Skip to main content
  • ASM
    • Antimicrobial Agents and Chemotherapy
    • Applied and Environmental Microbiology
    • Clinical Microbiology Reviews
    • Clinical and Vaccine Immunology
    • EcoSal Plus
    • Eukaryotic Cell
    • Infection and Immunity
    • Journal of Bacteriology
    • Journal of Clinical Microbiology
    • Journal of Microbiology & Biology Education
    • Journal of Virology
    • mBio
    • Microbiology and Molecular Biology Reviews
    • Microbiology Resource Announcements
    • Microbiology Spectrum
    • Molecular and Cellular Biology
    • mSphere
    • mSystems
  • Log in
  • My alerts
  • My Cart

Main menu

  • Home
  • Articles
    • Current Issue
    • Accepted Manuscripts
    • COVID-19 Special Collection
    • Archive
    • Minireviews
  • For Authors
    • Submit a Manuscript
    • Scope
    • Editorial Policy
    • Submission, Review, & Publication Processes
    • Organization and Format
    • Errata, Author Corrections, Retractions
    • Illustrations and Tables
    • Nomenclature
    • Abbreviations and Conventions
    • Publication Fees
    • Ethics Resources and Policies
  • About the Journal
    • About AEM
    • Editor in Chief
    • Editorial Board
    • For Reviewers
    • For the Media
    • For Librarians
    • For Advertisers
    • Alerts
    • RSS
    • FAQ
  • Subscribe
    • Members
    • Institutions
  • ASM
    • Antimicrobial Agents and Chemotherapy
    • Applied and Environmental Microbiology
    • Clinical Microbiology Reviews
    • Clinical and Vaccine Immunology
    • EcoSal Plus
    • Eukaryotic Cell
    • Infection and Immunity
    • Journal of Bacteriology
    • Journal of Clinical Microbiology
    • Journal of Microbiology & Biology Education
    • Journal of Virology
    • mBio
    • Microbiology and Molecular Biology Reviews
    • Microbiology Resource Announcements
    • Microbiology Spectrum
    • Molecular and Cellular Biology
    • mSphere
    • mSystems

User menu

  • Log in
  • My alerts
  • My Cart

Search

  • Advanced search
Applied and Environmental Microbiology
publisher-logosite-logo

Advanced Search

  • Home
  • Articles
    • Current Issue
    • Accepted Manuscripts
    • COVID-19 Special Collection
    • Archive
    • Minireviews
  • For Authors
    • Submit a Manuscript
    • Scope
    • Editorial Policy
    • Submission, Review, & Publication Processes
    • Organization and Format
    • Errata, Author Corrections, Retractions
    • Illustrations and Tables
    • Nomenclature
    • Abbreviations and Conventions
    • Publication Fees
    • Ethics Resources and Policies
  • About the Journal
    • About AEM
    • Editor in Chief
    • Editorial Board
    • For Reviewers
    • For the Media
    • For Librarians
    • For Advertisers
    • Alerts
    • RSS
    • FAQ
  • Subscribe
    • Members
    • Institutions

poultry

  • Open Access
    Method for Measuring Phenotypic Colistin Resistance in <span class="named-content genus-species" id="named-content-1">Escherichia coli</span> Populations from Chicken Flocks
    Environmental Microbiology
    Method for Measuring Phenotypic Colistin Resistance in Escherichia coli Populations from Chicken Flocks

    Colistin (polymyxin E) is an antimicrobial with poor solubility in agar-based media, and therefore, broth microdilution is the only available method for determining phenotypic resistance. However, estimating colistin resistance in mixed Escherichia coli populations is laborious, since it requires individual colony isolation, identification, and susceptibility testing...

    Nguyen Thi Nhung, Nguyen Thi Phuong Yen, Nguyen Van Ky Thien, Nguyen Van Cuong, Bach Tuan Kiet, James Campbell, Guy Thwaites, Stephen Baker, Ronald B. Geskus, Juan Carrique-Mas
  • Active Packaging of Immobilized Zinc Oxide Nanoparticles Controls <span class="named-content genus-species" id="named-content-1">Campylobacter jejuni</span> in Raw Chicken Meat
    Food Microbiology
    Active Packaging of Immobilized Zinc Oxide Nanoparticles Controls Campylobacter jejuni in Raw Chicken Meat

    Prevalence of Campylobacter in raw poultry remains a major food microbiological safety challenge. Novel mitigation strategies are required to ensure the safety and quality of poultry products. Active food packaging can control pathogens without directly adding antimicrobials into the food matrix and extend the food’s shelf life. The functionalized absorbing pad with ZnO NPs developed in this study was able to inactivate...

