Applied and Environmental Microbiology: 73 (3)

February 1, 2007; Volume 73,Issue 3

Minireviews

MINIREVIEW | MINIREVIEWS
Bacterial Genes Responsible for the Biosynthesis of Eicosapentaenoic and Docosahexaenoic Acids and Their Heterologous Expression
Hidetoshi Okuyama, Yoshitake Orikasa, Takanori Nishida, Kazuo Watanabe, Naoki Morita

Food Microbiology

Food Microbiology
Greater Diversity of Shiga Toxin-Encoding Bacteriophage Insertion Sites among Escherichia coli O157:H7 Isolates from Cattle than in Those from Humans
Thomas E. Besser, Nurmohammad Shaikh, Nicholas J. Holt, Phillip I. Tarr, Michael E. Konkel, Preeti Malik-Kale, Coilin W. Walsh, Thomas S. Whittam, James L. Bono
Food Microbiology
Antibiotic Resistances of Starter and Probiotic Strains of Lactic Acid Bacteria
Anja S. Hummel, Christian Hertel, Wilhelm H. Holzapfel, Charles M. A. P. Franz
Food Microbiology
Biotransformation of Patulin by Gluconobacter oxydans
A. Ricelli, F. Baruzzi, M. Solfrizzo, M. Morea, F. P. Fanizzi
Food Microbiology
Inhibitory Impact of Bifidobacteria on the Transfer of β-Lactam Resistance among Enterobacteriaceae in the Gnotobiotic Mouse Digestive Tract
C. Moubareck, M. Lecso, E. Pinloche, M. J. Butel, F. Doucet-Populaire
Food Microbiology
Inhibition of Staphylococcus aureus Growth on Tellurite-Containing Media by Lactobacillus reuteri Is Dependent on CyuC and Thiol Production
Mark S. Turner, Raquel Lo, Philip M. Giffard
Food Microbiology
Recovery of Mycobacterium bovis from Soft Fresh Cheese Originating in Mexico
N. Beth Harris, Janet Payeur, Doris Bravo, Ruben Osorio, Tod Stuber, David Farrell, Debra Paulson, Scarlett Treviso, Andrea Mikolon, Alfonso Rodriguez-Lainz, Shannon Cernek-Hoskins, Robert Rast, Michele Ginsberg, Hailu Kinde
Food Microbiology
Differentiation of Listeria monocytogenes Serovars by Using Artificial Neural Network Analysis of Fourier-Transformed Infrared Spectra
Cecilia A. Rebuffo-Scheer, Jürgen Schmitt, Siegfried Scherer

Microbial Ecology

Microbial Ecology
Correlation of Functional Instability and Community Dynamics in Denitrifying Dispersed-Growth Reactors
M. E. Gentile, C. M. Jessup, J. L. Nyman, C. S. Criddle
Microbial Ecology
Prevalence of Streptococcus suis Genotypes in Wild Boars of Northwestern Germany
Christoph G. Baums, Gerd Josef Verkühlen, Thomas Rehm, Luciana M. G. Silva, Martin Beyerbach, Klaus Pohlmeyer, Peter Valentin-Weigand
Microbial Ecology
Diversity of Fungi, Bacteria, and Actinomycetes on Leaves Decomposing in a Stream
Mitali Das, Todd V. Royer, Laura G. Leff
Microbial Ecology
Identification of Bacterial Groups Preferentially Associated with Mycorrhizal Roots of Medicago truncatula
P. Offre, B. Pivato, S. Siblot, E. Gamalero, T. Corberand, P. Lemanceau, C. Mougel
Microbial Ecology
Succession of Sulfur-Oxidizing Bacteria in the Microbial Community on Corroding Concrete in Sewer Systems
Satoshi Okabe, Mitsunori Odagiri, Tsukasa Ito, Hisashi Satoh
Microbial Ecology
Chronic Helicobacter pylori Infection Does Not Significantly Alter the Microbiota of the Murine Stomach
Mai Ping Tan, Maria Kaparakis, Maja Galic, John Pedersen, Martin Pearse, Odilia L. C. Wijburg, Peter H. Janssen, Richard A. Strugnell
Microbial Ecology
Prevalence of ColE1-Like Plasmids and Colicin K Production among Uropathogenic Escherichia coli Strains and Quantification of Inhibitory Activity of Colicin K
Matija Rijavec, Maruška Budič, Peter Mrak, Manica Müller-Premru, Zdravko Podlesek, Darja Žgur-Bertok

