Table 2.

Oligonucleotide probe sequences, Escherichia coli positions, length, and references

Name/targetSequence (5′-3′)bPosition/lengthReference
Controla CCTAGTGACGCCGTCGACN/Ac/18 26
BacteriaACCGCTTGTGCGGGCCC927/17 5
ArchaeaGCGCCTGSTGCSCCCCGTAGGGCC338/24 5
Marine GI Crenarchaeota-1CTCCTGACCACTTGAGGT541/18 15
Marine GI Crenarchaeota-2TTAGGCCCAATAATCMTCCT554/20 19
Marine GII EuryarchaeotaTTAGGCCCAATAAAAKCGAC554/20 19
  • a Not expected to bind to any organism.

  • b K = G or T, M = A or C, S = C or G.

  • c N/A, not applicable.