Applied and Environmental Microbiology: 75 (22)

November 15, 2009; Volume 75,Issue 22

Public Health Microbiology

Public Health Microbiology
Pathotype and Antibiotic Resistance Gene Distributions of Escherichia coli Isolates from Broiler Chickens Raised on Antimicrobial-Supplemented Diets
Claudie Bonnet, Fatoumata Diarrassouba, Roland Brousseau, Luke Masson, Edward Topp, Moussa S. Diarra
Public Health Microbiology
Molecular Characterization of Bacteriophages for Microbial Source Tracking in Korea
Jung Eun Lee, Mi Young Lim, Sei Yoon Kim, Sunghee Lee, Heetae Lee, Hyun-Myung Oh, Hor-Gil Hur, GwangPyo Ko
Public Health Microbiology
Longitudinal Characterization of Resistant Escherichia coli in Fecal Deposits from Cattle Fed Subtherapeutic Levels of Antimicrobials
T. W. Alexander, T. Reuter, R. Sharma, L. J. Yanke, E. Topp, T. A. McAllister
Public Health Microbiology
Pepper Mild Mottle Virus as an Indicator of Fecal Pollution
Karyna Rosario, Erin M. Symonds, Christopher Sinigalliano, Jill Stewart, Mya Breitbart
Public Health Microbiology
Occurrence of Putative Pathogenicity Islands in Enterococci from Distinct Species and of Differing Origins
Teresa Semedo-Lemsaddek, Maria Teresa Barreto-Crespo, Rogério Tenreiro
Public Health Microbiology
Comparison of Point-of-Use Technologies for Emergency Disinfection of Sewage-Contaminated Drinking Water
S. Devin McLennan, Lauren A. Peterson, Joan B. Rose

Food Microbiology

Food Microbiology
Quantification of the Relative Effects of Temperature, pH, and Water Activity on Inactivation of Escherichia coli in Fermented Meat by Meta-Analysis
Olivia J. McQuestin, Craig T. Shadbolt, Tom Ross
Food Microbiology
Complex Phenotypic and Genotypic Responses of Listeria monocytogenes Strains Exposed to the Class IIa Bacteriocin Sakacin P
Girum Tadesse Tessema, Trond Møretrø, Achim Kohler, Lars Axelsson, Kristine Naterstad
Food Microbiology
Analysis of the Variability in the Number of Viable Bacteria after Mild Heat Treatment of Food
J. S. Aguirre, C. Pin, M. R. Rodríguez, G. D. García de Fernando
Food Microbiology
Development of a Log-Quadratic Model To Describe Microbial Inactivation, Illustrated by Thermal Inactivation of Clostridium botulinum
G. Stone, B. Chapman, D. Lovell
Food Microbiology
Design of an Experimental Viscoelastic Food Model System for Studying Zygosaccharomyces bailii Spoilage in Acidic Sauces
L. Mertens, A. H. Geeraerd, T. D. T. Dang, A. Vermeulen, K. Serneels, E. Van Derlinden, A. M. Cappuyns, P. Moldenaers, J. Debevere, F. Devlieghere, J. F. Van Impe
Food Microbiology
Listeria monocytogenes Attachment to and Detachment from Stainless Steel Surfaces in a Simulated Dairy Processing Environment
Sofia Poimenidou, Charalambia A. Belessi, Efstathios D. Giaouris, Antonia S. Gounadaki, George-John E. Nychas, Panagiotis N. Skandamis

Methods

Methods
Quadruplex Real-Time PCR Assay for Detection and Identification of Vibrio cholerae O1 and O139 Strains and Determination of Their Toxigenic Potential
Jianwei Huang, Yumei Zhu, Huixin Wen, Jiafeng Zhang, Shijie Huang, Jianjun Niu, Qingge Li
Methods
Identification and Classification of bcl Genes and Proteins of Bacillus cereus Group Organisms and Their Application in Bacillus anthracis Detection and Fingerprinting
Tomasz A. Leski, Clayton C. Caswell, Marcin Pawlowski, David J. Klinke, Janusz M. Bujnicki, Sean J. Hart, Slawomir Lukomski
Methods
Identification of Bacillus anthracis by Using Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry and Artificial Neural Networks
Peter Lasch, Wolfgang Beyer, Herbert Nattermann, Maren Stämmler, Enrico Siegbrecht, Roland Grunow, Dieter Naumann
Methods
Accurate Quantification of Microorganisms in PCR-Inhibiting Environmental DNA Extracts by a Novel Internal Amplification Control Approach Using Biotrove OpenArrays
R. van Doorn, M. M. Klerks, M. P. E. van Gent-Pelzer, A. G. C. L. Speksnijder, G. A. Kowalchuk, C. D. Schoen
Methods
Statistical Assessment of Variability of Terminal Restriction Fragment Length Polymorphism Analysis Applied to Complex Microbial Communities
Pierre Rossi, François Gillet, Emmanuelle Rohrbach, Nouhou Diaby, Christof Holliger