Public Health Microbiology

Public Health Microbiology
Colonization, Persistence, and Tissue Tropism of Escherichia coli O26 in Conventionally Reared Weaned Lambs
İlknur Aktan, Roberto M. La Ragione, Martin J. Woodward
Public Health Microbiology
High-Throughput and Quantitative Procedure for Determining Sources of Escherichia coli in Waterways by Using Host-Specific DNA Marker Genes
Tao Yan, Matthew J. Hamilton, Michael J. Sadowsky
Public Health Microbiology
Detection of UV-Induced Thymine Dimers in Individual Cryptosporidium parvum and Cryptosporidium hominis Oocysts by Immunofluorescence Microscopy
B. H. Al-Adhami, R. A. B. Nichols, J. R. Kusel, J. O'Grady, H. V. Smith
Public Health Microbiology
Prevalence of Escherichia coli O157:H7 in Gallbladders of Beef Cattle
S. Reinstein, J. T. Fox, X. Shi, T. G. Nagaraja
Public Health Microbiology
Molecular Characterization of Cryptosporidium Isolates from Humans and Animals in Iran
Ahmad Reza Meamar, Karine Guyot, Gabriela Certad, Eduardo Dei-Cas, Mino Mohraz, Mehdi Mohebali, Kazem Mohammad, Amir Ali Mehbod, Sasan Rezaie, Mostafa Rezaian

Methods

Methods
Novel Quantitative Biosystem for Modeling Physiological Fluid Shear Stress on Cells
Eric A. Nauman, C. Mark Ott, Ed Sander, Don L. Tucker, Duane Pierson, James W. Wilson, Cheryl A. Nickerson
Methods
Evaluation of a Wipe Surface Sample Method for Collection of Bacillus Spores from Nonporous Surfaces
Gary S. Brown, Rita G. Betty, John E. Brockmann, Daniel A. Lucero, Caroline A. Souza, Kathryn S. Walsh, Raymond M. Boucher, Mathew Tezak, Mollye C. Wilson, Todd Rudolph
Methods
Construction of a Vibrio splendidus Mutant Lacking the Metalloprotease Gene vsm by Use of a Novel Counterselectable Suicide Vector
Frédérique Le Roux, Johan Binesse, Denis Saulnier, Didier Mazel
Methods
Nutrient Amendments in Soil DNA Stable Isotope Probing Experiments Reduce the Observed Methanotroph Diversity
Aurélie Cébron, Levente Bodrossy, Nancy Stralis-Pavese, Andrew C. Singer, Ian P. Thompson, James I. Prosser, J. Colin Murrell
Methods
Multiplex Quantitative Real-Time Reverse Transcriptase PCR for F⁺-Specific RNA Coliphages: a Method for Use in Microbial Source Tracking
Marek Kirs, David C. Smith
Methods
Operon Prediction for Sequenced Bacterial Genomes without Experimental Information
Nicholas H. Bergman, Karla D. Passalacqua, Philip C. Hanna, Zhaohui S. Qin
Methods
Luminescent Whole-Cell Cyanobacterial Bioreporter for Measuring Fe Availability in Diverse Marine Environments
Ramakrishna Boyanapalli, George S. Bullerjahn, Christa Pohl, Peter L. Croot, Philip W. Boyd, R. Michael L. McKay

Physiology and Biotechnology

PHYSIOLOGY AND BIOTECHNOLOGY
Shewanella oneidensis MR-1 Fluxome under Various Oxygen Conditions
Yinjie J. Tang, Judy S. Hwang, David E. Wemmer, Jay D. Keasling
PHYSIOLOGY AND BIOTECHNOLOGY
Coupling of Methanothermobacter thermautotrophicus Methane Formation and Growth in Fed-Batch and Continuous Cultures under Different H₂ Gassing Regimens
Linda M. I. de Poorter, Wim J. Geerts, Jan T. Keltjens
PHYSIOLOGY AND BIOTECHNOLOGY
Reduced Folate Supply as a Key to Enhanced l-Serine Production by Corynebacterium glutamicum
Michael Stolz, Petra Peters-Wendisch, Helga Etterich, Tanja Gerharz, Robert Faurie, Hermann Sahm, Holger Fersterra, Lothar Eggeling
PHYSIOLOGY AND BIOTECHNOLOGY
Use of Artificial Neural Networks and a Gamma-Concept-Based Approach To Model Growth of and Bacteriocin Production by Streptococcus macedonicus ACA-DC 198 under Simulated Conditions of Kasseri Cheese Production
Panayiota Poirazi, Frédéric Leroy, Marina D. Georgalaki, Anastassios Aktypis, Luc De Vuyst, Effie Tsakalidou
PHYSIOLOGY AND BIOTECHNOLOGY
Isolation and Characterization of Brewer's Yeast Variants with Improved Fermentation Performance under High-Gravity Conditions
Lies Blieck, Geert Toye, Françoise Dumortier, Kevin J. Verstrepen, Freddy R. Delvaux, Johan M. Thevelein, Patrick Van Dijck
PHYSIOLOGY AND BIOTECHNOLOGY
Microbial Community Structure and Dynamics of Dark Fire-Cured Tobacco Fermentation
Michele Di Giacomo, Marianna Paolino, Daniele Silvestro, Giovanni Vigliotta, Francesco Imperi, Paolo Visca, Pietro Alifano, Dino Parente
PHYSIOLOGY AND BIOTECHNOLOGY
Role of Cytochrome bd Oxidase from Corynebacterium glutamicum in Growth and Lysine Production
Armin Kabus, Axel Niebisch, Michael Bott
PHYSIOLOGY AND BIOTECHNOLOGY
Induction of a Global Stress Response during the First Step of Escherichia coli Plate Growth
Caroline Cuny, Maïalène Lesbats, Sam Dukan
PHYSIOLOGY AND BIOTECHNOLOGY
The Presence of N-Terminal Secretion Signal Sequences Leads to Strong Stimulation of the Total Expression Levels of Three Tested Medically Important Proteins during High-Cell-Density Cultivations of Escherichia coli
H. Sletta, A. Tøndervik, S. Hakvåg, T. E. Vee Aune, A. Nedal, R. Aune, G. Evensen, S. Valla, T. E. Ellingsen, T. Brautaset
PHYSIOLOGY AND BIOTECHNOLOGY
Induction by Hypoxia of Heterologous-Protein Production with the KlPDC1 Promoter in Yeasts
Andrea Camattari, Michele M. Bianchi, Paola Branduardi, Danilo Porro, Luca Brambilla
PHYSIOLOGY AND BIOTECHNOLOGY
Cyclohexane Carboxylate and Benzoate Formation from Crotonate in Syntrophus aciditrophicus
Housna Mouttaki, Mark A. Nanny, Michael J. McInerney
PHYSIOLOGY AND BIOTECHNOLOGY
Mixed-Valence Cytoplasmic Iron Granules Are Linked to Anaerobic Respiration
S. Glasauer, S. Langley, M. Boyanov, B. Lai, K. Kemner, T. J. Beveridge
PHYSIOLOGY AND BIOTECHNOLOGY
Role of Branched-Chain Fatty Acids in pH Stress Tolerance in Listeria monocytogenes
Efstathios S. Giotis, David A. McDowell, Ian S. Blair, Brian J. Wilkinson
PHYSIOLOGY AND BIOTECHNOLOGY
Chaperone Hsp31 Contributes to Acid Resistance in Stationary-Phase Escherichia coli
Mirna Mujacic, François Baneyx

