TABLE 1.

Gene sequence variation within species

Species (strains)% Sequence variation
rpoArecApyrH
Enterovibrio norvegicus (LMG 19839T, LMG 19840, LMG 19842, R-3717)0.20.41.0
E. coralii (LMG 22228T)
Grimontia hollisae (LMG 17719T, LMG 21416, LMG 21538)0.10.00.1
Photobacterium angustum (LMG 8455T)
P. damselae subsp. damselae (LMG 7892T, LMG 10940, LMG 19445)0.10.11.0
P. rosenbergii (LMG 22223T, LMG 22224, LMG 22225, LMG 22226, LMG 22227, R-21419)0.45.53.0
P. leiognathi (LMG 4228T, LMG 10944, LMG 11221)0.21.02.0
P. phosphoreum (LMG 4233T)
Salinivibrio costicola subsp. costicola (LMG 11651T)
Vibrio aerogenes (LMG 19650T)
V. aestuarianus (LMG 7909T)
V. alginolyticus (LMG 4409T, LMG 2174, LMG 4407, LMG 19993, R-14876)0.61.01.5
V. anguillarum (LMG 4437T, LMG 10861)0.20.5
V. brasiliensis (LMG 20546T, LMG 20010)0.00.1
V. campbellii (LMG 11216T, LMG 11256, LMG 16835, LMG 20369, R-14899, R-14902, R-21413, R-21427, R-21434)0.43.02.0
V. chagasii (LMG 21353T, LMG 13219, LMG 13237)0.12.0
V. cholerae (LMG 21698T, R-18244, R-18258, R-18297, R-18303, R-20544, R-20545, R-20546, R-20548)0.16.05.0
V. cincinnatiensis (LMG 7891T)
V. coralliilyticus (LMG 20984T, LMG 10953, LMG 19270, LMG 20538, LMG 20548, LMG 21350, R-14978, R-14968, R-21432, R-23286)0.94.03.0
V. cyclitrophicus (LMG 21359T, LMG 20001, R-14874)0.03.0
V. diabolicus (LMG 19805T)
V. diazotrophicus (LMG 7893T, LMG 11217, LMG 13218, LMG 20033, R-3706)0.51.61.5
V. ezurae (LMG 19970T, LMG 19979, R-15766)0.00.40.5
V. fischeri (LMG 4414T, LMG 11653)0.24.02.0
V. fluvialis (LMG 7894T, LMG 11654, R-15090)0.21.81.0
V. fortis (LMG 21557T, LMG 20547, R-15037, R-21409, R-21431)0.36.06.0
V. furnissii (LMG 7910T, LMG 11655, LMG 11656, LMG 11758)0.20.71.5
V. gallicus (LMG 21330T)
V. gazogenes (LMG 19540T)
V. halioticoli (LMG 18542T, LMG 19700, LMG 19963, LMG 19975)0.11.52.0
V. harveyi (LMG 4044T, LMG 7890, LMG 11226, LMG 19643, LMG 19714, LMG 20977, R-14947, LMG 11659, LMG 20370, R-14913, R-21410, R-21426, R-21435, R-21439)2.04.21.5
V. hepatarius (LMG 20362T)
V. hispanicus (LMG 13240T)
V. ichthyoenteri (LMG 19664T, R-3774, R-3789, R-3911)0.11.00.1
V. kanaloaei (LMG 20539T, R-15010)0.00.20.1
V. lentus (LMG 21034T, R-3884, R-3895, R-3912)0.22.61.5
V. logei (LMG 19806T)
V. mediterranei (LMG 11258T, LMG 11663, LMG 16836, LMG 19703T, R-14988, R-14989, R-14990, R-21415)0.20.44.0
V. metschnikovii (LMG 11664T, LMG 4416, LMG 4426, R-22290)0.03.23.5
V. mimicus (LMG 7896T, R-20564, R-20565, R-20568)0.12.53.0
V. mytili (LMG 19157T)
V. natriegens (LMG 10935T)
V. navarrensis (LMG 15976T)
V. neonatus (LMG 19972T, LMG 19976, LMG 19978)0.11.82.0
V. neptunius (LMG 20536T, LMG 20613, R-1575)0.20.61.0
V. nereis (LMG 3895T)
V. nigripulchritudo (LMG 3896T)
V. ordalii (LMG 13544T, LMG 10951, R-15101, R-15107)0.00.72.0
V. orientalis (LMG 7897T)
V. pacinii (LMG 19999T, LMG 13245, R-15016)0.11.11.5
V. parahaemolyticus (LMG 2850T, LMG 11670, RIMD 2210633)0.36.06.0
V. pectenicida (LMG 19642T, LMG 20549, LMG 20550)0.00.01.5
V. pelagius (LMG 3897T, LMG 19995)0.10.5
V. penaeicida (LMG 19663T)
V. pomeroyi (LMG 20537T, R-14805)0.22.21.5
V. proteolyticus (LMG 3772T, R-15065)0.00.00.5
V. rotiferianus (LMG 21460T, R-14935, R-21416, R-21422, R-21433)0.00.60.5
V. rumoiensis (LMG 20038T, LMG 20039)0.00.30.5
V. scophthalmi (LMG 19158T, LMG 20023, R-15029)0.00.8
V. splendidus (LMG 19031T, R-14789, LMG 16748, LMG 16751, LMG 16752)0.86.01.0
V. superstes (LMG 21323T)
V. tapetis (LMG 19706T, LMG 19704, LMG 19705)0.00.01.0
V. tasmaniensis (LMG 20012T, R-14842, R-14846)0.00.61.0
V. tubiashii (LMG 10936T, LMG 16851, R-14825)1.03.33.7
V. vulnificus (LMG 13545T, R-15063, CMCP6)0.31.32.4
V. wodanis (K16, K26)0.10.31.1
V. xuii (LMG 21346T, LMG 20011, R-15053)0.11.71.2