TABLE 7.

LDhat recombination analysis

GeneCompleteGroup 1Group 2Group 3Group 4a
θρεθρεθρεθρεθρε
acn0.0290.0050.1720.0090.0000.0000.0150.0050.3320.0050.0081.5080.0070.0000.000
cts0.0340.0090.2640.0060.0010.1780.0260.0040.1580.0040.0000.0000.0040.0000.000
gapA0.0340.0090.2710.0060.0000.0000.0270.0040.1510.0200.0000.0000.0440.0000.000
gyrB0.0540.0100.1890.0210.0000.0000.0430.0000.0000.0310.0060.1960.0050.0132.880
pfk0.0500.0060.1210.0210.0000.0000.0390.0060.1570.0080.0000.000
pgi0.0490.0300.6220.0170.0000.0000.0230.0000.0000.0110.0050.465
rpoD0.0400.0050.1260.0370.0000.0000.0330.0000.0000.0080.0050.6530.0020.0000.000
    Concat.b0.0540.0110.2070.0170.0000.0000.0280.0040.1440.0130.0161.2750.0030.0000.000
    Mean0.0410.0110.2520.0170.0000.0250.0290.0030.1140.0120.0030.4030.0120.0030.576
  • a Values for pfk and pgi could not be calculated because of the lack of informative sites for the four members. Values for ρ were obtained by dividing the per-locus recombination rate estimate from LDhat by 1,000 (the approximate average length of a P. syringae gene).

  • b Concat., concatenated data set.