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Applied and Environmental Microbiology
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Latest Articles

  • Open Access
    Genomic Insights into Methicillin-Resistant <span class="named-content genus-species" id="named-content-1">Staphylococcus aureus</span> <em>spa</em> Type t899 Isolates Belonging to Different Sequence Types
    Evolutionary and Genomic Microbiology
    Genomic Insights into Methicillin-Resistant Staphylococcus aureus spa Type t899 Isolates Belonging to Different Sequence Types

    This study showed the genetic diversity and population structure of S. aureus presenting the same spa type, t899, but belonging to different STs. Our findings revealed that these isolates vary deeply in their core and accessory genomes, contrary to what is regularly inferred from studies using spa typing only.

    Henok Ayalew Tegegne, Ivana Koláčková, Martina Florianová, Pierre Wattiau, Tereza Gelbíčová, Cécile Boland, Jean-Yves Madec, Marisa Haenni, Renáta Karpíšková
  • Control of Competence in <span class="named-content genus-species" id="named-content-1">Vibrio fischeri</span>
    Genetics and Molecular Biology
    Control of Competence in Vibrio fischeri

    The ability of bacteria to take up DNA (competence) and incorporate foreign DNA into their genomes (transformation) permits them to rapidly evolve and gain new traits and/or acquire antibiotic resistances. It also facilitates laboratory-based investigations into mechanisms of specific phenotypes, such as those involved in host colonization. Vibrio fischeri has long...

    Joshua J. Cohen, Steven J. Eichinger, Danae A. Witte, Connor J. Cook, Pat M. Fidopiastis, Jovanka Tepavčević, Karen L. Visick
  • Nature versus Nurture: Assessing the Impact of Strain Diversity and Pregrowth Conditions on <span class="named-content genus-species" id="named-content-1">Salmonella enterica</span>, <span class="named-content genus-species" id="named-content-2">Escherichia coli</span>, and <em>Listeria</em> Species Growth and Survival on Selected Produce Items
    Food Microbiology | Spotlight
    Nature versus Nurture: Assessing the Impact of Strain Diversity and Pregrowth Conditions on Salmonella enterica, Escherichia coli, and Listeria Species Growth and Survival on Selected Produce Items

    Our findings suggest that inclusion of multiple pregrowth conditions in inoculation studies can best capture the range of growth and survival patterns expected for Salmonella enterica and Escherichia coli present on produce. This is particularly important for fresh and fresh-cut produce, where...

    Anna Sophia Harrand, Veronica Guariglia-Oropeza, Jordan Skeens, David Kent, Martin Wiedmann
  • Structural and Biochemical Analysis Reveals a Distinct Catalytic Site of Salicylate 5-Monooxygenase NagGH from Rieske Dioxygenases
    Enzymology and Protein Engineering
    Structural and Biochemical Analysis Reveals a Distinct Catalytic Site of Salicylate 5-Monooxygenase NagGH from Rieske Dioxygenases

    Rieske oxygenases are involved in the degradation of various aromatic compounds. These dioxygenases usually carry out hydroxylation of hydrophobic aromatic compounds and supply substrates with hydroxyl groups for extradiol/intradiol dioxygenases to cleave rings, and have been extensively studied. Salicylate 5-hydroxylase NagGH is a novel Rieske monooxygenase with high similarity to Rieske dioxygenases, and also shares reductase and...

    Yan-Jie Hou, Yuan Guo, De-Feng Li, Ning-Yi Zhou
  • Reduced Antibacterial Drug Resistance and <em>bla</em><sub>CTX-M</sub> β-Lactamase Gene Carriage in Cattle-Associated <span class="named-content genus-species" id="named-content-1">Escherichia coli</span> at Low Temperatures, at Sites Dominated by Older Animals, and on Pastureland: Implications for Surveillance
    Public and Environmental Health Microbiology
    Reduced Antibacterial Drug Resistance and blaCTX-M β-Lactamase Gene Carriage in Cattle-Associated Escherichia coli at Low Temperatures, at Sites Dominated by Older Animals, and on Pastureland: Implications for Surveillance

    Antibacterial resistance poses a significant threat to human and animal health and global food security. Surveillance for resistance on farms is important for many reasons, including tracking impacts of interventions aimed at reducing the prevalence of resistance.

    Hannah Schubert, Katy Morley, Emma F. Puddy, Robert Arbon, Jacqueline Findlay, Oliver Mounsey, Virginia C. Gould, Lucy Vass, Madeleine Evans, Gwen M. Rees, David C. Barrett, Katy M. Turner, Tristan A. Cogan, Matthew B. Avison, Kristen K. Reyher
  • Free
    Articles of Significant Interest in This Issue
    Spotlight
    Articles of Significant Interest in This Issue
  • Environmental Microbiology
    Type VI secretion system facilitates fitness, homeostasis, and competitive advantages for environmental adaptability and efficient nicotine biodegradation
    Jun Li, Linlin Xie, Shulan Qian, Yuhang Tang, Mingjie Shen, Shanshan Li, Jie Wang, Lie Xiong, Jie Lu, Weihong Zhong
  • Plant Microbiology
    Production of Candicidin Isomers Is Essential for Biocontrol of Cucumber Rhizoctonia rot By Streptomyces albidoflavus W68
    Xueyan Yao, Zhenying Zhang, Jun Huang, Shiping Wei, Xianyun Sun, Yihua Chen, Hongwei Liu, Shaojie Li
  • Food Microbiology
    Transcriptome analysis of Listeria monocytogenes exposed to beef fat reveals antimicrobial and pathogenicity attenuation mechanisms
    Yuan Yao Chen, Arun Kommadath, Payam Vahmani, Jeyachchandran Visvalingam, Michael E. R. Dugan, Xianqin Yang
  • Open Access
    Biotechnology
    Laboratory evolution and reverse engineering of Clostridium thermocellum for growth on glucose and fructose
    Johannes Yayo, Teun Kuil, Daniel G. Olson, Lee R. Lynd, Evert K. Holwerda, Antonius J. A. van Maris

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