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Table of Contents

May 1, 2016; Volume 82,Issue 9

Spotlight

  • Free
    Spotlight
    Articles of Significant Interest Selected from This Issue by the Editors

Biodegradation

  • Biodegradation
    Functional Redundancy of Linuron Degradation in Microbial Communities in Agricultural Soil and Biopurification Systems
    Benjamin Horemans, Karolien Bers, Erick Ruiz Romero, Eva Pose Juan, Vincent Dunon, René De Mot, Dirk Springael

Biotechnology

  • Biotechnology
    Engineering Escherichia coli for Microbial Production of Butanone
    Kajan Srirangan, Xuejia Liu, Lamees Akawi, Mark Bruder, Murray Moo-Young, C. Perry Chou
  • Biotechnology
    A New Strategy for Production of 5-Aminolevulinic Acid in Recombinant Corynebacterium glutamicum with High Yield
    Peng Yang, Wenjing Liu, Xuelian Cheng, Jing Wang, Qian Wang, Qingsheng Qi

Environmental Microbiology

  • Environmental Microbiology | Spotlight
    Mechanisms of Bacterial (Serratia marcescens) Attachment to, Migration along, and Killing of Fungal Hyphae
    Tal Hover, Tal Maya, Sapir Ron, Hani Sandovsky, Yana Shadkchan, Nitzan Kijner, Yulia Mitiagin, Boris Fichtman, Amnon Harel, Robert M. Q. Shanks, Roberto E. Bruna, Eleonora García-Véscovi, Nir Osherov
  • Environmental Microbiology | Spotlight
    Evaluation of a Parchment Document, the 13th Century Incorporation Charter for the City of Krakow, Poland, for Microbial Hazards
    Tomasz Lech
  • Environmental Microbiology
    Dominant Tree Species and Soil Type Affect the Fungal Community Structure in a Boreal Peatland Forest
    Hui Sun, Eeva Terhonen, Andriy Kovalchuk, Hanna Tuovila, Hongxin Chen, Abbot O. Oghenekaro, Jussi Heinonsalo, Annegret Kohler, Risto Kasanen, Harri Vasander, Fred O. Asiegbu
  • Environmental Microbiology | Spotlight
    Packaging of Campylobacter jejuni into Multilamellar Bodies by the Ciliate Tetrahymena pyriformis
    Hana Trigui, Valérie E. Paquet, Steve J. Charette, Sébastien P. Faucher
  • Environmental Microbiology
    Diversity of Clinical and Environmental Isolates of Vibrio cholerae in Natural Transformation and Contact-Dependent Bacterial Killing Indicative of Type VI Secretion System Activity
    Eryn E. Bernardy, Maryann A. Turnsek, Sarah K. Wilson, Cheryl L. Tarr, Brian K. Hammer

Enzymology and Protein Engineering

  • Enzymology and Protein Engineering
    A Novel Glycoside Hydrolase Family 113 Endo-β-1,4-Mannanase from Alicyclobacillus sp. Strain A4 and Insight into the Substrate Recognition and Catalytic Mechanism of This Family
    Wei Xia, Haiqiang Lu, Mengjuan Xia, Ying Cui, Yingguo Bai, Lichun Qian, Pengjun Shi, Huiying Luo, Bin Yao

Evolutionary and Genomic Microbiology

  • Open Access
    Evolutionary and Genomic Microbiology
    Identifying Potential Mechanisms Enabling Acidophily in the Ammonia-Oxidizing Archaeon “Candidatus Nitrosotalea devanaterra”
    Laura E. Lehtovirta-Morley, Luis A. Sayavedra-Soto, Nicolas Gallois, Stefan Schouten, Lisa Y. Stein, James I. Prosser, Graeme W. Nicol

Food Microbiology

  • Open Access
    Food Microbiology
    Functional Analysis of an S-Layer-Associated Fibronectin-Binding Protein in Lactobacillus acidophilus NCFM
    Jeffrey P. Hymes, Brant R. Johnson, Rodolphe Barrangou, Todd R. Klaenhammer
  • Food Microbiology
    Relationship of Enhanced Butyrate Production by Colonic Butyrate-Producing Bacteria to Immunomodulatory Effects in Normal Mice Fed an Insoluble Fraction of Brassica rapa L.
    Sachi Tanaka, Kana Yamamoto, Kazuki Yamada, Kanon Furuya, Yutaka Uyeno
  • Food Microbiology
    Isolation and Structural Elucidation of Brevibacillin, an Antimicrobial Lipopeptide from Brevibacillus laterosporus That Combats Drug-Resistant Gram-Positive Bacteria
    Xu Yang, En Huang, Chunhua Yuan, Liwen Zhang, Ahmed E. Yousef
  • Food Microbiology
    Thermal Inactivation of Mycobacterium avium subsp. paratuberculosis in Artificially Contaminated Milk by Direct Steam Injection
    Mats Peterz, Sophie Butot, Balamurugan Jagadeesan, Douwe Bakker, John Donaghy

