TABLE 2.

Wild-type and mutant probe sequences

Gene and nt position (sSNP)bWild-type probeMutant probe
SequenceaSize (bp)SequenceaSize (bp)
oxyR-37 (G-A)CCACCGCGGCGAACGCGCGAAGCCCTTTTTTTTTTTTTTTTTTTT35GCGGCGAACGCGCGAAACCCGTTTTTTTTTTTTTTTTTTTT31
katG-87 (C-A)ACCCCGTCGAGGGCGGCGGTTTTTTTTTTTTTTTTTTTT29ACCCAGTCGAGGGCGGCGGATTTTTTTTTTTTTTTTTTTT30
rpoB-2646 (A-C)CGGCCAGCTTGTCACCGTCGGTTTTTTTTTTTTTTTTTTTT31CGGCCAGCTTGTCCCCGTCGGTTTTTTTTTTTTTTTTTTTT31
rpoB-3243 (A-G)CTCCTGCAGGGTGTAGGCAGCTTTTTTTTTTTTTTTTTTTT31TCCTGCAGGGTGTAGGCGGCATTTTTTTTTTTTTTTTTTTT31
  • a Polymorphic sites are boldfaced.

  • b In parentheses are wild-type-to-mutant base conversions.