TABLE 5.

Selected core genome features differentially expressed between L. monocytogenes strains belonging to lineages I and IIa

Locus tagGene; functionMP
lmo0200prfA; listeriolysin-positive regulatory protein13.50.87
lmo0201plcA; phosphatidylinositol-specific phospholipase C21.30.98
lmo0202hly; listeriolysin O precursor8.80.9
lmo0204actA; actin-assembly inducing protein precursor0.540.96
lmo0205plcB; phospholipase C19.40.84
lmo0433inlA; internalin A15.30.93
lmo0434inlB; internalin B2.350.95
lmo1074Similar to TA translocation permease protein TagG0.670.88
lmo1075Similar to TA translocation ATP-binding protein TagH1.550.96
lmo0842Putative peptidoglycan-bound protein (LPXTG motif)0.240.98
lmo0441Similar to penicillin-binding protein (d-alanyl-d-alanine carboxypeptidase)−1.120.94
lmo0540Similar to penicillin-binding protein−2.540.97
lmo1892Similar to penicillin-binding protein 2A−3.640.96
lmo2229Similar to penicillin-binding protein−1.980.99
  • a lmo indicates locus tags of L. monocytogenes strain EGDe accessible at http://genolist.pasteur.fr/ListiList/. M = log2(GlinI/GlinII), where linI and linII are lineages I and II. P = Pr(LinI > LinII) when M is a positive number, and P = Pr(LinII > LinI) when M is a negative number.