    Mohammed J. Hakeem, Jinsong Feng, Azadeh Nilghaz, Luyao Ma, Hwai Chuin Seah, Michael E. Konkel, Xiaonan Lu
  • Open Access
    Microorganisms Move a Short Distance into an Almond Orchard from an Adjacent Upwind Poultry Operation
    Food Microbiology
    Microorganisms Move a Short Distance into an Almond Orchard from an Adjacent Upwind Poultry Operation

    The movement of microorganisms, including foodborne pathogens, from animal operations into adjacent plant crop-growing environments is not well characterized. This study provides evidence that dust and bioaerosols moved from a commercial poultry operation a short distance downwind into an almond orchard and altered the microbiome recovered from the leaves. These data provide growers with information they can use to assess food safety...

    Christopher G. Theofel, Thomas R. Williams, Eduardo Gutierrez, Gordon R. Davidson, Michele Jay-Russell, Linda J. Harris
  • Chicken Intestinal Mycobiome: Initial Characterization and Its Response to Bacitracin Methylene Disalicylate
    Microbial Ecology
    Chicken Intestinal Mycobiome: Initial Characterization and Its Response to Bacitracin Methylene Disalicylate

    The intestinal microbiota is critical to host physiology, metabolism, and health. However, the fungal community has been often overlooked. Recent studies in humans have highlighted the importance of the mycobiota in obesity and disease, making it imperative that we increase our understanding of the fungal community. The significance of this study is that we revealed the spatial and temporal changes of the mycobiota in the GI tract of...

    Kelsy Robinson, Yingping Xiao, Timothy J. Johnson, Binlong Chen, Qing Yang, Wentao Lyu, Jing Wang, Nicole Fansler, Sage Becker, Jing Liu, Hua Yang, Guolong Zhang
  • Genomic Landscape of <span class="named-content genus-species" id="named-content-1">Ornithobacterium rhinotracheale</span> in Commercial Turkey Production in the United States
    Environmental Microbiology
    Genomic Landscape of Ornithobacterium rhinotracheale in Commercial Turkey Production in the United States

    The whole-genome approach enhances our understanding of evolutionary relationships between clinical Ornithobacterium rhinotracheale isolates from different commercial turkey producers and allows for identification of genes associated with virulence, antimicrobial resistance, or mobile genetic elements that are often excluded using traditional typing methods....

    Emily A. Smith, Elizabeth A. Miller, Bonnie P. Weber, Jeannette Munoz Aguayo, Cristian Flores Figueroa, Jared Huisinga, Jill Nezworski, Michelle Kromm, Ben Wileman, Timothy J. Johnson
  • Chicken Meat-Associated Enterococci: Influence of Agricultural Antibiotic Use and Connection to the Clinic
    Food Microbiology
    Chicken Meat-Associated Enterococci: Influence of Agricultural Antibiotic Use and Connection to the Clinic

    Bacteria that contaminate food can serve as a conduit for moving drug resistance genes from farm to table to clinic. Our results show that chicken meat-associated isolates of Enterococcus are often multidrug resistant, closely related to pathogenic lineages, and harbor worrisome virulence factors. These drug-resistant agricultural isolates could thus represent important stepping stones in the evolution of enterococci into drug-...

    Abigail L. Manson, Daria Van Tyne, Timothy J. Straub, Sarah Clock, Michael Crupain, Urvashi Rangan, Michael S. Gilmore, Ashlee M. Earl
  • Competition between <span class="named-content genus-species" id="named-content-1">Escherichia coli</span> Populations with and without Plasmids Carrying a Gene Encoding Extended-Spectrum Beta-Lactamase in the Broiler Chicken Gut
    Microbial Ecology
    Competition between Escherichia coli Populations with and without Plasmids Carrying a Gene Encoding Extended-Spectrum Beta-Lactamase in the Broiler Chicken Gut

    Bacteria that produce extended-spectrum beta-lactamases are resistant to an important class of antimicrobials in human and veterinary medicine. Reduction in antibiotic use is expected to decrease the prevalence of resistance. However, resistance genes often lie on plasmids which can be copied and transferred to other bacteria by conjugation, so in vitro resistance was observed to increase in the absence of antimicrobials. We...

