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Methods

Broad-Host-Range Plasmids for Red Fluorescent Protein Labeling of Gram-Negative Bacteria for Use in the Zebrafish Model System

John T. Singer, Ryan T. Phennicie, Matthew J. Sullivan, Laura A. Porter, Valerie J. Shaffer, Carol H. Kim
John T. Singer
1Department of Molecular and Biomedical Sciences, 5735 Hitchner Hall, University of Maine, Orono, Maine 04469
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  • For correspondence: jsinger@maine.edu
Ryan T. Phennicie
1Department of Molecular and Biomedical Sciences, 5735 Hitchner Hall, University of Maine, Orono, Maine 04469
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Matthew J. Sullivan
1Department of Molecular and Biomedical Sciences, 5735 Hitchner Hall, University of Maine, Orono, Maine 04469
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Laura A. Porter
1Department of Molecular and Biomedical Sciences, 5735 Hitchner Hall, University of Maine, Orono, Maine 04469
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Valerie J. Shaffer
1Department of Molecular and Biomedical Sciences, 5735 Hitchner Hall, University of Maine, Orono, Maine 04469
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Carol H. Kim
1Department of Molecular and Biomedical Sciences, 5735 Hitchner Hall, University of Maine, Orono, Maine 04469
2Graduate School for Biomedical Sciences, ESRB/Barrows Hall, University of Maine, Orono, Maine 04469
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DOI: 10.1128/AEM.01679-09
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  • FIG. 1.
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    FIG. 1.

    General structure of pigment-coding regions in pRSETB plasmids carrying d-Tomato, td-Tomato, m-Orange, and m-Cherry DNAs. All pigment DNAs were carried on XbaI-HindIII fragments, and structural pigment sequences could be isolated only on smaller BamHI-HindIII fragments. Sequences upstream of the ATG start site for pigment production contained a ribosome binding site, 6-His codons, and a 62-bp region encoding an antigenic epitope for immunological detection (25).

  • FIG. 2.
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    FIG. 2.

    E. coli HB101 strains carrying IPTG-inducible pMMB66EH derivatives expressing RFPs. Strains were streaked on L agar plates containing ampicillin. The plate on the right contained 0.4 mM IPTG. Plasmids carried by each strain are the following (clockwise from the top): p66MC1 (m-Cherry), p66M1 (m-Orange), p66TD1 (td-Tomato), and p66T1 (d-Tomato).

  • FIG. 3.
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    FIG. 3.

    P. aeruginosa PA01(p66TDC1) and PA14(p66TDC1) strains carrying a constitutive variant of p66TD1. Strains were streaked on L agar plates containing ampicillin only. The plate on the left shows pigment production by PA01(p66TDC1), and that on the right shows pigment production by PA14(p66TDC1).

  • FIG. 4.
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    FIG. 4.

    DNA sequence of lacIq carried by plasmids pMMB66EH and p66TDC1. A 1,220-bp region containing the lacI genes of pMMB66EH and p66TDC1 was subjected to automated DNA sequencing. A portion of the sequence from nucleotide (nt) 724 to 771 is shown above. Numbers above the sequence denote nucleotide positions. Letters above and below the sequences indicate amino acid assignments. Single-base-pair substitutions are indicated by an asterisk. The 2-bp insertion at nt 742 in p66TDC1 lacI is underlined.

  • FIG. 5.
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    FIG. 5.

    E. coli HB101 (lacI+) and P. aeruginosa PA14 (lacI−) carrying constitutive p67 derivatives expressing RFPs. Strains were streaked on L agar plates containing ampicillin. E. coli HB101 is on the left and P. aeruginosa PA14 is on the right. Plasmids carried by each strain are the following (clockwise from the top): p67MC1 (m-Cherry), p67M1 (m-Orange), p67TD1 (td-Tomato), and p67T1 (d-Tomato).

  • FIG. 6.
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    FIG. 6.

    Infection of zebrafish embryos (48 hpf) with P. aeruginosa PA14(p67T1) encoding d-Tomato. Embryos were microinjected with 50 CFU of P. aeruginosa PA14(p67T1) through the duct of Cuvier and imaged at 6 hpi. (A) Image analysis using an Olympus IX-81 inverted epifluorescence microscope equipped with a Hammatsu ORCA-ER CCD camera and IPLab software. Red fluorescence was observable at ×40 magnification (shown) or higher. Punctate fluorescence was observed in many tissues, including the vasculature, the yolk, and the pericardial sac. The image is an overlay of wide-field differential interference contrast (DIC) and fluorescence images. (B and C) Image analysis using an Olympus IX-81 and FV-1000 laser-scanning confocal microscope with Olympus FV-10 software. (B) Tg(fli1::EGFP) zebrafish express EGFP in macrophages (15) and were observed to contain phagocytosed P. aeruginosa PA14(p67T1) encoding d-Tomato. Three green fluorescent macrophages along the peripheral yolk are shown in association at ×1,000 magnification, with one containing RFP-labeled P. aeruginosa PA14(p67T1). (C) Tg(mpo::GFP) zebrafish express GFP in neutrophils (22) and were observed containing phagocytosed P. aeruginosa PA14(p67T1) encoding d-Tomato. The figure is at ×1,000 magnification. Filters providing excitation/emission at 543 nm/610 nm and 488 nm/510 nm were used for the detection of RFP and EGFP, respectively.

Tables

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  • TABLE 1.

