TABLE 3

Genomic analysis of benzoate- and gentisate-degradative pathways in C. testosteroni strain CNB-1a

Gene (ORF)Gene product (no. of aa)Related gene product
NameFunctionOrganism% identity; no. of aaAccession no.
CtCNB1_0065BoxA (433)BoxABenzoyl-CoA oxygenase component AAzoarcus evansii59; 414Q9AIX6
CtCNB1_0066BoxB (474)BoxBBenzoyl-CoA oxygenase component BAzoarcus evansii72; 473Q9AIX7
CtCNB1_0067BoxC (552)BoxCBenzoyl-CoA-dihydrodiol lyaseAzoarcus evansii67; 555Q84HH6
CtCNB1_0091TE (157)PaaIThioesteraseHaemophilus influenzae47; 1381SC0_A
CtCNB1_0092LivF (233)LivFABC transporter, ATPase componentAzoarcus sp. strain CIB57; 257CCD33112
CtCNB1_0093LivG (256)LivGABC transporter, ATPase componentAzoarcus sp. strain CIB57; 252CCD33113
CtCNB1_0094LivM (364)LivMABC transporter, permease componentAzoarcus sp. strain CIB47; 329CCH23034
CtCNB1_0095LivH (289)LivHABC transporter, permease componentsAzoarcus evansii62; 288AAN39369
CtCNB1_0096LivK (387)LivKABC transporter, periplasmic componentAzoarcus evansii70; 391AAL02078
CtCNB1_0097BCL (521)BCLBenzoate-CoA ligaseRhodopseudomonas palustris64; 5244EAT_A
CtCNB1_0098BoxD (531)BoxDAldehyde dehydrogenaseBurkholderia xenovorans LB40064; 5322VRO_A
CtCNB1_0099BoxR (300)BoxRTranscriptional regulatorAzoarcus sp. strain CIB51; 300CCD33120
CtCNB1_2776LysR (300)LysRTranscriptional regulator, LysR familyPseudomonas sp. strain 19-rlim55; 298AEO27403
CtCNB1_2777GenR (200)GenRTranscriptional regulatory proteinComamonas testosteroni55; 172BAF34929
CtCNB1_2778GenA (375)GenAGentisate 1,2-dioxygenaseRhodococcus sp. strain NCIMB 1203861; 359ADT78164
CtCNB1_2779GenB (239)GenBFumarylpyruvate hydroxylaseRalstonia sp.78; 192O86042
CtCNB1_2780GenC (214)GenCMaleylpyruvate isomeraseRalstonia sp.70; 212O86043
  • a aa, amino acids.