TABLE 3.

Allelic assignments for each strain testeda

StrainLineageSerotypeAllelic assignmenta
gyrBhisJcbiErnhBtruBribCcomEApurMaroEhisCaddB
MB79?b1/2bA1-001A1-002A1-001A1-001A1-001A1-007A1-001A1-001A1-001A1-001A1-001
FSL J1-038I1/2bA1-005A1-002A1-002A1-001A1-006A1-004A1-001A1-007A1-002A1-006A1-003
FSL J2-064I1/2bA1-001A1-002A1-001A1-001A1-001A1-007A1-001A1-001A1-001A1-002A1-001
FSL J1-051I4bA1-003A1-003A1-003A1-001A1-004A1-004A1-001A1-006A1-004A1-005A1-001
FSL J2-039I4bA1-003A1-002A1-005A1-002A1-003A1-006A1-001A1-009A1-006A1-008A1-003
FSL J2-045I4bA1-003A1-003A1-003A1-004A1-008A1-005A1-001A1-005A1-009A1-007A1-002
MB62I1/2bA1-006A1-001A1-002A1-001A1-006A1-001A1-002A1-003A1-005A1-003A1-001
MB67I4eA1-003A1-003A1-004A1-001A1-006A1-003A1-001A1-008A1-003A1-004A1-003
MB73I1/2bA1-002A1-002A1-001A1-001A1-002A1-007A1-001A1-001A1-001A1-001A1-001
MB76I1/2bA1-006A1-001A1-002A1-005A1-002A1-002A1-003A1-005A1-003A1-001
MB80I1/2bA1-004A1-003A1-002A1-001A1-001A1-004A1-001A1-008A1-008A1-003A1-001
MB81I3bA1-001A1-002A1-001A1-001A1-001A1-007A1-001A1-001A1-001A1-001A1-001
MB82I1/2bA1-004A1-003A1-002A1-001A1-007A1-004A1-001A1-002A1-009A1-003A1-001
MB88I1/2bA1-001A1-002A1-001A1-001A1-001A1-007A1-001A1-001A1-001A1-001A1-001
MB113I1/2bA1-006A1-001A1-002A1-001A1-006A1-001A1-002A1-004A1-005A1-003A1-001
MB121I3bA1-001A1-002A1-001A1-001A1-001A1-007A1-001A1-001A1-001A1-001A1-001
MB125I3bA1-001A1-002A1-001A1-003A1-001A1-007A1-001A1-001A1-001A1-001A1-001
FSL C1-117II1/2aB2-016B1-009B1-012B1-005 A4-015 B1-018B-005B1-019B1-020B1-011B1-010
FSL J2-003II1/2aB2-017B1-011 A3-008 B1-007 A6-017 B1-015B1-005 A3-014 B1-018B1-014B1-009
FSL J2-017II1/2aB2-017B1-010B1-012B1-005B2-022B1-014B1-005B2-024B1-022B1-011B1-011
FSL J1-022II1/2cB1-011B1-009B1-012B1-006B1-018B1-014B1-005 A1-009 B1-016B1-009B1-017
FSL J1-047II1/2cB1-011B1-009B1-012B1-006B1-018B1-014B1-005B1-018B1-017B1-009B1-017
MB17II1/2aB1-015B1-009B1-012B1-005B1-019B1-017B1-005B1-022B1-015B1-013B1-011
MB57II1/2aB1-011B1-009B1-012B1-006B1-018B1-014B1-005B1-017B1-019B1-010B1-017
MB58II1/2aB1-013B1-015B1-012B1-005 A3-013 A2-008 B1-005B1-021B1-021B1-012B1-016
MB96II1/2aB2-016B1-009B1-012B1-005B1-020B1-019B1-005 A3-016 B1-024 A3-020 B1-012
MB98II1/2aB1-014B1-012B1-013B1-005B1-021B1-017B1-005B1-022 C-025 B1-015B1-014
MB99II1/2aB1-012B1-014B1-012B1-005 A7-023 B1-017B1-005B1-020 C-025 A2-018 B1-013
MB117II3aB2-017B1-013B1-012B1-005 A5-016 B1-016B1-005B2-023B1-023B1-011B1-015
FSL X1-002III4aA2-009A2-004A3-007 B1-005 A3-011A2-009A3-004A3-015A2-010A2-017 B2-008
FSL J1158III4bA2-007A3-008A4-010 C-009 A2-010A2-013A2-003A2-011A3-014A4-022 B3-004
FSL J2068III4cA2-008A2-005A2-006 B1-006 A3-012A2-010 B1-005 A3-013A2-011A2-016 B2-006
FSL W1110III4cA2-010A2-006A3-009 B1-008 A3-014A2-011 B1-005 A3-012A2-012A2-019 B2-007
FSL W1111III4c B2-016 A3-007A5-011 B1-005 A2-009A2-012 B1-005 A2-010A3-013A4-021 B3-005
EGDc1/2aB1-011B1-009B1-012B1-006B1-018B1-014B1-006B1-017B1-019B1-009B1-017
  • a Allelic designations are formatted so that the alphanumeric to the left of the hyphen indicates an allogroup assignment as explained in the text, and the number to the right of the hyphen is an arbitrary unique allelic designation. Alleles in bold are incongruent with lineage and therefore are indications of probable recombination.

  • b The lineage type based on the ribotype could not be determined for strain 79.

  • c Sequences for L. monocytogenes EGD were obtained from the GenBank file (accession no. AL591824.ffn ); the lineage type for this strain was not previously determined, but the data are consistent with lineage II.