Table 1.

Distribution of OTUs in the 12 16S rDNA clonal libraries

OTU(s)Frequency ona:
PVABRPEG-SPEG-LPEG-MPU
24 h72 h24 h72 h24 h72 h24 h72 h24 h72 h24 h72 h
D00134.65.333.73.610.83.423.330.818.013.0
D0023.95.33.61.83.138.115.024.211.516.12.07.4
D0035.88.86.07.33.13.413.11.94.0
D0043.93.52.412.77.76.010.04.68.96.09.3
D00513.521.18.421.86.210.75.013.619.62.011.1
D0061.81.55.01.51.82.0
D0075.0
D0083.3
D0095.81.23.612.314.33.322.79.63.65.6
D01011.55.34.89.11.54.83.31.53.64.0
D0111.51.7
D0123.11.71.5
D0131.91.81.23.64.61.21.74.63.916.0
D0141.81.51.71.9
D0155.82.41.81.51.71.94.0
D0163.63.41.71.910.7
D0171.81.71.53.9
D0181.91.81.7
D0194.81.51.91.83.7
D0202.4
D0212.41.91.9
D0221.2
D0231.21.51.2
D0241.21.52.01.9
D0251.81.21.25.44.0
D0263.6
D027, D073, D0741.8
D0285.54.61.91.82.0
D0293.91.52.0
D0301.95.31.81.52.0
D0311.94.61.9
D0321.9
D0331.93.62.0
D0344.6
D035, D0383.0
D036, D039, D0411.5
D0371.81.5
D0401.52.01.9
D0421.81.51.59.3
D0437.01.5
D0445.3
D0453.51.8
D046, D0473.5
D048, D050–D0541.8
D0491.81.93.7
D0553.63.1
D056, D057, D060, D1352.4
D058, D059, D061–D071, D128–D1301.2
D0721.51.8
D0753.1
D0761.51.9
D077–0791.5
D0801.83.1
D081–D088, D090–D093, D095–D0971.9
D0891.91.9
D0941.51.91.9
D098, D099, D1021.8
D100, D1031.81.9
D1013.6
D104, D1053.9
D106–D108, D1361.9
D109–D115, D117–D125, D1272.0
D1164.0
D1261.52.0
D1311.21.52.0
D132–1341.5
  • a Frequency (F) was calculated as follows: F = (m/N) × 100, where m is the number of clones having the same ARDRA pattern in a library and N is the total number of clones in the same library.