Table 2

G. anatis homologs of H. influenzae competence proteins and regulatorsa

H. influenzaeG. anatis 12656-12G. anatis UMN179
Category and homolog (locus ID)Length (aa)HomologLength (aa)Sequence ID (%)bLocus IDLength (aa)
Regulation
    CRP (HI_0957)224CRP21974UMN179_00941218
    Sxy (HI_0601)217Sxy21434UMN179_00887214
DNA uptake
    ComA (HI_0439)265ComA27223UMN179_01492272
    ComB (HI_0438)168ComB18428UMN179_01491184
    ComC (HI_0437)173ComC17622UMN179_01490176
    ComD (HI_0436)137AbsentAbsent
    ComE (HI_0435)445ComE38038UMN179_01489380
    ComF/Com101 (HI_0434)228ComF23252UMN179_01573232
    ComE1 (HI_1008)112ComE110944UMN179_01573109
    PilA (HI_0299)148PilA15351UMN179_01819153
    PilB(HI_0298)464PilB46958UMN179_01820469
    PilC (HI_0297)406PilC40237UMN179_01821402
    PilD (HI_0296)230PilD20923UMN179_01822213
    PulG/ComN (HI_0938)170ComN17732UMN179_01010177
    PulJ/ComO (HI_0939)238ComO24035UMN179_01009240
    ComP (HI_0939)227ComP21725UMN179_01008217
    ComQ (HI_0941)101ComQ9829UMN179_0100798
    Rec2 (HI_0061)788Rec279437UMN179_00665794
    PilF2 (HI_0366)179PilF218641UMN179_00438186
DNA processing
    ComM (HI_1117)509ComM51275UMN179_01347512
    DprA (HI_0985)373DprA39849UMN179_01231398
    RadC (HI_0952)234RadC22058UMN179_00946221
    Ssb (HI_0250)168Ssb17161UMN179_01039171
    LigA (HI_1182)185LigA27538UMN179_00865275
Unknown function
    HI0660 (HI_0660)119AbsentAbsent
    HI0659 (HI_0659)98AbsentAbsent
    HI1631 (HI_1631)190AbsentAbsent
  • a ID, identity; aa, amino acid.

  • b Sequence identity between G. anatis 12656-12 and H. influenzae Rd KW20 predicted proteins.