Enzymology and Protein Engineering

Enzymology and Protein Engineering
Thermostable Cyanuric Acid Hydrolase from Moorella thermoacetica ATCC 39073
Qingyan Li, Jennifer L. Seffernick, Michael J. Sadowsky, Lawrence P. Wackett
Enzymology and Protein Engineering
Gene Cloning, Protein Characterization, and Alteration of Product Selectivity for the Trehalulose Hydrolase and Trehalulose Synthase from “Pseudomonas mesoacidophila” MX-45
Hildegard Watzlawick, Ralf Mattes
Enzymology and Protein Engineering
Novel GH10 Xylanase, with a Fibronectin Type 3 Domain, from Cellulosimicrobium sp. Strain HY-13, a Bacterium in the Gut of Eisenia fetida
Do Young Kim, Mi Kyoung Han, Doo-Sang Park, Jong Suk Lee, Hyun-Woo Oh, Dong-Ha Shin, Tae-Sook Jeong, Sung Uk Kim, Kyung Sook Bae, Kwang-Hee Son, Ho-Yong Park

Microbial Ecology

Microbial Ecology
Effect of Carbohydrate Composition in Barley and Oat Cultivars on Microbial Ecophysiology and Proliferation of Salmonella enterica in an In Vitro Model of the Porcine Gastrointestinal Tract
Robert Pieper, Jérôme Bindelle, Brian Rossnagel, Andrew Van Kessel, Pascal Leterme
Microbial Ecology
Low Taxon Richness of Bacterioplankton in High-Altitude Lakes of the Eastern Tibetan Plateau, with a Predominance of Bacteroidetes and Synechococcus spp.
Peng Xing, Martin W. Hahn, Qinglong L. Wu
Microbial Ecology
Microbial Populations Responsive to Denitrification-Inducing Conditions in Rice Paddy Soil, as Revealed by Comparative 16S rRNA Gene Analysis
Satoshi Ishii, Michihiro Yamamoto, Mami Kikuchi, Kenshiro Oshima, Masahira Hattori, Shigeto Otsuka, Keishi Senoo
Microbial Ecology
Prokaryotic Community Structure and Sulfate Reducer Activity in Water from High-Temperature Oil Reservoirs with and without Nitrate Treatment
Antje Gittel, Ketil Bernt Sørensen, Torben Lund Skovhus, Kjeld Ingvorsen, Andreas Schramm
Microbial Ecology
Rumen Microbiome Composition Determined Using Two Nutritional Models of Subacute Ruminal Acidosis
Ehsan Khafipour, Shucong Li, Jan C. Plaizier, Denis O. Krause
Microbial Ecology
Molecular Characterization of Potential Nitrogen Fixation by Anaerobic Methane-Oxidizing Archaea in the Methane Seep Sediments at the Number 8 Kumano Knoll in the Kumano Basin, Offshore of Japan
Junichi Miyazaki, Ryosaku Higa, Tomohiro Toki, Juichiro Ashi, Urumu Tsunogai, Takuro Nunoura, Hiroyuki Imachi, Ken Takai
Microbial Ecology
Comparison of Bacterioneuston and Bacterioplankton Dynamics during a Phytoplankton Bloom in a Fjord Mesocosm
Michael Cunliffe, Andrew S. Whiteley, Lindsay Newbold, Anna Oliver, Hendrik Schäfer, J. Colin Murrell
Microbial Ecology
Bacterial Community Composition of Stream Biofilms in Spatially Variable-Flow Environments
Katharina Besemer, Gabriel Singer, Iris Hödl, Tom J. Battin
Microbial Ecology
High Ratio of Bacteriochlorophyll Biosynthesis Genes to Chlorophyll Biosynthesis Genes in Bacteria of Humic Lakes
Alexander Eiler, Sara Beier, Christin Säwström, Jan Karlsson, Stefan Bertilsson
Microbial Ecology
Dominant Bacteria and Biomass in the Kuytun 51 Glacier
Shu-Rong Xiang, Tian-Cui Shang, Yong Chen, Ze-Fan Jing, Tandong Yao
Microbial Ecology
Bacteria, Archaea, and Crenarchaeota in the Epilimnion and Hypolimnion of a Deep Holo-Oligomictic Lake
Cristiana Callieri, Gianluca Corno, Emanuele Caravati, Serena Rasconi, Mario Contesini, Roberto Bertoni

