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Applied and Environmental Microbiology
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antimicrobial resistance

  • Effect of Macrolide and Rifampin Resistance on the Fitness of <span class="named-content genus-species" id="named-content-1">Rhodococcus equi</span>
    Environmental Microbiology
    Effect of Macrolide and Rifampin Resistance on the Fitness of Rhodococcus equi

    This work advances our understanding of the opportunistic environmental pathogen Rhodococcus equi, a disease agent affecting horses and immunocompromised people. R. equi is one of the most common causes of severe pneumonia in young horses. For decades, the standard treatment for...

    Jennifer M. Willingham-Lane, Londa J. Berghaus, Roy D. Berghaus, Kelsey A. Hart, Steeve Giguère
  • Genomic Diversity, Virulence, and Antimicrobial Resistance of <em>Klebsiella pneumoniae</em> Strains from Cows and Humans
    Evolutionary and Genomic Microbiology
    Genomic Diversity, Virulence, and Antimicrobial Resistance of Klebsiella pneumoniae Strains from Cows and Humans

    We demonstrate here the genetic diversity of K. pneumoniae isolates from dairy cows and the mixed phylogenetic lineages between bovine and human isolates. The ferric uptake operon kfuABC genes were more prevalent in strains from clinical mastitis cows. Furthermore, we report the emergence of an IncN-type plasmid carrying the blaCTX-M-1 and...

    Yongqiang Yang, Catherine H. Higgins, Ibraheem Rehman, Klibs N. Galvao, Ilana L. Brito, Marcela L. Bicalho, Jeongmin Song, Hongning Wang, Rodrigo C. Bicalho
  • Population Genetics and Characterization of <span class="named-content genus-species" id="named-content-1">Campylobacter jejuni</span> Isolates from Western Jackdaws and Game Birds in Finland
    Public and Environmental Health Microbiology
    Population Genetics and Characterization of Campylobacter jejuni Isolates from Western Jackdaws and Game Birds in Finland

    The roles of environmental reservoirs, including wild birds, in the molecular epidemiology of Campylobacter jejuni have not been assessed in depth. Our results showed that game birds may pose a risk for acquiring campylobacteriosis, because they had C. jejuni genomotypes highly similar to human...

    Sara Kovanen, Mirko Rossi, Mari Pohja-Mykrä, Timo Nieminen, Mirja Raunio-Saarnisto, Mikaela Sauvala, Maria Fredriksson-Ahomaa, Marja-Liisa Hänninen, Rauni Kivistö
  • Open Access
    Droplet- Rather than Aerosol-Mediated Dispersion Is the Primary Mechanism of Bacterial Transmission from Contaminated Hand-Washing Sink Traps
    Public and Environmental Health Microbiology | Spotlight
    Droplet- Rather than Aerosol-Mediated Dispersion Is the Primary Mechanism of Bacterial Transmission from Contaminated Hand-Washing Sink Traps

    Among the possible environmental reservoirs in a patient care environment, sink drains are increasingly recognized as a potential reservoir to hospitalized patients of multidrug-resistant health care-associated pathogens. With increasing antimicrobial resistance limiting therapeutic options for patients, a better understanding of how pathogens disseminate from sink drains is urgently needed. Once this knowledge gap has decreased,...

    Shireen M. Kotay, Rodney M. Donlan, Christine Ganim, Katie Barry, Bryan E. Christensen, Amy J. Mathers
  • Genus-Wide Assessment of Antibiotic Resistance in <em>Lactobacillus</em> spp.
    Food Microbiology | Spotlight
    Genus-Wide Assessment of Antibiotic Resistance in Lactobacillus spp.

    Lactobacillus species are generally considered to be nonpathogenic and are used in a wide variety of foods and products for humans and animals. However, many of the species examined in this study have antibiotic resistance levels which exceed those recommended by the EFSA, suggesting that these cutoff values should be reexamined in light of the genetic basis for...

    Ilenia Campedelli, Harsh Mathur, Elisa Salvetti, Siobhán Clarke, Mary C. Rea, Sandra Torriani, R. Paul Ross, Colin Hill, Paul W. O’Toole
  • Chronic Airway Colonization by <span class="named-content genus-species" id="named-content-1">Achromobacter xylosoxidans</span> in Cystic Fibrosis Patients Is Not Sustained by Their Domestic Environment
    Environmental Microbiology
    Chronic Airway Colonization by Achromobacter xylosoxidans in Cystic Fibrosis Patients Is Not Sustained by Their Domestic Environment

    Achromobacter spp. are worldwide emerging opportunistic pathogens in CF patients, able to chronically colonize the respiratory tract. Apart from regular consultations at the hospital CF center, patients spend most of their time at home. Colonization from nonhuman sources has been suggested, but the presence of...

    Chloé Dupont, Estelle Jumas-Bilak, Clara Doisy, Fabien Aujoulat, Raphaël Chiron, Hélène Marchandin
  • Public and Environmental Health Microbiology
    Yersinia pseudotuberculosis Prevalence and Diversity in Wild Boars in Northeast Germany

    Yersinia pseudotuberculosis is a foodborne pathogen whose occurrence is poorly understood. One reason for this situation is the difficulty in isolating the species. The methods developed for the isolation of Yersinia enterocolitica are not well suited for...

    Marie Reinhardt, Jens Andre Hammerl, Katharina Kunz, Andrea Barac, Karsten Nöckler, Stefan Hertwig
  • Food Microbiology
    Proximity to Other Commercial Turkey Farms Affects Colonization Onset, Genotypes, and Antimicrobial Resistance Profiles of Campylobacter spp. in Turkeys: Suggestive Evidence from a Paired-Farm Model

    Colonization of poultry with Campylobacter at the farm level is complex, poorly understood, and critically linked to contamination of poultry products, which is known to constitute a leading risk factor for human campylobacteriosis. Here, we investigated the use of a paired-farm design under standard production conditions and in the absence of experimental...

    Jeffrey A. Niedermeyer, Lynde Ring, William G. Miller, Seiche Genger, Christina Parr Lindsey, Jason Osborne, Sophia Kathariou
  • Environmental Microbiology
    Isolation of Toxigenic Clostridium difficile from Animal Manure and Composts Being Used as Biological Soil Amendments

    Clostridium difficile infection (CDI) is a leading cause of antibiotic-associated diarrhea in health care facilities in developed countries. Extended hospital stays and recurrences severely increase the cost of treatments and the high mortality rate that is observed among the elderly. Community-associated CDI cases that occur without any recent contact with the...

    Muthu Dharmasena, Xiuping Jiang
  • Food Microbiology
    Antimicrobial Resistance, Virulence Factors, and Genetic Profiles of Vibrio parahaemolyticus from Seafood

    The presence of V. parahaemolyticus in seafood may pose a risk for consumers, especially in countries where shellfish are eaten raw. In recent years, a significant increase of food poisoning caused by these bacteria has been also observed in Europe. Our results highlight the high level of V....

    Magdalena Lopatek, Kinga Wieczorek, Jacek Osek

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