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Applied and Environmental Microbiology
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Accepted Manuscripts

February 19, 2021

  • Open Access
    Biotechnology
    Laboratory evolution and reverse engineering of Clostridium thermocellum for growth on glucose and fructose
    Johannes Yayo, Teun Kuil, Daniel G. Olson, Lee R. Lynd, Evert K. Holwerda, Antonius J. A. van Maris
  • Open Access
    Environmental Microbiology
    Seafloor incubation experiment with deep-sea hydrothermal vent fluid reveals effect of pressure and lag time on autotrophic microbial communities
    Caroline S. Fortunato, David A. Butterfield, Benjamin Larson, Noah Lawrence-Slavas, Christopher K. Algar, Lisa Zeigler Allen, James F. Holden, Giora Proskurowski, Emily Reddington, Lucy C. Stewart, Begüm D. Topçuoğlu, Joseph J. Vallino, Julie A. Huber
  • Environmental Microbiology
    Comparison of culture-based strategies for isolating bacteria from the porcine intestine
    Paul E. Moote, Danisa M. Bescucci, Rodrigo Ortega Polo, Richard R. E. Uwiera, G. Douglas Inglis
  • Genetics and Molecular Biology
    Generation of genetic tools for gauging multiple gene expression at single cell level
    Marta Mellini, Massimiliano Lucidi, Francesco Imperi, Paolo Visca, Livia Leoni, Giordano Rampioni
  • Microbial Ecology
    “Sifarchaeota” a novel Asgard phylum from Costa Rica sediment capable of polysaccharide degradation and anaerobic methylotrophy
    Ibrahim F. Farag, Rui Zhao, Jennifer F. Biddle
  • Open Access
    Environmental Microbiology
    Metagenomic insights into the metabolic and ecological functions of abundant deep-sea hydrothermal vent DPANN archaea
    Ruining Cai, Jing Zhang, Rui Liu, Chaomin Sun
  • Public and Environmental Health Microbiology
    Linezolid resistance genes in enterococci isolated from sediment and zooplankton in two Italian coastal areas
    Simona Fioriti, Sonia Nina Coccitto, Nicholas Cedraro, Serena Simoni, Gianluca Morroni, Andrea Brenciani, Gianmarco Mangiaterra, Carla Vignaroli, Luigi Vezzulli, Francesca Biavasco, Eleonora Giovanetti
  • Plant Microbiology
    Production of Candicidin Isomers Is Essential for Biocontrol of Cucumber Rhizoctonia rot By Streptomyces albidoflavus W68
    Xueyan Yao, Zhenying Zhang, Jun Huang, Shiping Wei, Xianyun Sun, Yihua Chen, Hongwei Liu, Shaojie Li
  • Genetics and Molecular Biology
    The Tail-specific protease is important for Legionella pneumophila to survive thermal stress in water and inside amoeba
    Joseph Saoud, Thangadurai Mani, Sébastien P. Faucher
  • Plant Microbiology
    Biosurfactants produced by phyllosphere colonising pseudomonads impact on diesel degradation but not on colonisation of gnotobiotic arabidopsis leaves.
    S Oso, F Fuchs, C Übermuth, L Zander, S Daunaraviciute, D. M. Remus, I Stötzel, M Wüst, L Schreiber, M. N. P. Remus-Emsermann
  • Food Microbiology
    Volatile organic compounds mediated antifungal activity of Pichia and its effect on the metabolic profiles of fermentation communities
    Hongxia Zhang, Hai Du, Yan Xu
  • Environmental Microbiology
    Type VI secretion system facilitates fitness, homeostasis, and competitive advantages for environmental adaptability and efficient nicotine biodegradation
    Jun Li, Linlin Xie, Shulan Qian, Yuhang Tang, Mingjie Shen, Shanshan Li, Jie Wang, Lie Xiong, Jie Lu, Weihong Zhong
  • Open Access
    Physiology
    Genome copy number of a thermophilic cyanobacterium Thermosynechococcus elongatus E542 is controlled by growth phase and nutrient availability.
    Sadaf Riaz, Meng Xiao, Pengyu Chen, Meijin Li, Yixuan Cui, Maurycy Daroch
  • Food Microbiology
    Dietary inulin increases Lactiplantibacillus plantarum strain Lp900 persistence in rats depending on the dietary-calcium level.
    Jori Fuhren, Markus Schwalbe, Christiane Rösch, Reindert Nijland, Michiel Wels, Henk A. Schols, Michiel Kleerebezem
  • Food Microbiology
    Transcriptome analysis of Listeria monocytogenes exposed to beef fat reveals antimicrobial and pathogenicity attenuation mechanisms
    Yuan Yao Chen, Arun Kommadath, Payam Vahmani, Jeyachchandran Visvalingam, Michael E. R. Dugan, Xianqin Yang
  • Environmental Microbiology
    Two PAAR proteins with different C-terminal extended domains have distinct ecological functions in Myxococcus xanthus
    Ya Liu, Jianing Wang, Zheng Zhang, Feng Wang, Ya Gong, Duo-hong Sheng, Yue-zhong Li
  • Plant Microbiology
    A stringent response-defective Bradyrhizobium diazoefficiens does not activate the type-3-secretion system, elicits early plant defense, and circumvents NH4NO3-induced inhibition of nodulation
    Julieta Pérez-Giménez, Esteban T. Iturralde, Gonzalo Torres-Tejerizo, Juan Ignacio Quelas, Elizaveta Krol, Cecilia Borassi, Anke Becker, José M. Estevez, Aníbal R. Lodeiro
  • Open Access
    Food Microbiology
    Prevalence of Listeria species on food contact surfaces in Washington State apple packinghouses
    Blanca Ruiz-Llacsahuanga, Alexis Hamilton, Robyn Zaches, Ines Hanrahan, Faith Critzer

