and Its Mounds
    Saliou Fall, Jérôme Hamelin, Farma Ndiaye, Komi Assigbetse, Michel Aragno, Jean Luc Chotte, Alain Brauman
  • Invertebrate Microbiology
    New Insights into the Colonization and Release Processes of Xenorhabdus nematophila and the Morphology and Ultrastructure of the Bacterial Receptacle of Its Nematode Host, Steinernema carpocapsae
    Holly Snyder, S. Patricia Stock, Sam-Kyu Kim, Yolanda Flores-Lara, Steven Forst

Methods

  • Methods
    Evaluation of Culture Methods To Identify Bovine Feces with High Concentrations of Escherichia coli O157
    J. Trent Fox, David G. Renter, Michael W. Sanderson, Daniel U. Thomson, Kelly F. Lechtenberg, T. G. Nagaraja
  • Methods
    Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
    Qiong Wang, George M. Garrity, James M. Tiedje, James R. Cole
  • Methods
    Interpreting Ecological Diversity Indices Applied to Terminal Restriction Fragment Length Polymorphism Data: Insights from Simulated Microbial Communities
    Christopher B. Blackwood, Deborah Hudleston, Donald R. Zak, Jeffrey S. Buyer

Errata

  • Errata
    Diversity and Mechanisms of Alkali Tolerance in Lactobacilli
    Yuki Sawatari, Atsushi Yokota
  • Errata
    Faster, Simpler, More-Specific Methods for Improved Molecular Detection of Phytophthora ramorum in the Field
    J. A. Tomlinson, I. Barker, N. Boonham
  • Errata
    Salinity Constraints on Subsurface Archaeal Diversity and Methanogenesis in Sedimentary Rock Rich in Organic Matter
    Patricia J. Waldron, Steven T. Petsch, Anna M. Martini, Klaus Nüsslein
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Applied and Environmental Microbiology: 73 (16)

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volume 73, issue 16
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  • Following Coffee Production from Cherries to Cup: Microbiological and Metabolomic Analysis of Wet Processing of Coffea arabica
  • Airborne Disinfection by Dry Fogging Efficiently Inactivates Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Mycobacteria, and Bacterial Spores and Shows Limitations of Commercial Spore Carriers
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