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Table of Contents

March 15, 2013; Volume 79,Issue 6

Spotlight

  • Free
    Spotlight
    Articles of Significant Interest Selected from This Issue by the Editors

Biodegradation

  • Biodegradation
    The Human Fecal Microbiota Metabolizes Deoxynivalenol and Deoxynivalenol-3-Glucoside and May Be Responsible for Urinary Deepoxy-Deoxynivalenol
    Silvia W. Gratz, Gary Duncan, Anthony J. Richardson

Biotechnology

  • Biotechnology
    Efficient Production of Active Polyhydroxyalkanoate Synthase in Escherichia coli by Coexpression of Molecular Chaperones
    Nicholas M. Thomson, Azusa Saika, Kazunori Ushimaru, Smith Sangiambut, Takeharu Tsuge, David K. Summers, Easan Sivaniah
  • Biotechnology
    Development of a Continuous Bioconversion System Using a Thermophilic Whole-Cell Biocatalyst
    Pham Huynh Ninh, Kohsuke Honda, Yukako Yokohigashi, Kenji Okano, Takeshi Omasa, Hisao Ohtake
  • Biotechnology
    CO-Dependent H2 Production by Genetically Engineered Thermococcus onnurineus NA1
    Min-Sik Kim, Seung Seob Bae, Yun Jae Kim, Tae Wan Kim, Jae Kyu Lim, Seong Hyuk Lee, Ae Ran Choi, Jeong Ho Jeon, Jung-Hyun Lee, Hyun Sook Lee, Sung Gyun Kang

Environmental Microbiology

  • Environmental Microbiology
    GacS-Dependent Regulation of Polyhydroxyalkanoate Synthesis in Pseudomonas putida CA-3
    William J. Ryan, Niall D. O'Leary, Mark O'Mahony, Alan D. W. Dobson
  • Environmental Microbiology
    Hydrologic and Vegetative Removal of Cryptosporidium parvum, Giardia lamblia, and Toxoplasma gondii Surrogate Microspheres in Coastal Wetlands
    Jennifer N. Hogan, Miles E. Daniels, Fred G. Watson, Stori C. Oates, Melissa A. Miller, Patricia A. Conrad, Karen Shapiro, Dane Hardin, Clare Dominik, Ann Melli, David A. Jessup, Woutrina A. Miller
  • Open Access
    Environmental Microbiology
    New Type of Outer Membrane Vesicle Produced by the Gram-Negative Bacterium Shewanella vesiculosa M7T: Implications for DNA Content
    Carla P�rez-Cruz, Ornella Carri�n, Lidia Delgado, Gemma Martinez, Carmen L�pez-Iglesias, Elena Mercade
  • Environmental Microbiology
    Characterization of the Denitrification-Associated Phosphorus Uptake Properties of “Candidatus Accumulibacter phosphatis” Clades in Sludge Subjected to Enhanced Biological Phosphorus Removal
    Jeong Myeong Kim, Hyo Jung Lee, Dae Sung Lee, Che Ok Jeon
  • Environmental Microbiology
    RubisCO Gene Clusters Found in a Metagenome Microarray from Acid Mine Drainage
    Xue Guo, Huaqun Yin, Jing Cong, Zhimin Dai, Yili Liang, Xueduan Liu

Enzymology and Protein Engineering

  • Enzymology and Protein Engineering
    Distinct Actions by Paenibacillus sp. Strain E18 α-l-Arabinofuranosidases and Xylanase in Xylan Degradation
    Pengjun Shi, Xiaoyan Chen, Kun Meng, Huoqing Huang, Yingguo Bai, Huiying Luo, Peilong Yang, Bin Yao

Evolutionary and Genomic Microbiology

  • Evolutionary and Genomic Microbiology
    Phylogenetic Inferences Reveal a Large Extent of Novel Biodiversity in Chemically Rich Tropical Marine Cyanobacteria
    Niclas Engene, Sarath P. Gunasekera, William H. Gerwick, Valerie J. Paul