    Egil A. J. Fischer, Cindy M. Dierikx, Alieda van Essen-Zandbergen, Dik Mevius, Arjan Stegeman, Francisca C. Velkers, Don Klinkenberg
  • <span class="named-content genus-species" id="named-content-1">Salmonella enterica</span> subsp. <em>enterica</em> Serovar Heidelberg Food Isolates Associated with a Salmonellosis Outbreak Have Enhanced Stress Tolerance Capabilities
    Food Microbiology
    Salmonella enterica subsp. enterica Serovar Heidelberg Food Isolates Associated with a Salmonellosis Outbreak Have Enhanced Stress Tolerance Capabilities

    This study provides a deep analysis of the intrinsic stress tolerance and virulence capabilities of Salmonella Heidelberg that may have contributed to the length and severity of a recent salmonellosis outbreak. Additionally, this study provides a comprehensive analysis of the transcriptomic response of S. enterica strains to heat stress conditions and...

    Andrea J. Etter, Alyssa M. West, John L. Burnett, Sophie Tongyu Wu, Deklin R. Veenhuizen, Raeya A. Ogas, Haley F. Oliver
  • Spatial Distribution of <span class="named-content genus-species" id="named-content-1">Salmonella enterica</span> in Poultry Shed Environments Observed by Intensive Longitudinal Environmental Sampling
    Environmental Microbiology
    Spatial Distribution of Salmonella enterica in Poultry Shed Environments Observed by Intensive Longitudinal Environmental Sampling

    Routine epidemiological surveillance for salmonellae in poultry relies initially on environmental sampling. Intensive, spatially homogenous sampling, as conducted within this study, confirmed that the sampling methodology conducted within a poultry environment is a nontrivial part of sampling design. The frequency of sampling is especially important when the prevalence of Salmonella spp. is low. These factors must be taken into...

    Helen K. Crabb, Joanne Lee Allen, Joanne Maree Devlin, Colin Reginald Wilks, James Rudkin Gilkerson
  • Worldwide Epidemiology of <em>Salmonella</em> Serovars in Animal-Based Foods: a Meta-analysis
    Food Microbiology
    Worldwide Epidemiology of Salmonella Serovars in Animal-Based Foods: a Meta-analysis

    Salmonellosis is caused by Salmonella spp. and is the third leading cause of death among food-transmitted diseases. This pathogen is commonly disseminated in domestic and wild animals, and the infection’s symptoms are characterized by acute fever, nausea, abdominal pain, and diarrhea. The animals are the primary source of salmonellae, and animal-based foods are the main transmission route to humans. Therefore, data collected...

    Rafaela G. Ferrari, Denes K. A. Rosario, Adelino Cunha-Neto, Sérgio B. Mano, Eduardo E. S. Figueiredo, Carlos A. Conte-Junior

Pages

  • Next
  • 1
  • 2
  • 3
  • 4
Back to top

About

  • About AEM
  • Editor in Chief
  • Editorial Board
  • Policies
  • For Reviewers
  • For the Media
  • For Librarians
  • For Advertisers
  • Alerts
  • RSS
  • FAQ
  • Permissions
  • Journal Announcements

Authors

  • ASM Author Center
  • Submit a Manuscript
  • Article Types
  • Ethics
  • Contact Us

Follow #AppEnvMicro

@ASMicrobiology

       

ASM Journals

ASM journals are the most prominent publications in the field, delivering up-to-date and authoritative coverage of both basic and clinical microbiology.

About ASM | Contact Us | Press Room

 

ASM is a member of

Scientific Society Publisher Alliance

 

American Society for Microbiology
1752 N St. NW
Washington, DC 20036
Phone: (202) 737-3600

Copyright © 2021 American Society for Microbiology | Privacy Policy | Website feedback

 

Print ISSN: 0099-2240; Online ISSN: 1098-5336