TABLE 1.

Flagellar/chemotaxis system

Category and geneGene productExpressiona at:
T1T2T3T4T5T6T7T8
Early class
    flhDTranscriptional dual regulator SU0.18−0.20−0.39−0.05−0.12−0.33−0.37−0.50
Middle class
    fliASigma 280.10−0.26−0.29−0.64−0.55−0.68−1.00−2.42
    ycgRInvolved in flagellar motility0.080.02−0.740.150.060.060.220.05
    flgBBasal body rod protein0.07−0.10−0.40−0.290.07−0.20−0.45−1.32
    flgDInitiation of hook assembly−0.22−0.25−0.35−0.59−0.41−0.54−0.98−1.44
    flgEFlagellar hook protein0.20−0.56−0.68−0.52−0.27−0.58−0.87−1.96
    flgCBasal body rod protein−0.09−0.47−0.40−0.35−0.50−0.63−0.99−2.04
    flgAFlagellar biosynthesis−0.08−0.120.03−0.310.090.36−0.05−0.71
    flgJFlagellum-specific muramidase−0.03−0.45−0.63−0.52−0.08−0.08−0.30−0.61
    flgGBasal body rod protein−0.09−0.43−0.95−0.36−0.02−0.41−0.41−0.98
    flgHFlagellar L-ring protein−0.09−0.40−0.48−0.030.33−0.03−0.17−0.59
    flgKHook filament junction protein 1−0.08−0.44−0.640.06−0.04−0.31−0.39−0.77
    fliDFlagellar cap protein0.09−0.08−0.39−0.25−0.14−0.15−0.24−0.25
    fliSFlagellum biosynthesis protein−0.04−0.24−0.59−0.63−0.34−0.30−0.63−0.90
    fliMMotor switch protein−0.01−0.32−0.54−0.49−0.330.18−0.29−1.04
    fliEBasal body protein−0.36−0.81−0.51−0.84−0.47−0.24−0.39−1.20
Late class
    motAFlagellar motor complex component−0.20−0.19−0.62−0.22−0.21−0.83−0.23−0.27
    cheRChemotaxis protein methyltransferase0.09−0.050.42−0.40−0.200.12−0.020.11
Other
    fhiAFlagellar system protein0.030.060.070.470.080.310.210.12
Associated regulatory proteins
    csrACarbon storage regulator0.02−0.48−0.29−0.31−0.50−0.49−0.07−0.15
    hnsTranscriptional dual regulator0.130.320.420.630.091.210.280.06
    lrhATranscriptional repressor−0.070.090.360.310.160.320.420.33
    ygiXTranscriptional activator QseB−0.20−0.170.08−0.41−0.15−0.26−0.09−0.03
  • a Coefficients of the linear model. Underlining indicates significantly differential expression.