TABLE 2.

Insert marker DNAs showing hybridization specificity with E. coli isolates from geese

Insert DNALength (bp)Protein homolog in databaseGenBank accession no.No. of identical amino acids/ no. examinedaE value
GA9515Type III secretion apparatus protein (E. coli O157:H7 EDL933)AAG5798761/161 (37)1.00E-26
GB2332AIDA-I adhesin-like protein (E. coli O157:H7 RIMD 0509952)BAB3378581/123 (65)2.20E-40
GD5885TraT (E. coli plasmid R1)AAT85681112/132 (85)2.00E-57
GE3380NikB (E. coli O157:H7 RIMD 0509952)NP_05266130/88 (34)2.00E-05
GE11336AIDA-I adhesin-like protein (E. coli O157:H7 RIMD 0509952)BAB3378581/123 (66)1.00E-40
GF5346ORF5 (no significant homologous proteins in database) (E. coli B171)AAB3683457/58 (98)2.00E-27
GG11427Type III secretion protein EprH (E. coli O157:H7 RIMD 0509952)BAB3714231/101 (32)1.00E-11
  • a The values in parentheses are the percentages of identity with database entries.