TABLE 1

Organisms whose genomes encode GRMs and additional BMC loci

OrganismGRM locus type(s)Additional BMC locus type(s)a
Alkaliphilus metalliredigens QYMFGRM1BUF
Alkaliphilus oremlandii OhILAsGRM1EUT2, BUF
Clostridium botulinum A3 strain Loch MareeGRM1Satellite
Clostridium botulinum B strain Eklund 17BGRM1MUF
Clostridium botulinum B1 strain OkraGRM1Satellite
Clostridium botulinum E3 strain Alaska E43GRM1MUF
Clostridium botulinum F strain LangelandGRM1Satellite
Clostridium ljungdahlii DSM 13528GRM1, GRM3Satellite, satellite-like
Clostridium phytofermentans ISDgGRM1, GRM5EUT2
Clostridium saccharolyticum WM1GRM1EUT2, PVM-like
Clostridium tetani E88GRM1EUT2
Desulfitobacterium dehalogenans ATCC 51507GRM1, GUF
Desulfitobacterium hafniense DCB-2GRM1, GUFEUT3
Desulfitobacterium hafniense Y51GRM1, GUFEUT3
Desulfosporosinus meridiei DSM 13257GRM1EUT2 (2×)
Desulfosporosinus orientis DSM 765GRM1EUT2, EUT other
Desulfotalea psychrophila LSv54GRM1, GUF
Desulfotomaculum reducens MI-1GRM1EUT2
Escherichia coli 536GRM2EUT1
Escherichia coli APEC O1GRM3EUT1
Escherichia coli CFT073GRM3EUT1
Escherichia coli ED1aGRM3EUT1
Escherichia coli IAI39GRM2EUT1
Escherichia coli O7:K1 strain CE10GRM2EUT1
Escherichia coli S88GRM3EUT1
Escherichia coli UTI89GRM2EUT1
Escherichia fergusonii ATCC 35469PDU/GRM2-fusionEUT1
Klebsiella oxytoca E718GRM2EUT1, PDU1
Klebsiella oxytoca KCTC 1686GRM2EUT1, PDU1
Klebsiella pneumoniae 342GRM2EUT1, PDU1
Klebsiella variicola At-22GRM2EUT1, PDU1
Raoultella ornithinolytica B6GRM2, GRM3
Ruminococcus obeum A2-162GRM5Satellite, satellite-like
Ruminococcus sp. SR1/5GRM5Satellite, satellite-like
Ruminococcus torques L2-14GRM5Satellite, satellite-like
  • a The BMC locus nomenclature is that described by Axen et al. (5). BUF, BMC of unknown function; MUF, metabolosome of unknown function; PVM, Planctomycetes and Verrucomicrobia microcompartment.