TABLE 1.

Organisms used in the FISH specificity studies and the results of the FISH specificity tests

StrainCodeProbe result
Phasco741Veil223Ehal1469Lach571Ecyl387Rbro730Rfla729
Succiniclasticum ruminis DSM 9236+
Acidaminococcus fermentans MMB+
Veillonella atypica subsp. rodentiumDSM 20737+
Veillonella parvula MMB+
Clostridium polysaccharolyticum DSM 1801+
Lachnospira multipara DSM 3073+
Eubacterium eligens MMB+
Eubacterium cylindroides DSM 20477+
Clostridium innocuum MMB+
Clostridium leptum DSM 753+
Clostridium sporosphaeroides DSM 1294+
Ruminococcus bromii ATCC 27255+
Ruminococcus albus ATCC 27210++
Ruminococcus flavefaciens ATCC 19208+
Ruminococcus callidus ATCC 27760+
Eubacterium siraeum DSM 3996+
Atopobium parvulum MMB
Bacteroides fragilis DSM2151
Bacteroides ovatus MMB
Bacteroides splanchnicus MMB
Bacteroides thetaiotaomicron MMB
Bacteroides uniformis MMB
Bifidobacterium adolescentis MMB
Bifidobacterium dentium NIZO B679
Bifidobacterium infantis MMB
Bifidobacterium longum MMB
Bifidobacterium pseudolongum MMB
Clostridium aminovalericum MMB
Clostridium beijerinckii MMB
Clostridium butyricum MMB
Clostridium carnis MMB
Clostridium difficile DSM 1296
Clostridium histolyticum MMB
Clostridium perfringens MMB
Clostridium putrificum DSM 1734
Clostridium sporogenes MMB
Clostridium tyrobutyricum MMB
Collinsella aerofaciens DSM 13713
Eubacterium moniliforme MMB
Eubacterium plautii DSM 4000
Eubacterium tenue DSM 20695
Eubacterium ventriosum DSM 3988
Lactobacillus brevis DSM 20468
Peptostreptococcus prevotii DSM 20548
Prevotella intermedia ATCC 49046
Sporomusa paucivorans DSM 3697