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cellulose

  • <span class="named-content genus-species" id="named-content-1">Vibrio fischeri</span> Amidase Activity Is Required for Normal Cell Division, Motility, and Symbiotic Competence
    Microbial Ecology
    Vibrio fischeri Amidase Activity Is Required for Normal Cell Division, Motility, and Symbiotic Competence

    Peptidoglycan (PG) is a critical microbe-associated molecular pattern (MAMP) that is sloughed by cells of V. fischeri during symbiotic colonization of squid. Specifically, this process induces significant remodeling of a specialized symbiotic light organ within the squid mantle cavity.

    Pat M. Fidopiastis, Vanessa Mariscal, Jeanne-Marie McPherson, Sarah McAnulty, Anne Dunn, Eric V. Stabb, Karen L. Visick
  • A Need for Improved Cellulase Identification from Metagenomic Sequence Data
    Commentary
    A Need for Improved Cellulase Identification from Metagenomic Sequence Data

    Improved sequencing technologies and the maturation of metagenomic approaches allow the identification of gene variants with potential industrial applications, including cellulases. Cellulase identification from metagenomic environmental surveys is complicated by inconsistent nomenclature and multiple categorization systems. Here, we summarize the current classification and nomenclature systems, with recommendations for improvements to...

    Rebecca Co, Laura A. Hug
  • Quantitative Proteome Profiling Reveals Cellobiose-Dependent Protein Processing and Export Pathways for the Lignocellulolytic Response in <span class="named-content genus-species" id="named-content-1">Neurospora crassa</span>
    Biotechnology
    Quantitative Proteome Profiling Reveals Cellobiose-Dependent Protein Processing and Export Pathways for the Lignocellulolytic Response in Neurospora crassa

    Lignocellulases are important industrial enzymes for sustainable production of biofuels and bio-products. Insoluble cellulose has been commonly used to induce the production of lignocellulases in filamentous fungi, which causes a difficult fermentation operation and enzyme loss due to adsorption to cellulose. The disadvantages can be overcome by using soluble inducers, such as the disaccharide cellobiose. Quantitative proteome profiling...

    Dan Liu, Yisong Liu, Duoduo Zhang, Xiaoting Chen, Qian Liu, Bentao Xiong, Lihui Zhang, Linfang Wei, Yifan Wang, Hao Fang, Johannes Liesche, Yahong Wei, N. Louise Glass, Zhiqi Hao, Shaolin Chen
  • Proteomic Characterization of Lignocellulolytic Enzymes Secreted by the Insect-Associated Fungus <em>Daldinia decipiens</em> oita, Isolated from a Forest in Northern Japan
    Environmental Microbiology
    Proteomic Characterization of Lignocellulolytic Enzymes Secreted by the Insect-Associated Fungus Daldinia decipiens oita, Isolated from a Forest in Northern Japan

    Recent studies show the potential impacts of insect symbiont microbes on biofuel application with regard to their degradation capability of a recalcitrant plant cell wall. In this study, we describe a novel fungal isolate, D. decipiens oita, as a single symbiotic fungus from the Xiphydria woodwasp found in the northern forests of Japan. Our detailed secretome analyses of D. decipiens oita, together with...

    Chiaki Hori, Ruopu Song, Kazuki Matsumoto, Ruy Matsumoto, Benjamin B. Minkoff, Shuzo Oita, Hideho Hara, Taichi E. Takasuka
  • Methods
    Tools for Rapid Genetic Engineering of Vibrio fischeri
    Karen L. Visick, Kelsey M. Hodge-Hanson, Alice H. Tischler, Allison K. Bennett, Vincent Mastrodomenico
  • Biotechnology | Spotlight
    Functional Analysis of the Glucan Degradation Locus in Caldicellulosiruptor bescii Reveals Essential Roles of Component Glycoside Hydrolases in Plant Biomass Deconstruction
    Jonathan M. Conway, Bennett S. McKinley, Nathaniel L. Seals, Diana Hernandez, Piyum A. Khatibi, Suresh Poudel, Richard J. Giannone, Robert L. Hettich, Amanda M. Williams-Rhaesa, Gina L. Lipscomb, Michael W. W. Adams, Robert M. Kelly
  • Enzymology and Protein Engineering
    Chemical Pretreatment-Independent Saccharifications of Xylan and Cellulose of Rice Straw by Bacterial Weak Lignin-Binding Xylanolytic and Cellulolytic Enzymes
    Thitiporn Teeravivattanakit, Sirilak Baramee, Paripok Phitsuwan, Somphit Sornyotha, Rattiya Waeonukul, Patthra Pason, Chakrit Tachaapaikoon, Kanokwan Poomputsa, Akihiko Kosugi, Kazuo Sakka, Khanok Ratanakhanokchai
  • Genetics and Molecular Biology
    Revisiting the Regulation of the Primary Scaffoldin Gene in Clostridium thermocellum
    Lizett Ortiz de Ora, Iván Muñoz-Gutiérrez, Edward A. Bayer, Yuval Shoham, Raphael Lamed, Ilya Borovok
  • Microbial Ecology
    Polysaccharide Degradation Capability of Actinomycetales Soil Isolates from a Semiarid Grassland of the Colorado Plateau
    Chris M. Yeager, La Verne Gallegos-Graves, John Dunbar, Cedar N. Hesse, Hajnalka Daligault, Cheryl R. Kuske
  • Biodegradation
    Inactivation of Cellobiose Dehydrogenases Modifies the Cellulose Degradation Mechanism of Podospora anserina
    Narumon Tangthirasunun, David Navarro, Sona Garajova, Didier Chevret, Laetitia Chan Ho Tong, Valérie Gautier, Kevin D. Hyde, Philippe Silar, Jean-Guy Berrin

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