TABLE 6.

Possible functions of hypothetical genes expressed at higher levels under biofilm growth conditions

N315 open reading frameSimilarities to identified genes of other organismsa
SA0271 yukE/yfjA Bacillus subtilis family; small heat shock protein; similarity to bacterial protein with unknown function (DUF909)
SA2133Putative cytochrome (Escherichia coli O157:H7 EDL933); integral membrane protein; bacterial protein with unknown function (DUF805)
SA0412 ybcD (Bacillus subtilis), hypothetical protein
SA2143 yhbJ (Bacillus subtilis), hypothetical protein
SA0292No similarities found
SA0609Hypothetical protein (Bacillus subtilis); TNF family signature and profile
SA1403 yqeZ (Bacillus subtilis); protein with unknown function (DUF107)
SA2378Glyoxylase/bleomycin resistance protein/dioxygenase domain
SA2268Protein with unknown function (DUF805)
SA1985No similarities found
SA15866,7-Dimethyl-8-ribityllumazine synthase riboflavin synthase beta chain
SA0588Membrane protein (Staphylococcus epidermidis)
SA1290Poly(A) polymerase (Bacillus subtilis); polynucleotide adenyltransferase
SA0170 yrhF (Bacillus subtilis), hypothetical protein
SA1937Hypothetical protein (Deinococcus radiodurans)
  • a Similarities were determined by BLAST analysis, DOGAN, COG (1), InterProScan, and EMBL-EBI.