Food Microbiology

  • Food Microbiology
    Salmonella and Escherichia coli O157:H7 Survival in Soil and Translocation into Leeks (Allium porrum) as Influenced by an Arbuscular Mycorrhizal Fungus (Glomus intraradices)
    Joshua B. Gurtler, David D. Douds, Brian P. Dirks, Jennifer J. Quinlan, April M. Nicholson, John G. Phillips, Brendan A. Niemira
  • Food Microbiology
    Isolation of a Bifidogenic Peptide from the Pepsin Hydrolysate of Bovine Lactoferrin
    Hirotsugu Oda, Hiroyuki Wakabayashi, Koji Yamauchi, Takumi Sato, Jin-Zhong Xiao, Fumiaki Abe, Keiji Iwatsuki
  • Food Microbiology
    Antifungal Hydroxy Fatty Acids Produced during Sourdough Fermentation: Microbial and Enzymatic Pathways, and Antifungal Activity in Bread
    Brenna A. Black, Emanuele Zannini, Jonathan M. Curtis, Michael G. G�nzle
  • Food Microbiology
    Examination of Food Chain-Derived Listeria monocytogenes Strains of Different Serotypes Reveals Considerable Diversity in inlA Genotypes, Mutability, and Adaptation to Cold Temperatures
    Jovana Kovacevic, Carolina Arguedas-Villa, Anna Wozniak, Taurai Tasara, Kevin J. Allen
  • Food Microbiology
    Comparative Genomic and Functional Analysis of Lactobacillus casei and Lactobacillus rhamnosus Strains Marketed as Probiotics
    Fran�ois P. Douillard, Angela Ribbera, Hanna M. J�rvinen, Ravi Kant, Taija E. Pietil�, Cinzia Randazzo, Lars Paulin, Pia K. Laine, Cinzia Caggia, Ingemar von Ossowski, Justus Reunanen, Reetta Satokari, Seppo Salminen, Airi Palva, Willem M. de Vos
  • Food Microbiology
    Identification and Characterization of Spontaneous Deletions within the Sp11-Sp12 Prophage Region of Escherichia coli O157:H7 Sakai
    Chun Chen, Carrie R. Lewis, Kakolie Goswami, Elisabeth L. Roberts, Chitrita DebRoy, Edward G. Dudley
  • Food Microbiology
    wksl3, a New Biocontrol Agent for Salmonella enterica Serovars Enteritidis and Typhimurium in Foods: Characterization, Application, Sequence Analysis, and Oral Acute Toxicity Study
    Hyun-Wol Kang, Jae-Won Kim, Tae-Sung Jung, Gun-Jo Woo
  • Food Microbiology
    Catabolism of N-Acetylneuraminic Acid, a Fitness Function of the Food-Borne Lactic Acid Bacterium Lactobacillus sakei, Involves Two Newly Characterized Proteins
    Jamila Anba-Mondoloni, St�phane Chaillou, Monique Zagorec, Marie-Christine Champomier-Verg�s
  • Food Microbiology
    Selection for Loss of RpoS in Cronobacter sakazakii by Growth in the Presence of Acetate as a Carbon Source
    Avelino �lvarez-Ord��ez, M�ire Begley, Colin Hill
  • Food Microbiology
    In Situ Determination of Clostridium Endospore Membrane Fluidity during Pressure-Assisted Thermal Processing in Combination with Nisin or Reutericyclin
    S. Hofstetter, R. Winter, L. M. McMullen, M. G. G�nzle

Genetics and Molecular Biology

  • Genetics and Molecular Biology
    The Iron-Dependent Regulator Fur Controls Pheromone Signaling Systems and Luminescence in the Squid Symbiont Vibrio fischeri ES114
    Alecia N. Septer, Noreen L. Lyell, Eric V. Stabb
  • Genetics and Molecular Biology
    Chemoreceptor VfcA Mediates Amino Acid Chemotaxis in Vibrio fischeri
    Caitlin A. Brennan, Cindy R. DeLoney-Marino, Mark J. Mandel
  • Genetics and Molecular Biology
    Defining the Bacteroides Ribosomal Binding Site
    Udo Wegmann, Nikki Horn, Simon R. Carding
  • Genetics and Molecular Biology
    Dual Roles of Pseudomonas aeruginosa AlgE in Secretion of the Virulence Factor Alginate and Formation of the Secretion Complex
    Zahid U. Rehman, Bernd H. A. Rehm
  • Genetics and Molecular Biology
    Characterization of the Biosynthetic Genes for 10,11-Dehydrocurvularin, a Heat Shock Response-Modulating Anticancer Fungal Polyketide from Aspergillus terreus
    Yuquan Xu, Patricia Espinosa-Artiles, Vivien Schubert, Ya-ming Xu, Wei Zhang, Min Lin, A. A. Leslie Gunatilaka, Roderich S�ssmuth, Istv�n Moln�r
  • Genetics and Molecular Biology
    Arabinose Induces Pellicle Formation by Vibrio fischeri
    Karen L. Visick, Kevin P. Quirke, Sheila M. McEwen
  • Genetics and Molecular Biology
    Characterization of an Acid-Inducible Sulfatase in Salmonella enterica Serovar Typhimurium
    Seema Das, Swati Singh, Michael McClelland, Steven Forst, Prasad Gyaneshwar

Geomicrobiology

  • Geomicrobiology
    Carbon Isotope Fractionation of 11 Acetogenic Strains Grown on H2 and CO2
    Martin B. Blaser, Lisa K. Dreisbach, Ralf Conrad
  • Geomicrobiology
    Involvement of Intermediate Sulfur Species in Biological Reduction of Elemental Sulfur under Acidic, Hydrothermal Conditions
    Eric S. Boyd, Gregory K. Druschel

