TABLE 4.

Number of sequences classified by JGasta

RegionNo. of sequences assigned to:
RootKingdomPhylumClassOrderFamilyGenusSpecies
V1-V211,31611,31611,13710,96810,1049,5136,907424
V612,27711,80411,45111,3759,9389,5706,335524
V6-V711,64511,64411,36711,2919,9629,7536,9681,277
  • a Assignment of sequences required that there be at least 85% sequence identity between the query sequence and the reference sequence in the Greengenes file and that the nearest neighbor(s) be classified with at least an 80% RDP confidence at the given taxon.