TABLE 2.

Levels of similarity for the Burkholderia symbionts detected in local samples of R. clavatus and L. chinensis and other Burkholderia strains based on 16S rRNA gene sequencesa

SampleR. clavatusL. chinensisBurkholderia sp.B. kurkiiB. glatheiB. sordidicolaB. capaciaB. graminis
IB1IB2IB3GNKYNRKCSGKMOK type 1OK type 2FKIB1IB2GNCBKYNRSGKM type 1KM type 2S4.9AK-5WD206NF100
R. clavatus
    IB110.980.9830.9740.980.9780.9770.9740.9840.9710.9690.9910.9810.9780.9920.9830.9830.9830.980.9850.9830.9780.9790.9810.9960.9720.9710.9720.9680.954
    IB210.9740.9810.9850.9830.9910.9760.9820.9820.9770.980.9730.9810.980.9770.9740.9740.9760.9740.9770.9830.9740.9730.9810.9690.9690.9650.9590.957
    IB310.9820.980.9830.9770.9850.9910.9740.9770.9870.9980.9830.9880.98810.9920.9770.9910.9870.9840.9920.9980.9850.9690.9740.9710.9610.952
    GN10.9860.9910.9820.9850.9880.9860.9880.9820.9810.9890.9810.9830.9820.9870.980.9870.9890.9910.9880.980.9790.9760.9740.9610.9580.953
    KY10.9930.990.980.9850.9850.9790.9810.9790.9940.980.980.980.980.9760.980.9830.9950.980.9770.9840.9760.9790.9680.9620.96
    NR10.9860.9830.9890.9860.9820.9850.9830.9960.9850.9830.9830.9840.9790.9840.9860.9990.9840.9810.9830.9730.9740.9650.960.959
    KC10.9760.9810.9860.9770.9760.9740.9860.9770.9760.9770.9740.9710.9740.9760.9870.9740.9750.9770.9710.9710.9610.9560.957
    SG10.9830.9830.9910.9830.9840.9820.9830.990.9850.9890.9910.9890.9850.9830.9890.9820.9790.9730.9710.9630.9590.958
    KM10.980.980.9880.9890.9880.9880.9870.9910.9880.9760.9910.9940.990.9880.9880.9860.9740.9770.9670.9650.953
    OK type 110.9850.9760.9730.9880.9750.9770.9740.9810.9790.9810.9830.9880.9780.9730.9710.9710.9660.9550.9490.953
    OK type 210.9780.9770.980.9770.9830.9770.9820.9870.9820.9830.9830.9820.9760.9740.9730.970.9590.9550.957
L. chinensis
    FK10.9860.9840.9990.990.9870.9870.9880.9880.9860.9850.9870.9850.9960.9660.9720.9720.9670.955
    IB110.9820.9870.9880.9980.9910.9760.990.9860.9830.9910.9960.9840.6680.9730.9710.960.949
    IB210.9830.9830.9830.9850.9770.9850.9870.9980.9830.980.9810.9730.9740.9630.9590.956
    GN10.9910.9880.9860.9880.9880.9850.9850.9860.9850.9950.9670.9710.9710.9660.955
    CB10.9880.990.9850.9910.9870.9840.990.9860.9850.9710.970.9660.9650.952
    KY10.9920.9770.9910.9870.9840.9920.9980.9850.9690.9740.9710.9610.952
    NR10.9810.9970.9930.9850.9970.990.9840.9740.9740.9660.960.95
    SG10.9810.9790.9790.9810.9740.9840.9670.9650.9660.9590.956
    KM type 110.9960.9850.9940.9880.9870.9750.9730.9650.9630.95
    KM type 210.9870.9910.9850.9850.9770.9750.9650.9640.951
Burkholderia sp.
    S4.910.9850.9820.9830.9740.9750.9650.9610.959
    AK-510.990.9840.9720.9740.9660.9610.951
    WD20610.9820.9670.9710.9690.9580.949
    NF10010.9710.9750.9760.9710.957
B. kirkii10.9680.9550.9590.952
B. glathei10.9720.960.956
B. sordidicola10.9670.952
B. cepacia10.948
B. graminis1
  • a The levels of similarity were calculated by using Kimura's two-parameter model.