    Bacterial strains and plasmids

    NameRelevant characteristic(s)Source or reference(s)
    Bacterial strains
        Escherichia coli HB101Rifs; cloning host and conjugal donor 3
        Edwardsiella tardaAp MIC, <100 μg/ml 21
        Edwardsiella tarda ETR1Spontaneous Rifr mutant of E. tarda, conjugal recipient for RFP plasmidsThis work
        Pseudomonas aeruginosa PA01Ap MIC, 1,050 μg/mlGeorge O'Toole, Dartmouth Medical School
        Pseudomonas aeruginosa PA01R1Spontaneous Rifr mutant of PAO1, conjugal recipient for RFP plasmidsThis work
        Pseudomonas aeruginosa PA14Ap MIC, 600 μg/ml; Rifr conjugal recipient for RFP plasmidsThis work
        Vibrio (Listonella) anguillarum 775(pJM1)Serotype O1 marine fish pathogen; Ap MIC, 200 μg/ml 7
        Vibrio (Listonella) anguillarum 775R1(pJM1)Spontaneous Rifr mutant of 775(pJM1), conjugal recipient for RFP plasmids 26
        Vibrio (Listonella) anguillarum H775-3pJM1-cured derivative of 775(pJM1) 6
        Vibrio (Listonella) anguillarum H775-3R1Spontaneous Rifr mutant of H775-3, conjugal recipient for RFP plasmids 26
        Vibrio (Listonella) anguillarum NVI5812Serotype O2β cod pathogen; Ap MIC, 400 μg/mlUna McCarthy, University of Maine
        Vibrio (Listonella) anguillarum NVI5812R1Spontaneous Rifr mutant of NVI5812, conjugal recipient for RFP plasmidsThis work
    Plasmids
        pMMB66EH8.8-kb Apr moderate-copy IncQ-based vector, mobilizable, lacIq+, IPTG-inducible ptac 1, 12
        pUC4-KSource of 1.5-kb BamHI kan DNA fragment 31
        p66-Km1Carries 1.5-kb BamHI kan fragment from pUC4-K cloned into pMMB66EH; Apr Kmr, lacIq+This work
        pRK201320-kb Kmr ColE1-based restricted-host-range helper plasmid, mobilizes pMMB66EH derivatives 9, 11
        pRSETB d-TomatoSource of 852-bp XbaI-HindIII d-Tomato DNA 25
        pRSETB td-TomatoSource of 1,578-bp XbaI-HindIII td-Tomato DNA 25
        pRSETB m-OrangeSource of 858-bp XbaI-HindIII m-Orange DNA 25
        pRSETB m-CherrySource of 848-bp XbaI-HindIII m-Cherry DNA 25
        p66T1pMMB66EH-based d-Tomato construct; Apr; encodes IPTG-inducible pigment productionThis work
        p66TD1pMMB66EH-based td-Tomato construct; Apr; encodes IPTG-inducible pigment productionThis work
        p66M1pMMB66EH-based m-Orange construct; Apr; encodes IPTG-inducible pigment productionThis work
        p66MC1pMMB66EH-based m-Cherry construct, Apr; encodes IPTG-inducible pigment productionThis work
        p66TDC1pMMB66EH-based td-Tomato construct; Apr; carries spontaneous lacI mutations resulting in constitutive pigment productionThis work
        p67T1p66TDC1 BamHI-HindIII lacI− vector fragment carrying 718-bp BamHI-HindIII d-Tomato DNA; Apr; constitutive pigment productionThis work
        p67TD1Like p67T1, but carrying 1,444-bp BamHI-HindIII td-Tomato DNAThis work
        p67M1Like p67T1, but carrying 724-bp BamHI-HindIII m-Orange DNAThis work
        p67MC1Like p67T1, but carrying 714-bp BamHI-HindIII m-Cherry DNAThis work
  • TABLE 2.

    Complementation of d-Tomato pigment production directed by p66TDC1

    StrainPigment
    −IPTG+IPTG
    HB101(p66T1)ColorlessPink
    HB101(p66T1, p66-kan)ColorlessLight pink
    HB101(p66TDC1)PinkDeep pink
    HB101(p66TDC1, p66-kan)ColorlessPink
  • TABLE 3.

    Stability of RFP-expressing plasmids under nonselective conditions

    Host strainPlasmid loss (%) from overnight cultures
    p66T1p66TD1p67T1p67M1p67MC1
    EtR11049250
    PA14597191510
    775R101113
    NVI5812R152622
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Broad-Host-Range Plasmids for Red Fluorescent Protein Labeling of Gram-Negative Bacteria for Use in the Zebrafish Model System
John T. Singer, Ryan T. Phennicie, Matthew J. Sullivan, Laura A. Porter, Valerie J. Shaffer, Carol H. Kim
Applied and Environmental Microbiology May 2010, 76 (11) 3467-3474; DOI: 10.1128/AEM.01679-09

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Broad-Host-Range Plasmids for Red Fluorescent Protein Labeling of Gram-Negative Bacteria for Use in the Zebrafish Model System
John T. Singer, Ryan T. Phennicie, Matthew J. Sullivan, Laura A. Porter, Valerie J. Shaffer, Carol H. Kim
Applied and Environmental Microbiology May 2010, 76 (11) 3467-3474; DOI: 10.1128/AEM.01679-09
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KEYWORDS

Gram-negative bacteria
host-pathogen interactions
Luminescent Proteins
molecular biology
plasmids
Staining and Labeling

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