Genetics and Molecular Biology

  • Genetics and Molecular Biology | Spotlight
    Mutations in Novel Lipopolysaccharide Biogenesis Genes Confer Resistance to Amoebal Grazing in Synechococcus elongatus
    Ryan Simkovsky, Emily E. Effner, Maria José Iglesias-Sánchez, Susan S. Golden
  • Genetics and Molecular Biology
    Transcriptional Repression of the VC2105 Protein by Vibrio FadR Suggests that It Is a New Auxiliary Member of the fad Regulon
    Rongsui Gao, Jingxia Lin, Han Zhang, Youjun Feng

Geomicrobiology

  • Geomicrobiology
    Metagenomic Analyses of the Autotrophic Fe(II)-Oxidizing, Nitrate-Reducing Enrichment Culture KS
    Shaomei He, Claudia Tominski, Andreas Kappler, Sebastian Behrens, Eric E. Roden
  • Geomicrobiology
    Carbon Isotope Fractionation during Catabolism and Anabolism in Acetogenic Bacteria Growing on Different Substrates
    Christoph Freude, Martin Blaser

Invertebrate Microbiology

  • Invertebrate Microbiology | Spotlight
    A Tale of Transmission: Aeromonas veronii Activity within Leech-Exuded Mucus
    Brittany M. Ott, Andrew M. Dacks, Kenneth J. Ryan, Rita V. M. Rio

Methods

  • Methods
    Estimates of Soil Bacterial Ribosome Content and Diversity Are Significantly Affected by the Nucleic Acid Extraction Method Employed
    Pia K. Wüst, Heiko Nacke, Kristin Kaiser, Sven Marhan, Johannes Sikorski, Ellen Kandeler, Rolf Daniel, Jörg Overmann
  • Open Access
    Methods
    Visualizing the Translocation and Localization of Bacterial Type III Effector Proteins by Using a Genetically Encoded Reporter System
    Jayde A. Gawthorne, Laurent Audry, Claire McQuitty, Paul Dean, John M. Christie, Jost Enninga, Andrew J. Roe
  • Methods
    Versatile Vectors for Efficient Mutagenesis of Bradyrhizobium diazoefficiens and Other Alphaproteobacteria
    Raphael Ledermann, Silvan Strebel, Clara Kampik, Hans-Martin Fischer
  • Methods
    Extraction of Aerosol-Deposited Yersinia pestis from Indoor Surfaces To Determine Bacterial Environmental Decay
    Ian M. Gut, Ryan A. Bartlett, John J. Yeager, Brian Leroux, Shanna Ratnesar-Shumate, Paul Dabisch, David K. R. Karaolis

Microbial Ecology

  • Microbial Ecology
    Effect of Dietary Oxalate on the Gut Microbiota of the Mammalian Herbivore Neotoma albigula
    Aaron W. Miller, Kelly F. Oakeson, Colin Dale, M. Denise Dearing
  • Microbial Ecology
    Regional Similarities and Consistent Patterns of Local Variation in Beach Sand Bacterial Communities throughout the Northern Hemisphere
    Christopher Staley, Michael J. Sadowsky
  • Microbial Ecology
    Metagenomic Signatures of Bacterial Adaptation to Life in the Phyllosphere of a Salt-Secreting Desert Tree
    Omri M. Finkel, Tom O. Delmont, Anton F. Post, Shimshon Belkin
  • Open Access
    Microbial Ecology
    Functional Responses of Salt Marsh Microbial Communities to Long-Term Nutrient Enrichment
    Christopher J. Graves, Elizabeth J. Makrides, Victor T. Schmidt, Anne E. Giblin, Zoe G. Cardon, David M. Rand

Public and Environmental Health Microbiology

  • Public and Environmental Health Microbiology
    Environmental Contamination in Households of Patients with Recurrent Clostridium difficile Infection
    Megan K. Shaughnessy, Aleh Bobr, Michael A. Kuskowski, Brian D. Johnston, Michael J. Sadowsky, Alexander Khoruts, James R. Johnson
  • Public and Environmental Health Microbiology
    Data Acceptance Criteria for Standardized Human-Associated Fecal Source Identification Quantitative Real-Time PCR Methods
    Orin C. Shanks, Catherine A. Kelty, Robin Oshiro, Richard A. Haugland, Tania Madi, Lauren Brooks, Katharine G. Field, Mano Sivaganesan
  • Public and Environmental Health Microbiology
    Biofilms on Hospital Shower Hoses: Characterization and Implications for Nosocomial Infections
    Maria J. Soto-Giron, Luis M. Rodriguez-R, Chengwei Luo, Michael Elk, Hodon Ryu, Jill Hoelle, Jorge W. Santo Domingo, Konstantinos T. Konstantinidis

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Applied and Environmental Microbiology: 82 (9)

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volume 82, issue 9
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  • Community Structure of Arbuscular Mycorrhizal Fungi in Soils of Switchgrass Harvested for Bioenergy
  • Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation
  • Following Coffee Production from Cherries to Cup: Microbiological and Metabolomic Analysis of Wet Processing of Coffea arabica
  • Airborne Disinfection by Dry Fogging Efficiently Inactivates Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), Mycobacteria, and Bacterial Spores and Shows Limitations of Commercial Spore Carriers
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