TABLE 4.

Groups of 152 genes of Salmonella enterica serovar Typhimurium LT2 based on comparison patterns between various Salmonella serovars

GroupNo. of genesHomology witha:
S. enterica subsp. I serovar TyphimuriumS. enterica subsp. I serovar TyphiS. enterica subsp. I serovar Enteritidis PT4S. enterica subsp. I serovar Gallinarum 287/91S. enterica subsp. I serovar PullorumS. enterica subsp. I serovar DublinS. enterica subsp. I serovar Paratyphi A ATCC 9150S. enterica subsp. IIIb serovar Diarizonae 611,v1,5,(7)S. bongori subsp. V 12419
LT2DT104SL1344CT18Ty2
131++++++++++++
29+++++++++++
310+++− or =− or =− or =− or =− or =
43+++++− or =
512++++++++− or =+++
68++++++ or =+
78+++++++− or =++++
89+++++++++ or =+− or =
95+++++++− or =+++
103++++++
114++++++++− or =+− or =
122++++++− or =− or =+− or =− or =− or =
133++++++− or =+− or =+++
144+++++++++++
153++++++
163+++++++− or =+− or =− or =
17b35
Total152
  • a +, high homology, highest matched sequence size is more than 50% of query gene; =, moderate homology, highest matched sequence size is between 20 and 50% of query gene; −, low homology, highest matched sequence size is less than 20% of query gene.

  • b The genes of group 17 showed various comparison patterns. The data are shown in Data S2 in the supplemental material.