February 12, 2021

  • Open Access
    Biodegradation
    Redundancy in aromatic O-demethylation and ring opening reactions in Novosphingobium aromaticivorans and their impact in the metabolism of plant derived phenolics
    Jose M. Perez, Wayne S. Kontur, Carson Gehl, Derek M. Gille, Yanjun Ma, Alyssa V. Niles, German Umana, Timothy J. Donohue, Daniel R. Noguera
  • Plant Microbiology
    “Candidatus Liberibacter asiaticus” Secretes Nonclassically Secreted Proteins That Suppress Host Hypersensitive Cell Death and Induce Expression of Plant Pathogenesis-Related Proteins
    Peixiu Du, Chao Zhang, Xiuping Zou, Zongcai Zhu, Hailin Yan, Hada Wuriyanghan, Weimin Li

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DISCLAIMER: These manuscripts are provided "as is" without warranty of any kind, either expressly for a particular purpose, or non-infringement. Changes will be made to these manuscripts before publication. Review and/or use or reliance on these materials is at the discretion and risk of the reader/user. In no event shall the American Society for Microbiology be liable for damages of any kind arising from these materials; references to products or publications do not imply endorsement of those products or publications.

Accepted Manuscripts are PDF versions of manuscripts that have been peer reviewed and accepted but not yet copyedited. The manuscripts are published online as soon as possible after acceptance, on a weekly basis, before the copyedited, typeset articles are published. They are posted "as is" (i.e., as submitted by the authors at the modification stage) and do not reflect ASM editorial changes. No corrections/changes to the PDF manuscripts are accepted. Accordingly, there likely will be differences between the accepted manuscripts and the final, typeset articles. The manuscripts remain listed on the Accepted Manuscripts page until the final, typeset articles are posted. Supplemental material intended, and accepted, for publication is not posted until publication of the final, typeset articles.

Applied and Environmental Microbiology: 87 (6)

Current Issue

volume 87, issue 6
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  • Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation
  • Community Structure of Arbuscular Mycorrhizal Fungi in Soils of Switchgrass Harvested for Bioenergy
  • Encapsulation and Delivery of Therapeutic Phages
  • Interspecies Inhibition of Porphyromonas gingivalis by Yogurt-Derived Lactobacillus delbrueckii Requires Active Pyruvate Oxidase
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