Article Figures & Data
Figures
- FIG. 1.
PCoA of 60 unique C. parvum and C. hominis MLGs. GP60 alleles are colored according to species: white, C. parvum; black, C. hominis. Symbols represent alleles as indicated in the embedded legend. The C. hominis MLG with a IIc allele is shown with a black star and an asterisk in the legend. PCoA is based on SSR genetic distance (left) and Hamming distance (right). The percentages variation explained by the 1st and 2nd axes are indicated.
- FIG. 2.
C. hominis PCoA. The symbols represent different GP60 genotypes, as shown in the symbol legend. PCoA is based on SSR genetic distance (left) and Hamming distance (right). Note the overlapping distribution of MLGs with different GP60 genotypes. See the legend to Fig. 1 for additional details.
- FIG. 3.
C. parvum PCoA. As in Fig. 1 and 2, PCoA is based on SSR genetic distance (left) and Hamming distance (right). Note the tight cluster of MLGs with the IIc GP60 allele but no apparent segregation of other MLGs. See the legend to Fig. 1 for details.
- FIG. 4.
Pairwise linkage analysis. Pairs of markers in LD are represented with white squares and +. Linkage equilibrium is indicated with a shaded field and −. Column totals in the bottom row show for each marker the number of markers in linkage equilibrium. The chromosome location of each marker is shown at the top. Two pairs of markers are located on chromosome I and VI. The distance between MSA and MSB is more than 400,000 bp and between MSG and GP60 is over 140,000 bp. Left, C. parvum excluding IIc MLGs (n = 22); right, C. hominis (n = 30).
Tables
- TABLE 1.
C. parvum and C. hominis isolates
Isolatea Species GP60 allele MLGb Referencec UG996 C. hominis Ia 7 29 UG1481 C. hominis Ia 16 29 UG285 C. hominis Ia 57 29 UG94 C. hominis Ia 76 29 UK3004ft C. hominis Ia 78 29 UK3334ft C. hominis Ia 79 29 UK3555ft C. hominis Ia 80 29 UK3351 C. hominis Ia 81 29 UGTU502 C. hominis Ia 52 29 UK3000 C. hominis Ib 22 29 UK2696 C. hominis Ib 23 29 UK3812 C. hominis Ib 24 29 UK4498 C. hominis Ib 27 29 UK3871 C. hominis Ib 30 29 UK4691 C. hominis Ib 25 29 UK4733 C. hominis Ib 33 29 UK4771 C. hominis Ib 26 29 UK11766 C. hominis Ib 1 29 USNEMC1 C. hominis Ib 52 26 US9897 C. hominis Ib 73 26 USECHIV C. hominis Ib 75 Unpublished UG918 C. hominis Ie 5 29 UG1467 C. hominis Ie 6 29 UK5139 C. hominis Ie 32 29 USTU728 C. hominis Ie 19 Unpublished UK4938 C. hominis If 37 29 UK4776 C. hominis If 36 29 UK3010 C. hominis Ig 3 29 UK3957 C. hominis Ig 2 29 UG26 C. hominis IIc 43 29 TR13 C. parvum IIa 21 30 IL-7 C. parvum IIa 32 30 TR39 C. parvum IIa 36 30 IL-3 C. parvum IIa 44 30 IL-8 C. parvum IIa 47 30 IL-13 C. parvum IIa 49 30 IL-15 C. parvum IIa 51 30 IL-1 C. parvum IIa 37 30 NZHhu1 C. parvum IIa 40 29 NZHhu6 C. parvum IIa 41 29 NZHbo2 C. parvum IIa 42 29 SRB6 C. parvum IIa 56 29 SRB80 C. parvum IIa 58 29 SRB112 C. parvum IIa 64 29 USiowa C. parvum IIa 50 1 UKMD C. parvum IIa 39 6 UG1224 C. parvum IIc 1 29 UG2428 C. parvum IIc 7 29 UG30 C. parvum IIc 13 29 UG2553 C. parvum IIc 18 29 UG1504 C. parvum IIc 54 29 UGtu114 C. parvum IIc 2 29 UG1601 C. parvum IIc 15 29 UG9 C. parvum IIc 8 29 SRB42 C. parvum IId 66 29 UG1862 C. parvum IIe 25 29 UG216 C. parvum IIi 23 29 UGtu154 C. parvum IIi 22 29 SRB24 C. parvum IIj 68 29 SRB58 C. parvum IIj 74 29 ↵ a The first 2 or 3 letters indicate the country of origin: IL, Israel; NZ, New Zealand; SRB, Serbia; UG, Uganda; UK, United Kingdom; US, United States; TR, Turkey. ft, sample originated from person reporting recent travel outside the United Kingdom.
↵ b Arbitrary code assigned to 9-locus MLG; see report by Tanriverdi et al. (29) for actual MLG.
↵ c Except for isolates from the United States, all isolates were described by Tanriverdi et al. (29), where the host and geographical origin are described in more detail. The references shown here indicate where the isolate was first described.
