Table 3.

List of the JCV types used in the phylogenetic analysisa

GenotypeStrain no.GenBank accession no.Reference
Type 1 (Europe)
 1AMad-1JO22717
 1A124AFO155263
 1B123AFO152274
Type 2 (Asia)
 2ATokyo-1AFO300854
 2A224AFO155294
 2A225AFO155304
 2A226AFO155314
 2B223AFO155324
 2B227AFO155334
 2C228AFO155344
 2C229AFO155354
 2D230AFO155364
Type 3 (Africa)
 3A308U735001
 3A312U735021
 3B311U735011
Type 4 (European and African American)402AFO155282
Type 5 (minor European)501AFO156844
Type 6 (West Africa)601AFO15537Unpublished data
Type 7 (Southeast Asia)Tai-3U6177128
  • a From the work of Jobes et al. (20).