TABLE 5.

Number of isolates belonging to each lineage according to sSNP analysis and concordance with MIRU-VNTR results for all M. tuberculosis and M. bovis isolates tested

Lineage defined by sSNPsTotal no. of isolates testedaConcordance with MIRU-VNTR results (%)
I3631 (86.1)
II245220 (89.8)
III10099 (99.0)
IV8877 (87.5)
M. bovis4944 (89.8)
    Total518471 (90.9)
  • a Excludes three isolates from panel 1 that did not amplify.