TABLE 1.

Bacterial isolates included in this study

Species and strainSubjectClosest species (% identity)aClosest 16S rRNA sequence (% identity)aAccession no.Reference(s)
Lactate utilizers
    A. caccae L1-92T1A. caccae (100)AJ2704874, 46
    P22A. caccae (99)46
    L2-71E. hallii (96)HuCA15 (98)AJ2704904
    SL6/1/13E. hallii (97)HuCA15 (99)AY30531734
    SM6/13E. hallii (98)p2001-s959-5 (99)AY30531834
    ART14E. hallii (98)bThis study
    SS2/13C. indolis (94)Adhufec25 (99)AY30531934
    SSC/23C. indolis (94)Adhufec25 (99)AY30532034
    ART925C. indolis (94)Adhufec25 (99)This study
Other isolates
    R. intestinalis L1-82T1R. intestinalis (100)AJ3123854, 15, 17
    A2-1836R. intestinalis (97)Adhufec225 (99)AJ2704824
    A2-1946R. intestinalis (94)HuCB37 (99)AJ2704734
    A1-866E. rectale (99)AJ2704754
    L2-501E. ruminantium (93)A19 (96)AJ2704914
    A2-1656F. prausnitzii (100)AJ2704694, 16, 17
    L2-321B. adolescentis (99)Bifidobacterium sp. strain PL1 (99)AY3053044
  • a Percent identity in 16S rRNA sequence (1,400 bases unless otherwise stated).

  • b Indicates partial 16S rRNA sequences (833 bases).