Invertebrate Microbiology

  • Invertebrate Microbiology
    Specificity between Lactobacilli and Hymenopteran Hosts Is the Exception Rather than the Rule
    Quinn S. McFrederick, Jamie J. Cannone, Robin R. Gutell, Katrin Kellner, Robert M. Plowes, Ulrich G. Mueller
  • Invertebrate Microbiology
    Efficient Colonization of the Bean Bug Riptortus pedestris by an Environmentally Transmitted Burkholderia Symbiont
    Yoshitomo Kikuchi, Isao Yumoto

Methods

  • Methods
    Monitoring the Single-Cell Stress Response of the Diatom Thalassiosira pseudonana by Quantitative Real-Time Reverse Transcription-PCR
    Xu Shi, Weimin Gao, Shih-hui Chao, Weiwen Zhang, Deirdre R. Meldrum

Microbial Ecology

  • Microbial Ecology
    Methanogens and Methanogenesis in the Rumens and Ceca of Lambs Fed Two Different High-Grain-Content Diets
    M. Popova, D. P. Morgavi, C. Martin
  • Microbial Ecology
    Influence of the Vaginal Microbiota on Toxic Shock Syndrome Toxin 1 Production by Staphylococcus aureus
    Roderick A. MacPhee, Wayne L. Miller, Gregory B. Gloor, John K. McCormick, Jo-Anne Hammond, Jeremy P. Burton, Gregor Reid
  • Microbial Ecology
    Wastewater Treatment Effluent Reduces the Abundance and Diversity of Benthic Bacterial Communities in Urban and Suburban Rivers
    Bradley Drury, Emma Rosi-Marshall, John J. Kelly
  • Open Access
    Microbial Ecology
    Carot-4-en-9,10-Diol, a Conidiation-Inducing Sesquiterpene Diol Produced by Trichoderma virens PS1-7 upon Exposure to Chemical Stress from Highly Active Iron Chelators
    Mengcen Wang, Makoto Hashimoto, Yasuyuki Hashidoko
  • Microbial Ecology
    Interactions of Nitrifying Bacteria and Heterotrophs: Identification of a Micavibrio-Like Putative Predator of Nitrospira spp.
    Jan Dolinšek, Ilias Lagkouvardos, Wolfgang Wanek, Michael Wagner, Holger Daims
  • Microbial Ecology
    Rates of Species Accumulation and Taxonomic Diversification during Phototrophic Biofilm Development Are Controlled by both Nutrient Supply and Current Velocity
    Chad A. Larson, Sophia I. Passy
  • Microbial Ecology
    Isolation of a Substantial Proportion of Forest Soil Bacterial Communities Detected via Pyrotag Sequencing
    David VanInsberghe, Martin Hartmann, Gordon R. Stewart, William W. Mohn

Physiology

  • Physiology
    Caffeate Respiration in the Acetogenic Bacterium Acetobacterium woodii: a Coenzyme A Loop Saves Energy for Caffeate Activation
    Verena Hess, Jos� M. Gonz�lez, Anutthaman Parthasarathy, Wolfgang Buckel, Volker M�ller

Plant Microbiology

  • Plant Microbiology
    Relevance of Fucose-Rich Extracellular Polysaccharides Produced by Rhizobium sullae Strains Nodulating Hedysarum coronarium L. Legumes
    Razika Gharzouli, Marie-Anne Carp�n�, Fran�ois Couderc, Ammar Benguedouar, V�r�na Poinsot
  • Plant Microbiology
    Directed Construction and Analysis of a Sinorhizobium meliloti pSymA Deletion Mutant Library
    Svetlana N. Yurgel, Michael W. Mortimer, Jennifer T. Rice, Jodi L. Humann, Michael L. Kahn

Public Health Microbiology

  • Public Health Microbiology
    Effects of Temperature and pH on Reduction of Bacteria in a Point-of-Use Drinking Water Treatment Product for Emergency Relief
    Jean-Thomas Marois-Fiset, Anne Carabin, Audrey Lavoie, Caetano C. Dorea

Erratum

  • Erratum
    Carriage and Fecal Counts of CTX-M-Producing Escherichia coli in Pigs: a Longitudinal Study
    Katrine Hartung Hansen, Peter Damborg, Margit Andreasen, S�ren Saxmose Nielsen, Luca Guardabassi

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    Masthead
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Applied and Environmental Microbiology: 79 (6)

In This Issue

volume 79, issue 6
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  • Community Structure of Arbuscular Mycorrhizal Fungi in Soils of Switchgrass Harvested for Bioenergy
  • Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation
  • Following Coffee Production from Cherries to Cup: Microbiological and Metabolomic Analysis of Wet Processing of Coffea arabica
  • Airborne Disinfection by Dry Fogging Efficiently Inactivates Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Mycobacteria, and Bacterial Spores and Shows Limitations of Commercial Spore Carriers
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