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Applied and Environmental Microbiology
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rhizosphere-inhabiting microbes

  • Soil Characteristics Constrain the Response of Microbial Communities and Associated Hydrocarbon Degradation Genes during Phytoremediation
    Environmental Microbiology
    Soil Characteristics Constrain the Response of Microbial Communities and Associated Hydrocarbon Degradation Genes during Phytoremediation

    Polycyclic aromatic hydrocarbons (PAH) are a group of organic contaminants that pose a risk to ecosystems’ health. Phytoremediation is a promising biotechnology with the potential to restore PAH-contaminated soils. However, some limitations prevent it from becoming the remediation technology of reference, despite being environmentally friendlier than mainstream physicochemical alternatives. Recent reports suggest that the original soil...

    Sara Correa-García, Karelle Rheault, Julien Tremblay, Armand Séguin, Etienne Yergeau
  • Effects of Agricultural Management on Rhizosphere Microbial Structure and Function in Processing Tomato Plants
    Plant Microbiology
    Effects of Agricultural Management on Rhizosphere Microbial Structure and Function in Processing Tomato Plants

    Agriculture relies, in part, on close linkages between plants and the microorganisms that live in association with plant roots. These rhizosphere bacteria and fungi are distinct from microbial communities found in the rest of the soil and are even more important to plant nutrient uptake and health. Evidence from field studies shows that agricultural management practices such as fertilization and tillage shape microbial communities in...

    Jennifer E. Schmidt, Rachel L. Vannette, Alexandria Igwe, Rob Blundell, Clare L. Casteel, Amélie C. M. Gaudin
  • To Fix or Not To Fix: Controls on Free-Living Nitrogen Fixation in the Rhizosphere
    Minireview
    To Fix or Not To Fix: Controls on Free-Living Nitrogen Fixation in the Rhizosphere

    Free-living nitrogen fixation (FLNF) in the rhizosphere, or N fixation by heterotrophic bacteria living on/near root surfaces, is ubiquitous and a significant source of N in some terrestrial systems. FLNF is also of interest in crop production as an alternative to chemical fertilizer, potentially reducing production costs and ameliorating negative environmental impacts of fertilizer N additions.

    Darian N. Smercina, Sarah E. Evans, Maren L. Friesen, Lisa K. Tiemann
  • Microbial Ecology
    Impacts of Repeated Glyphosate Use on Wheat-Associated Bacteria Are Small and Depend on Glyphosate Use History
    Daniel C. Schlatter, Chuntao Yin, Scot Hulbert, Ian Burke, Timothy Paulitz
  • Plant Microbiology
    Pseudomonas chlororaphis Produces Two Distinct R-Tailocins That Contribute to Bacterial Competition in Biofilms and on Roots
    Robert J. Dorosky, Jun Myoung Yu, Leland S. Pierson, Elizabeth A. Pierson
  • Open Access
    Microbial Ecology
    Global-Scale Structure of the Eelgrass Microbiome
    Ashkaan K. Fahimipour, Melissa R. Kardish, Jenna M. Lang, Jessica L. Green, Jonathan A. Eisen, John J. Stachowicz
  • Plant Microbiology
    The Influence of the Host Plant Is the Major Ecological Determinant of the Presence of Nitrogen-Fixing Root Nodule Symbiont Cluster II Frankia Species in Soil
    Kai Battenberg, Jannah A. Wren, Janell Hillman, Joseph Edwards, Liujing Huang, Alison M. Berry
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