Mycology

Mycology
Rhizonin, the First Mycotoxin Isolated from the Zygomycota, Is Not a Fungal Metabolite but Is Produced by Bacterial Endosymbionts
Laila P. Partida-Martinez, Carina Flores de Looß, Keishi Ishida, Mie Ishida, Martin Roth, Katrin Buder, Christian Hertweck

Evolutionary and Genomic Microbiology

Evolutionary and Genomic Microbiology
The Unique 16S rRNA Genes of Piezophiles Reflect both Phylogeny and Adaptation
Federico M. Lauro, Roger A. Chastain, Lesley E. Blankenship, A. Aristides Yayanos, Douglas H. Bartlett

Invertebrate Microbiology

Invertebrate Microbiology
Isolation of Rickettsia rhipicephali and Rickettsia bellii from Haemaphysalis juxtakochi Ticks in the State of São Paulo, Brazil
Marcelo B. Labruna, Richard C. Pacheco, Leonardo J. Richtzenhain, Matias P. J. Szabó
Invertebrate Microbiology
Characterization of Chimeric Bacillus thuringiensis Vip3 Toxins
Jun Fang, Xiaoli Xu, Ping Wang, Jian-Zhou Zhao, Anthony M. Shelton, Jiaan Cheng, Ming-Guang Feng, Zhicheng Shen
Invertebrate Microbiology
Coral Disease Diagnostics: What's between a Plague and a Band?
T. D. Ainsworth, E. Kramasky-Winter, Y. Loya, O. Hoegh-Guldberg, M. Fine

Genetics and Molecular Biology

Genetics and Molecular Biology
A Two-Component System Regulates the Expression of an ABC Transporter for Xylo-Oligosaccharides in Geobacillus stearothermophilus
Smadar Shulami, Galia Zaide, Gennady Zolotnitsky, Yael Langut, Geoff Feld, Abraham L. Sonenshein, Yuval Shoham
Genetics and Molecular Biology
Exopolysaccharide Expression in Lactococcus lactis subsp. cremoris Ropy352: Evidence for Novel Gene Organization
Eric P. Knoshaug, Jeff A. Ahlgren, Janine E. Trempy
Genetics and Molecular Biology
An Efficient Fungal RNA-Silencing System Using the DsRed Reporter Gene
Danielle Janus, Birgit Hoff, Eckhard Hofmann, Ulrich Kück

Plant Microbiology

Plant Microbiology
Expression of a Novel Small Antimicrobial Protein from the Seeds of Motherwort (Leonurus japonicus) Confers Disease Resistance in Tobacco
Xingyong Yang, Yuehua Xiao, Xiaowen Wang, Yan Pei

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Table of Contents

Minireviews

Food Microbiology

Microbial Ecology

Public Health Microbiology

Methods

Physiology and Biotechnology

Mycology

Evolutionary and Genomic Microbiology

Invertebrate Microbiology

Genetics and Molecular Biology

Plant Microbiology

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