Physiology

Physiology
Role of the Streptococcus mutans irvA Gene in GbpC-Independent, Dextran-Dependent Aggregation and Biofilm Formation
Min Zhu, Dragana Ajdić, Yuan Liu, David Lynch, Justin Merritt, Jeffrey A. Banas
Physiology
Acyl-Homoserine Lactones Can Induce Virus Production in Lysogenic Bacteria: an Alternative Paradigm for Prophage Induction
Dhritiman Ghosh, Krishnakali Roy, Kurt E. Williamson, Sharath Srinivasiah, K. Eric Wommack, Mark Radosevich

Mycology

Mycology
ATP-Dependent but Proton Gradient-Independent Polyphosphate-Synthesizing Activity in Extraradical Hyphae of an Arbuscular Mycorrhizal Fungus
Chiharu Tani, Ryo Ohtomo, Mitsuru Osaki, Yukari Kuga, Tatsuhiro Ezawa
Mycology
Calcium Oxalate Biomineralization by Piloderma fallax in Response to Various Levels of Calcium and Phosphorus
Melissa Marie S. Tuason, Joselito M. Arocena
Mycology
Establishing Molecular Tools for Genetic Manipulation of the Pleuromutilin-Producing Fungus Clitopilus passeckerianus
Sreedhar Kilaru, Catherine M. Collins, Amanda J. Hartley, Andy M. Bailey, Gary D. Foster

Invertebrate Microbiology

Invertebrate Microbiology
Molecular Identification and Hidden Diversity of Novel Daphnia Parasites from European Lakes
Justyna Wolinska, Sabine Giessler, Henrike Koerner
Invertebrate Microbiology
The Olive Fly Endosymbiont, “Candidatus Erwinia dacicola,” Switches from an Intracellular Existence to an Extracellular Existence during Host Insect Development
Anne M. Estes, David J. Hearn, Judith L. Bronstein, Elizabeth A. Pierson
Invertebrate Microbiology
Deformed Wing Virus Implicated in Overwintering Honeybee Colony Losses
Andrea C. Highfield, Aliya El Nagar, Luke C. M. Mackinder, Laure M.-L. J. Noël, Matthew J. Hall, Stephen J. Martin, Declan C. Schroeder
Invertebrate Microbiology
Population Structure of the Lyme Borreliosis Spirochete Borrelia burgdorferi in the Western Black-Legged Tick (Ixodes pacificus) in Northern California
Yvette A. Girard, Bridgit Travinsky, Anna Schotthoefer, Natalia Fedorova, Rebecca J. Eisen, Lars Eisen, Alan G. Barbour, Robert S. Lane
Invertebrate Microbiology
Cadherin Fragments from Anopheles gambiae Synergize Bacillus thuringiensis Cry4Ba's Toxicity against Aedes aegypti Larvae
Youngjin Park, Gang Hua, Mohd Amir F. Abdullah, Khalidur Rahman, Michael J. Adang
Invertebrate Microbiology
Impact of Host Developmental Age on the Transcriptome of the Symbiotic Bacterium Buchnera aphidicola in the Pea Aphid (Acyrthosiphon pisum)
John Bermingham, Andréane Rabatel, Federica Calevro, José Viñuelas, Gérard Febvay, Hubert Charles, Angela Douglas, Tom Wilkinson

Biotechnology

Biotechnology
Hydroxylation and Further Oxidation of Δ⁹-Tetrahydrocannabinol by Alkane-Degrading Bacteria
Hassan Rashidi, Muhammad T. Akhtar, Frank van der Kooy, Robert Verpoorte, Wouter A. Duetz
Biotechnology
Metabolic Engineering of Saccharomyces cerevisiae for Astaxanthin Production and Oxidative Stress Tolerance
Ken Ukibe, Keisuke Hashida, Nobuyuki Yoshida, Hiroshi Takagi
Biotechnology
Improved Squalene Production via Modulation of the Methylerythritol 4-Phosphate Pathway and Heterologous Expression of Genes from Streptomyces peucetius ATCC 27952 in Escherichia coli
Gopal Prasad Ghimire, Hei Chan Lee, Jae Kyung Sohng

Author's Correction

AUTHOR'S CORRECTION | AUTHOR'S CORRECTIONS
Cloning of a Novel Pyrethroid-Hydrolyzing Carboxylesterase Gene from Sphingobium sp. Strain JZ-1 and Characterization of the Gene Product
Bao-zhan Wang, Peng Guo, Bao-jian Hang, Lian Li, Jian He, Shun-peng Li

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Table of Contents

Public Health Microbiology

Food Microbiology

Methods

Enzymology and Protein Engineering

Microbial Ecology

Physiology

Mycology

Invertebrate Microbiology

Biotechnology

Author's Correction

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