Table 4

Highly discriminant bacterial patterns exclusive to AIN-76-fed mice

GenotypeBacterial patternSamplesaClassification (phylum; class; order; family)
ERβ+/+Uncultured bacterium A610Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae
Uncultured bacterium NiASF289Acidobacteria
Uncultured bacterium FGL12B728Unclassified
Uncultured bacterium S26-358Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
Uncultured bacterium SJTUE02558Firmicutes; Clostridia; Clostridiales; Ruminococcaceae
Uncultured organism MAT-CR-P4-C098Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae
Uncultured bacterium D13S-447Proteobacteria; Gammaproteobacteria
Uncultured Cytophaga sp. BD1-157Bacteroidetes; Sphingobacteria; Sphingobacteriales; Rhodothermaceae
Alcanivorax sp. Nag16Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae
Granulosicoccus sp. ZS4-226Proteobacteria; Gammaproteobacteria; Chromatiales; Granulosicoccaceae
Pseudomonas cichorii AMP036Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae
Uncultured bacterium JH-WHS1376Acidobacteria
ERβ−/−Uncultured bacterium A614Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae
Uncultured bacterium S26-3512Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
Uncultured bacterium FGL12B7211Unclassified
Uncultured Acidobacterium sp. 16L410Acidobacteria
Uncultured bacterium Kas162B9Bacteroidetes
Uncultured Caldilinea sp. B01-03F9Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae
Uncultured deltaproteobacterium Bac48Flocs9Proteobacteria
Chlorobium limicola UdG 60456Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae
Clostridium cellulovorans DSM 30526Firmicutes; Clostridia; Clostridiales
Halomonas sp. P406Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae
Uncultured bacterium B8S-1146Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae
Uncultured bacterium CCM6b6Chloroflexi
Uncultured bacterium E126Verrucomicrobia
  • a Number of samples in which the species pattern was found among the 21 samples examined.