TABLE 1.

Organisms used in the FISH specificity studies and the results of the FISH specificity tests

StrainCodeProbe result
Phasco741Veil223Ehal1469Lach571Ecyl387Rbro730Rfla729
Succiniclasticum ruminisDSM 9236+
Acidaminococcus fermentansMMB+
Veillonella atypica subsp. rodentiumDSM 20737+
Veillonella parvulaMMB+
Clostridium polysaccharolyticumDSM 1801+
Lachnospira multiparaDSM 3073+
Eubacterium eligensMMB+
Eubacterium cylindroidesDSM 20477+
Clostridium innocuumMMB+
Clostridium leptumDSM 753+
Clostridium sporosphaeroidesDSM 1294+
Ruminococcus bromiiATCC 27255+
Ruminococcus albusATCC 27210++
Ruminococcus flavefaciensATCC 19208+
Ruminococcus callidusATCC 27760+
Eubacterium siraeumDSM 3996+
Atopobium parvulumMMB
Bacteroides fragilisDSM2151
Bacteroides ovatusMMB
Bacteroides splanchnicusMMB
Bacteroides thetaiotaomicronMMB
Bacteroides uniformisMMB
Bifidobacterium adolescentisMMB
Bifidobacterium dentiumNIZO B679
Bifidobacterium infantisMMB
Bifidobacterium longumMMB
Bifidobacterium pseudolongumMMB
Clostridium aminovalericumMMB
Clostridium beijerinckiiMMB
Clostridium butyricumMMB
Clostridium carnisMMB
Clostridium difficileDSM 1296
Clostridium histolyticumMMB
Clostridium perfringensMMB
Clostridium putrificumDSM 1734
Clostridium sporogenesMMB
Clostridium tyrobutyricumMMB
Collinsella aerofaciensDSM 13713
Eubacterium moniliformeMMB
Eubacterium plautiiDSM 4000
Eubacterium tenueDSM 20695
Eubacterium ventriosumDSM 3988
Lactobacillus brevisDSM 20468
Peptostreptococcus prevotiiDSM 20548
Prevotella intermediaATCC 49046
Sporomusa paucivoransDSM 3697